RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 FLIIQ13045 1269 aa18.86■□□□□ 0.61
C9orf3-218ENST00000482056 FKBP5Q13451 457 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-218ENST00000482056 MAP3K5Q99683 1374 aa18.85■□□□□ 0.61
C9orf3-218ENST00000482056 N4BP2Q86UW6 1770 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-218ENST00000482056 HOXC9P31274 260 aa18.84■□□□□ 0.61
C9orf3-218ENST00000482056 PANK2Q9BZ23 570 aa18.84■□□□□ 0.61
C9orf3-218ENST00000482056 LRRCC1Q9C099 1032 aa18.84■□□□□ 0.61
C9orf3-218ENST00000482056 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
C9orf3-218ENST00000482056 BAG4O95429 457 aaKnown RBP18.83■□□□□ 0.61
C9orf3-218ENST00000482056 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-218ENST00000482056 FER1L4A9Z1Z3 1794 aa18.82■□□□□ 0.6
C9orf3-218ENST00000482056 MCCP23508 829 aa18.82■□□□□ 0.6
C9orf3-218ENST00000482056 ATP8B2P98198 1209 aa18.82■□□□□ 0.6
C9orf3-218ENST00000482056 TAF7Q15545 349 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-218ENST00000482056 KLHL40Q2TBA0 621 aa18.82■□□□□ 0.6
C9orf3-218ENST00000482056 SRCIN1Q9C0H9 1055 aa18.82■□□□□ 0.6
C9orf3-218ENST00000482056 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-218ENST00000482056 CHMP4AQ9BY43 222 aa18.81■□□□□ 0.6
C9orf3-218ENST00000482056 RRAGDQ9NQL2 400 aaPredicted RBP18.81■□□□□ 0.6
C9orf3-218ENST00000482056 EXOC6BQ9Y2D4 811 aa18.81■□□□□ 0.6
C9orf3-218ENST00000482056 DDX49Q9Y6V7 483 aaKnown RBP18.81■□□□□ 0.6
C9orf3-218ENST00000482056 MARF1Q9Y4F3 1742 aaKnown RBP18.8■□□□□ 0.6
C9orf3-218ENST00000482056 MX1P20591 662 aa18.8■□□□□ 0.6
C9orf3-218ENST00000482056 NWD1Q149M9 1564 aa18.79■□□□□ 0.6
C9orf3-218ENST00000482056 MCM2P49736 904 aa18.79■□□□□ 0.6
C9orf3-218ENST00000482056 ABTB2Q8N961 1025 aa18.79■□□□□ 0.6
C9orf3-218ENST00000482056 AK9Q5TCS8 1911 aa18.79■□□□□ 0.6
C9orf3-218ENST00000482056 TUBGCP6Q96RT7 1819 aa18.78■□□□□ 0.6
C9orf3-218ENST00000482056 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-218ENST00000482056 AOX1Q06278 1338 aa18.78■□□□□ 0.6
C9orf3-218ENST00000482056 SALL3Q9BXA9 1300 aa18.78■□□□□ 0.6
C9orf3-218ENST00000482056 UBTFL1P0CB47 393 aaPredicted RBP18.77■□□□□ 0.6
C9orf3-218ENST00000482056 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
C9orf3-218ENST00000482056 ESYT1Q9BSJ8 1104 aa18.77■□□□□ 0.6
C9orf3-218ENST00000482056 MCTP1Q6DN14 999 aa18.77■□□□□ 0.59
C9orf3-218ENST00000482056 NECTIN2Q92692 538 aa18.77■□□□□ 0.59
C9orf3-218ENST00000482056 TRIM44Q96DX7 344 aaPredicted RBP18.77■□□□□ 0.59
C9orf3-218ENST00000482056 STAP2Q9UGK3 403 aa18.77■□□□□ 0.59
C9orf3-218ENST00000482056 ANAPC15P60006 121 aa18.76■□□□□ 0.59
C9orf3-218ENST00000482056 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
C9orf3-218ENST00000482056 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
C9orf3-218ENST00000482056 ANP32BQ92688 251 aaKnown RBP18.76■□□□□ 0.59
C9orf3-218ENST00000482056 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.76■□□□□ 0.59
C9orf3-218ENST00000482056 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
C9orf3-218ENST00000482056 PNMA6EA0A0J9YXQ4 647 aa18.75■□□□□ 0.59
C9orf3-218ENST00000482056 HDGFL1Q5TGJ6 251 aa18.75■□□□□ 0.59
C9orf3-218ENST00000482056 LTV1Q96GA3 475 aaPredicted RBP18.75■□□□□ 0.59
C9orf3-218ENST00000482056 TRIM6-TRIM34B2RNG4 842 aa18.75■□□□□ 0.59
C9orf3-218ENST00000482056 KCNA6P17658 529 aa18.75■□□□□ 0.59
C9orf3-218ENST00000482056 CLCN1P35523 988 aa18.75■□□□□ 0.59
C9orf3-218ENST00000482056 GAS2L3Q86XJ1 694 aa18.75■□□□□ 0.59
C9orf3-218ENST00000482056 RAB11FIP3O75154 756 aa18.74■□□□□ 0.59
C9orf3-218ENST00000482056 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
C9orf3-218ENST00000482056 LTN1O94822 1766 aa18.74■□□□□ 0.59
C9orf3-218ENST00000482056 NEK4P51957 841 aa18.73■□□□□ 0.59
C9orf3-218ENST00000482056 RILPL2Q969X0 211 aa18.73■□□□□ 0.59
C9orf3-218ENST00000482056 EPB41L2O43491 1005 aaKnown RBP18.73■□□□□ 0.59
C9orf3-218ENST00000482056 CHMLP26374 656 aa18.73■□□□□ 0.59
C9orf3-218ENST00000482056 HOXB7P09629 217 aa18.72■□□□□ 0.59
C9orf3-218ENST00000482056 USP44Q9H0E7 712 aa18.72■□□□□ 0.59
C9orf3-218ENST00000482056 CCDC173Q0VFZ6 552 aa18.72■□□□□ 0.59
C9orf3-218ENST00000482056 ZGPATQ8N5A5 531 aaKnown RBP18.72■□□□□ 0.59
C9orf3-218ENST00000482056 SSH3Q8TE77 659 aa18.72■□□□□ 0.59
C9orf3-218ENST00000482056 PHF8Q9UPP1 1060 aa18.72■□□□□ 0.59
C9orf3-218ENST00000482056 ZNF445P59923 1031 aa18.71■□□□□ 0.59
C9orf3-218ENST00000482056 TSHZ3Q63HK5 1081 aa18.71■□□□□ 0.59
C9orf3-218ENST00000482056 IP6K1Q92551 441 aa18.71■□□□□ 0.59
C9orf3-218ENST00000482056 ANO2Q9NQ90 1003 aa18.71■□□□□ 0.59
C9orf3-218ENST00000482056 LMBRD1Q9NUN5 540 aa18.71■□□□□ 0.59
C9orf3-218ENST00000482056 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
C9orf3-218ENST00000482056 NASPP49321 788 aaPredicted RBP18.7■□□□□ 0.58
C9orf3-218ENST00000482056 CEMIPQ8WUJ3 1361 aa18.7■□□□□ 0.58
C9orf3-218ENST00000482056 TMX3Q96JJ7 454 aa18.7■□□□□ 0.58
C9orf3-218ENST00000482056 ESPNB1AK53 854 aa18.69■□□□□ 0.58
C9orf3-218ENST00000482056 PKP1Q13835 747 aa18.68■□□□□ 0.58
C9orf3-218ENST00000482056 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
C9orf3-218ENST00000482056 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
C9orf3-218ENST00000482056 IL17RAQ96F46 866 aa18.68■□□□□ 0.58
C9orf3-218ENST00000482056 INTS4Q96HW7 963 aaKnown RBP18.68■□□□□ 0.58
C9orf3-218ENST00000482056 MED1Q15648 1581 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-218ENST00000482056 CAVIN1Q6NZI2 390 aaKnown RBP18.68■□□□□ 0.58
C9orf3-218ENST00000482056 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
C9orf3-218ENST00000482056 KDM3BQ7LBC6 1761 aa18.67■□□□□ 0.58
C9orf3-218ENST00000482056 SURF6O75683 361 aaKnown RBP18.67■□□□□ 0.58
C9orf3-218ENST00000482056 CUL4AQ13619 759 aa18.67■□□□□ 0.58
C9orf3-218ENST00000482056 POLA2Q14181 598 aa18.67■□□□□ 0.58
C9orf3-218ENST00000482056 PHAXQ9H814 394 aaKnown RBP18.67■□□□□ 0.58
C9orf3-218ENST00000482056 ADGRL3Q9HAR2 1447 aa18.67■□□□□ 0.58
C9orf3-218ENST00000482056 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
C9orf3-218ENST00000482056 ZSCAN23Q3MJ62 389 aa18.66■□□□□ 0.58
C9orf3-218ENST00000482056 PPP1R42Q7Z4L9 355 aa18.66■□□□□ 0.58
C9orf3-218ENST00000482056 KIF1BPQ96EK5 621 aa18.66■□□□□ 0.58
C9orf3-218ENST00000482056 NFAT5O94916 1531 aa18.66■□□□□ 0.58
C9orf3-218ENST00000482056 PRPF40AO75400 957 aaKnown RBP18.66■□□□□ 0.58
C9orf3-218ENST00000482056 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
C9orf3-218ENST00000482056 PPP1R9BQ96SB3 815 aa18.66■□□□□ 0.58
C9orf3-218ENST00000482056 CHD2O14647 1828 aaKnown RBP18.65■□□□□ 0.58
C9orf3-218ENST00000482056 LMO7Q8WWI1 1683 aa18.65■□□□□ 0.58
C9orf3-218ENST00000482056 TEFQ10587 303 aa18.65■□□□□ 0.58
C9orf3-218ENST00000482056 RHPN1Q8TCX5 695 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms