RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-205	ENST00000481788	LRCH3	Q96II8	777 aa		10.14	□□□□□ -0.79
RBM28-205	ENST00000481788	FAM198A	Q9UFP1	575 aa		10.14	□□□□□ -0.79
RBM28-205	ENST00000481788	ANKAR	Q7Z5J8	1434 aa		10.14	□□□□□ -0.79
RBM28-205	ENST00000481788	SPATA31A1	Q5TZJ5	1347 aa		10.13	□□□□□ -0.79
RBM28-205	ENST00000481788	ALS2	Q96Q42	1657 aa		10.13	□□□□□ -0.79
RBM28-205	ENST00000481788		A0A0G2JS52	829 aa		10.13	□□□□□ -0.79
RBM28-205	ENST00000481788	SOWAHB	A6NEL2	793 aa		10.13	□□□□□ -0.79
RBM28-205	ENST00000481788	MYT1	Q01538	1121 aa		10.13	□□□□□ -0.79
RBM28-205	ENST00000481788	NUDT18	Q6ZVK8	323 aa		10.13	□□□□□ -0.79
RBM28-205	ENST00000481788	C14orf93	Q9H972	538 aa	Known RBP	10.13	□□□□□ -0.79
RBM28-205	ENST00000481788	COL14A1	Q05707	1796 aa	Known RBP	10.13	□□□□□ -0.79
RBM28-205	ENST00000481788	CRYBG1	Q9Y4K1	1723 aa		10.13	□□□□□ -0.79
RBM28-205	ENST00000481788	RREB1	Q92766	1687 aa		10.12	□□□□□ -0.79
RBM28-205	ENST00000481788	PRR36	Q9H6K5	1346 aa		10.12	□□□□□ -0.79
RBM28-205	ENST00000481788	SMAP	O00193	183 aa		10.12	□□□□□ -0.79
RBM28-205	ENST00000481788	HIC1	Q14526	733 aa		10.12	□□□□□ -0.79
RBM28-205	ENST00000481788	FAM196A	Q6ZSG2	479 aa		10.12	□□□□□ -0.79
RBM28-205	ENST00000481788	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM28-205	ENST00000481788	ADGRB2	O60241	1585 aa		10.12	□□□□□ -0.79
RBM28-205	ENST00000481788	NINL	Q9Y2I6	1382 aa		10.12	□□□□□ -0.79
RBM28-205	ENST00000481788	ACIN1	Q9UKV3	1341 aa	Known RBP	10.11	□□□□□ -0.79
RBM28-205	ENST00000481788	IFT172	Q9UG01	1749 aa		10.11	□□□□□ -0.79
RBM28-205	ENST00000481788	LMOD2	Q6P5Q4	547 aa		10.11	□□□□□ -0.79
RBM28-205	ENST00000481788	PMFBP1	Q8TBY8	1022 aa		10.11	□□□□□ -0.79
RBM28-205	ENST00000481788	RGPD8	O14715	1765 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM28-205	ENST00000481788	NUP188	Q5SRE5	1749 aa		10.1	□□□□□ -0.79
RBM28-205	ENST00000481788	APBA3	O96018	575 aa		10.1	□□□□□ -0.79
RBM28-205	ENST00000481788	BCAM	P50895	628 aa		10.1	□□□□□ -0.79
RBM28-205	ENST00000481788	NYAP1	Q6ZVC0	841 aa		10.1	□□□□□ -0.79
RBM28-205	ENST00000481788	GPIHBP1	Q8IV16	184 aa		10.1	□□□□□ -0.79
RBM28-205	ENST00000481788	DLC1	Q96QB1	1528 aa		10.09	□□□□□ -0.79
RBM28-205	ENST00000481788	SLC4A3	P48751	1232 aa		10.09	□□□□□ -0.79
RBM28-205	ENST00000481788	RGL3	Q3MIN7	710 aa		10.09	□□□□□ -0.79
RBM28-205	ENST00000481788	RBM46	Q8TBY0	533 aa	Known RBP	10.09	□□□□□ -0.79
RBM28-205	ENST00000481788	PRAM1	Q96QH2	718 aa		10.09	□□□□□ -0.79
RBM28-205	ENST00000481788	CEP350	Q5VT06	3117 aa		10.09	□□□□□ -0.79
RBM28-205	ENST00000481788	KCNQ2	O43526	872 aa		10.08	□□□□□ -0.8
RBM28-205	ENST00000481788	CFAP70	Q5T0N1	1121 aa		10.08	□□□□□ -0.8
RBM28-205	ENST00000481788	BARGIN	Q6ZT62	677 aa		10.08	□□□□□ -0.8
RBM28-205	ENST00000481788	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.08	□□□□□ -0.8
RBM28-205	ENST00000481788	SPON1	Q9HCB6	807 aa		10.08	□□□□□ -0.8
RBM28-205	ENST00000481788	TSR3	Q9UJK0	312 aa	Known RBP	10.08	□□□□□ -0.8
RBM28-205	ENST00000481788	KIAA0232	Q92628	1395 aa		10.08	□□□□□ -0.8
RBM28-205	ENST00000481788	ADGRB1	O14514	1584 aa		10.07	□□□□□ -0.8
RBM28-205	ENST00000481788	GNPAT	O15228	680 aa		10.07	□□□□□ -0.8
RBM28-205	ENST00000481788	SAMD7	Q7Z3H4	446 aa		10.07	□□□□□ -0.8
RBM28-205	ENST00000481788	PRDM11	Q9NQV5	511 aa		10.07	□□□□□ -0.8
RBM28-205	ENST00000481788	CAMTA1	Q9Y6Y1	1673 aa		10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	DHX57	Q6P158	1386 aa	Known RBP	10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	C3orf80	F5H4A9	247 aa		10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	CHRNA2	Q15822	529 aa		10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	NECTIN2	Q92692	538 aa		10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	HPS5	Q9UPZ3	1129 aa		10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	SSH2	Q76I76	1423 aa		10.06	□□□□□ -0.8
RBM28-205	ENST00000481788	GPRASP1	Q5JY77	1395 aa		10.05	□□□□□ -0.8
RBM28-205	ENST00000481788	EYA1	Q99502	592 aa		10.05	□□□□□ -0.8
RBM28-205	ENST00000481788	ADGRG1	Q9Y653	693 aa		10.05	□□□□□ -0.8
RBM28-205	ENST00000481788	TULP4	Q9NRJ4	1543 aa		10.05	□□□□□ -0.8
RBM28-205	ENST00000481788	SLC24A1	O60721	1099 aa		10.04	□□□□□ -0.8
RBM28-205	ENST00000481788	OAT	P04181	439 aa		10.04	□□□□□ -0.8
RBM28-205	ENST00000481788	PPP4C	P60510	307 aa		10.04	□□□□□ -0.8
RBM28-205	ENST00000481788	NBPF8	Q3BBV2	869 aa		10.04	□□□□□ -0.8
RBM28-205	ENST00000481788	NBPF14	Q5TI25	921 aa		10.04	□□□□□ -0.8
RBM28-205	ENST00000481788	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.04	□□□□□ -0.8
RBM28-205	ENST00000481788	PLA2G2E	Q9NZK7	142 aa		10.04	□□□□□ -0.8
RBM28-205	ENST00000481788	CASZ1	Q86V15	1759 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	RNF40	O75150	1001 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	DNAJB2	P25686	324 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	IFFO2	Q5TF58	517 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	LARP1	Q6PKG0	1096 aa	Known RBP	10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	PTF1A	Q7RTS3	328 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	SLF2	Q8IX21	1173 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	PEAK1	Q9H792	1746 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	STRN4	Q9NRL3	753 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	ATP7B	P35670	1465 aa		10.03	□□□□□ -0.8
RBM28-205	ENST00000481788	LMO7	Q8WWI1	1683 aa		10.02	□□□□□ -0.8
RBM28-205	ENST00000481788	CPD	O75976	1380 aa		10.02	□□□□□ -0.8
RBM28-205	ENST00000481788	NRK	Q7Z2Y5	1582 aa		10.02	□□□□□ -0.81
RBM28-205	ENST00000481788	WASL	O00401	505 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM28-205	ENST00000481788	PLSCR1	O15162	318 aa		10.02	□□□□□ -0.81
RBM28-205	ENST00000481788	GPR37	O15354	613 aa		10.02	□□□□□ -0.81
RBM28-205	ENST00000481788	WBP1L	Q9NX94	342 aa		10.02	□□□□□ -0.81
RBM28-205	ENST00000481788	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM28-205	ENST00000481788	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	C1QTNF8	P60827	252 aa		10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	ZC3H6	P61129	1189 aa	Known RBP	10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	PDE3B	Q13370	1112 aa		10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	TCP11L2	Q8N4U5	519 aa		10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	MPHOSPH9	Q99550	1183 aa		10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	USP35	Q9P2H5	1018 aa		10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	GOLGB1	Q14789	3259 aa	Known RBP	10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	USP19	O94966	1318 aa		10.01	□□□□□ -0.81
RBM28-205	ENST00000481788	SWT1	Q5T5J6	900 aa	Known RBP	10	□□□□□ -0.81
RBM28-205	ENST00000481788	POGK	Q9P215	609 aa		10	□□□□□ -0.81
RBM28-205	ENST00000481788	MINK1	Q8N4C8	1332 aa	Predicted RBP	10	□□□□□ -0.81
RBM28-205	ENST00000481788	POLR3A	O14802	1390 aa	Predicted RBP	10	□□□□□ -0.81
RBM28-205	ENST00000481788	EIF3A	Q14152	1382 aa	Known RBP	10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms