RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	NHS	Q6T4R5	1651 aa		12.15	□□□□□ -0.46
UBE2F-222	ENST00000482096		A0A1W2PP64	1363 aa		12.15	□□□□□ -0.46
UBE2F-222	ENST00000482096	PLCG2	P16885	1265 aa		12.14	□□□□□ -0.47
UBE2F-222	ENST00000482096	DPY19L2	Q6NUT2	758 aa		12.14	□□□□□ -0.47
UBE2F-222	ENST00000482096	LRRC4B	Q9NT99	713 aa		12.14	□□□□□ -0.47
UBE2F-222	ENST00000482096	METRN	Q9UJH8	293 aa		12.14	□□□□□ -0.47
UBE2F-222	ENST00000482096	COLQ	Q9Y215	455 aa	Predicted RBP	12.14	□□□□□ -0.47
UBE2F-222	ENST00000482096	MYOM1	P52179	1685 aa		12.13	□□□□□ -0.47
UBE2F-222	ENST00000482096	SEC24B	O95487	1268 aa		12.13	□□□□□ -0.47
UBE2F-222	ENST00000482096	ZNF827	Q17R98	1081 aa		12.13	□□□□□ -0.47
UBE2F-222	ENST00000482096	ARX	Q96QS3	562 aa		12.13	□□□□□ -0.47
UBE2F-222	ENST00000482096	OCEL1	Q9H607	264 aa		12.13	□□□□□ -0.47
UBE2F-222	ENST00000482096	TESK2	Q96S53	571 aa		12.12	□□□□□ -0.47
UBE2F-222	ENST00000482096	PAPPA	Q13219	1627 aa		12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	TONSL	Q96HA7	1378 aa		12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	MAP3K5	Q99683	1374 aa		12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	C7	P10643	843 aa		12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	SLC27A3	Q5K4L6	730 aa		12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	DDX54	Q8TDD1	881 aa	Known RBP	12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	SLC16A10	Q8TF71	515 aa		12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	LTV1	Q96GA3	475 aa	Predicted RBP	12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	COG3	Q96JB2	828 aa		12.11	□□□□□ -0.47
UBE2F-222	ENST00000482096	LTN1	O94822	1766 aa		12.1	□□□□□ -0.47
UBE2F-222	ENST00000482096	POTEF	A5A3E0	1075 aa		12.1	□□□□□ -0.47
UBE2F-222	ENST00000482096	HOXC9	P31274	260 aa		12.1	□□□□□ -0.47
UBE2F-222	ENST00000482096	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.1	□□□□□ -0.47
UBE2F-222	ENST00000482096	MAP3K19	Q56UN5	1328 aa		12.1	□□□□□ -0.47
UBE2F-222	ENST00000482096	ST20-MTHFS	A0A0A6YYL1	179 aa		12.09	□□□□□ -0.47
UBE2F-222	ENST00000482096	BTAF1	O14981	1849 aa		12.09	□□□□□ -0.47
UBE2F-222	ENST00000482096	FBLN1	P23142	703 aa		12.08	□□□□□ -0.48
UBE2F-222	ENST00000482096	AMPH	P49418	695 aa		12.08	□□□□□ -0.48
UBE2F-222	ENST00000482096	PRIM1	P49642	420 aa	Known RBP	12.08	□□□□□ -0.48
UBE2F-222	ENST00000482096	ZCRB1	Q8TBF4	217 aa	Known RBP	12.08	□□□□□ -0.48
UBE2F-222	ENST00000482096	ANKRD36B	Q8N2N9	1353 aa		12.07	□□□□□ -0.48
UBE2F-222	ENST00000482096	SYTL4	Q96C24	671 aa	Predicted RBP	12.07	□□□□□ -0.48
UBE2F-222	ENST00000482096	PNPLA7	Q6ZV29	1317 aa		12.07	□□□□□ -0.48
UBE2F-222	ENST00000482096	POLD1	P28340	1107 aa		12.06	□□□□□ -0.48
UBE2F-222	ENST00000482096	TFCP2L1	Q9NZI6	479 aa		12.06	□□□□□ -0.48
UBE2F-222	ENST00000482096	KAT6B	Q8WYB5	2073 aa		12.06	□□□□□ -0.48
UBE2F-222	ENST00000482096	NSD2	O96028	1365 aa		12.05	□□□□□ -0.48
UBE2F-222	ENST00000482096	FYB1	O15117	783 aa		12.05	□□□□□ -0.48
UBE2F-222	ENST00000482096	KCNQ4	P56696	695 aa		12.05	□□□□□ -0.48
UBE2F-222	ENST00000482096	NBPF6	Q5VWK0	638 aa		12.05	□□□□□ -0.48
UBE2F-222	ENST00000482096	NBPF4	Q96M43	638 aa		12.05	□□□□□ -0.48
UBE2F-222	ENST00000482096	FAM208A	Q9UK61	1670 aa	Known RBP	12.05	□□□□□ -0.48
UBE2F-222	ENST00000482096	RTL1	A6NKG5	1358 aa		12.05	□□□□□ -0.48
UBE2F-222	ENST00000482096	RRS1	Q15050	365 aa	Known RBP	12.04	□□□□□ -0.48
UBE2F-222	ENST00000482096	GPR162	Q16538	588 aa		12.04	□□□□□ -0.48
UBE2F-222	ENST00000482096	MEGF6	O75095	1541 aa		12.04	□□□□□ -0.48
UBE2F-222	ENST00000482096	CGNL1	Q0VF96	1302 aa		12.04	□□□□□ -0.48
UBE2F-222	ENST00000482096	GGNBP2	Q9H3C7	697 aa		12.03	□□□□□ -0.48
UBE2F-222	ENST00000482096	CCNL1	Q9UK58	526 aa	Predicted RBP	12.03	□□□□□ -0.48
UBE2F-222	ENST00000482096	TMF1	P82094	1093 aa		12.02	□□□□□ -0.49
UBE2F-222	ENST00000482096	RAPGEF4	Q8WZA2	1011 aa		12.02	□□□□□ -0.49
UBE2F-222	ENST00000482096	USP47	Q96K76	1375 aa		12.02	□□□□□ -0.49
UBE2F-222	ENST00000482096	QSER1	Q2KHR3	1735 aa		12.01	□□□□□ -0.49
UBE2F-222	ENST00000482096	MICALL2	Q8IY33	904 aa		12.01	□□□□□ -0.49
UBE2F-222	ENST00000482096	USHBP1	Q8N6Y0	703 aa		12.01	□□□□□ -0.49
UBE2F-222	ENST00000482096	BOLA1	Q9Y3E2	137 aa		12.01	□□□□□ -0.49
UBE2F-222	ENST00000482096	UTRN	P46939	3433 aa		12.01	□□□□□ -0.49
UBE2F-222	ENST00000482096	COL24A1	Q17RW2	1714 aa		12	□□□□□ -0.49
UBE2F-222	ENST00000482096	TAT	P17735	454 aa	Predicted RBP	12	□□□□□ -0.49
UBE2F-222	ENST00000482096	HSP90AB2P	Q58FF8	381 aa		12	□□□□□ -0.49
UBE2F-222	ENST00000482096	COL23A1	Q86Y22	540 aa	Predicted RBP	12	□□□□□ -0.49
UBE2F-222	ENST00000482096	VSIG10	Q8N0Z9	540 aa		12	□□□□□ -0.49
UBE2F-222	ENST00000482096	NLGN2	Q8NFZ4	835 aa		12	□□□□□ -0.49
UBE2F-222	ENST00000482096	INSR	P06213	1382 aa		12	□□□□□ -0.49
UBE2F-222	ENST00000482096	SMG6	Q86US8	1419 aa	Known RBP	12	□□□□□ -0.49
UBE2F-222	ENST00000482096	DOT1L	Q8TEK3	1739 aa		12	□□□□□ -0.49
UBE2F-222	ENST00000482096	CHD4	Q14839	1912 aa		11.99	□□□□□ -0.49
UBE2F-222	ENST00000482096		G3V3G9	751 aa		11.99	□□□□□ -0.49
UBE2F-222	ENST00000482096	HMGB2	P26583	209 aa	Known RBP	11.99	□□□□□ -0.49
UBE2F-222	ENST00000482096	C1QTNF8	P60827	252 aa		11.99	□□□□□ -0.49
UBE2F-222	ENST00000482096	KIF24	Q5T7B8	1368 aa		11.99	□□□□□ -0.49
UBE2F-222	ENST00000482096	LY75	O60449	1722 aa		11.99	□□□□□ -0.49
UBE2F-222	ENST00000482096	SHANK3	Q9BYB0	1731 aa		11.99	□□□□□ -0.49
UBE2F-222	ENST00000482096	RGPD2	P0DJD1	1756 aa		11.98	□□□□□ -0.49
UBE2F-222	ENST00000482096	FLT4	P35916	1363 aa		11.98	□□□□□ -0.49
UBE2F-222	ENST00000482096	PCDH11X	Q9BZA7	1347 aa		11.98	□□□□□ -0.49
UBE2F-222	ENST00000482096	PCDH11Y	Q9BZA8	1340 aa		11.98	□□□□□ -0.49
UBE2F-222	ENST00000482096	CDCA8	Q53HL2	280 aa		11.98	□□□□□ -0.49
UBE2F-222	ENST00000482096	CYP27B1	O15528	508 aa		11.97	□□□□□ -0.49
UBE2F-222	ENST00000482096	GRIN3B	O60391	1043 aa		11.97	□□□□□ -0.49
UBE2F-222	ENST00000482096	FLAD1	Q8NFF5	587 aa		11.97	□□□□□ -0.49
UBE2F-222	ENST00000482096	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.97	□□□□□ -0.49
UBE2F-222	ENST00000482096	TUBGCP6	Q96RT7	1819 aa		11.96	□□□□□ -0.49
UBE2F-222	ENST00000482096	SENP3-EIF4A1	A0A087X0R7	540 aa		11.96	□□□□□ -0.49
UBE2F-222	ENST00000482096	CARD14	Q9BXL6	1004 aa		11.96	□□□□□ -0.49
UBE2F-222	ENST00000482096	PALLD	Q8WX93	1383 aa		11.95	□□□□□ -0.5
UBE2F-222	ENST00000482096	YBX3	P16989	372 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
UBE2F-222	ENST00000482096	MSL1	Q68DK7	614 aa		11.95	□□□□□ -0.5
UBE2F-222	ENST00000482096	MPRIP	Q6WCQ1	1025 aa		11.95	□□□□□ -0.5
UBE2F-222	ENST00000482096	SMARCC1	Q92922	1105 aa	Predicted RBP	11.95	□□□□□ -0.5
UBE2F-222	ENST00000482096	EMILIN1	Q9Y6C2	1016 aa		11.95	□□□□□ -0.5
UBE2F-222	ENST00000482096	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.94	□□□□□ -0.5
UBE2F-222	ENST00000482096	CD2AP	Q9Y5K6	639 aa		11.94	□□□□□ -0.5
UBE2F-222	ENST00000482096	GIGYF1	O75420	1035 aa	Predicted RBP	11.93	□□□□□ -0.5
UBE2F-222	ENST00000482096	NCAPD2	Q15021	1401 aa		11.93	□□□□□ -0.5
UBE2F-222	ENST00000482096	PIGB	Q92521	554 aa		11.92	□□□□□ -0.5
UBE2F-222	ENST00000482096	SPG7	Q9UQ90	795 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms