RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 HSPA1LP34931 641 aa19.93■□□□□ 0.78
RXRA-202ENST00000481739 PLCH1Q4KWH8 1693 aa19.93■□□□□ 0.78
RXRA-202ENST00000481739 PTPRCP08575 1304 aa19.93■□□□□ 0.78
RXRA-202ENST00000481739 RGS3P49796 1198 aa19.92■□□□□ 0.78
RXRA-202ENST00000481739 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
RXRA-202ENST00000481739 TSPYL4Q9UJ04 414 aa19.92■□□□□ 0.78
RXRA-202ENST00000481739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.92■□□□□ 0.78
RXRA-202ENST00000481739 IL2RBP14784 551 aa19.91■□□□□ 0.78
RXRA-202ENST00000481739 LGR6Q9HBX8 967 aa19.91■□□□□ 0.78
RXRA-202ENST00000481739 MIS18AQ9NYP9 233 aa19.91■□□□□ 0.78
RXRA-202ENST00000481739 PARP4Q9UKK3 1724 aaKnown RBP19.91■□□□□ 0.78
RXRA-202ENST00000481739 SKAP1Q86WV1 359 aa19.9■□□□□ 0.78
RXRA-202ENST00000481739 IPO9Q96P70 1041 aaKnown RBP19.9■□□□□ 0.78
RXRA-202ENST00000481739 OVOS2A0A0G2JMS6 1433 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 ZBTB7BO15156 539 aaPredicted RBP19.88■□□□□ 0.77
RXRA-202ENST00000481739 RNMTO43148 476 aaKnown RBP19.88■□□□□ 0.77
RXRA-202ENST00000481739 TEFQ10587 303 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 TAF7Q15545 349 aaPredicted RBP19.88■□□□□ 0.77
RXRA-202ENST00000481739 C8orf34Q49A92 452 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 SMC5Q8IY18 1101 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 IFNL2Q8IZJ0 200 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 PLEKHG2Q9H7P9 1386 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 VIRMAQ69YN4 1812 aaKnown RBP19.88■□□□□ 0.77
RXRA-202ENST00000481739 SPATA31A6Q5VVP1 1343 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 PHKG2P15735 406 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
RXRA-202ENST00000481739 NGLY1Q96IV0 654 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 C8orf37Q96NL8 207 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 CHMP4AQ9BY43 222 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 PDZRN3Q9UPQ7 1066 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 CEMIPQ8WUJ3 1361 aa19.88■□□□□ 0.77
RXRA-202ENST00000481739 MSH5O43196 834 aa19.86■□□□□ 0.77
RXRA-202ENST00000481739 INTS3Q68E01 1043 aaKnown RBP19.86■□□□□ 0.77
RXRA-202ENST00000481739 CYP27B1O15528 508 aa19.85■□□□□ 0.77
RXRA-202ENST00000481739 ERICH6Q7L0X2 663 aa19.85■□□□□ 0.77
RXRA-202ENST00000481739 CCDC9Q9Y3X0 531 aaKnown RBP19.85■□□□□ 0.77
RXRA-202ENST00000481739 NRAPQ86VF7 1730 aa19.84■□□□□ 0.77
RXRA-202ENST00000481739 MEX3CQ5U5Q3 659 aaKnown RBP19.84■□□□□ 0.77
RXRA-202ENST00000481739 NWD2Q9ULI1 1742 aa19.84■□□□□ 0.77
RXRA-202ENST00000481739 PCDH11XQ9BZA7 1347 aa19.84■□□□□ 0.77
RXRA-202ENST00000481739 PCDH11YQ9BZA8 1340 aa19.84■□□□□ 0.77
RXRA-202ENST00000481739 RGS12O14924 1447 aa19.83■□□□□ 0.77
RXRA-202ENST00000481739 DDX54Q8TDD1 881 aaKnown RBP19.83■□□□□ 0.77
RXRA-202ENST00000481739 GCC1Q96CN9 775 aa19.83■□□□□ 0.77
RXRA-202ENST00000481739 SLIT2O94813 1529 aa19.83■□□□□ 0.77
RXRA-202ENST00000481739 HSP90AB1P08238 724 aaKnown RBP19.83■□□□□ 0.76
RXRA-202ENST00000481739 KRT24Q2M2I5 525 aa19.83■□□□□ 0.76
RXRA-202ENST00000481739 CCDC30Q5VVM6 783 aa19.83■□□□□ 0.76
RXRA-202ENST00000481739 DDRGK1Q96HY6 314 aa19.83■□□□□ 0.76
RXRA-202ENST00000481739 STK31Q9BXU1 1019 aa19.83■□□□□ 0.76
RXRA-202ENST00000481739 BTBD11A6QL63 1104 aa19.81■□□□□ 0.76
RXRA-202ENST00000481739 HOXB7P09629 217 aa19.81■□□□□ 0.76
RXRA-202ENST00000481739 DCAF5Q96JK2 942 aa19.81■□□□□ 0.76
RXRA-202ENST00000481739 NOP58Q9Y2X3 529 aaKnown RBP19.81■□□□□ 0.76
RXRA-202ENST00000481739 LRP6O75581 1613 aa19.81■□□□□ 0.76
RXRA-202ENST00000481739 SCN11AQ9UI33 1791 aa19.81■□□□□ 0.76
RXRA-202ENST00000481739 UNC5CLQ8IV45 518 aa19.81■□□□□ 0.76
RXRA-202ENST00000481739 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
RXRA-202ENST00000481739 SPATA31A1Q5TZJ5 1347 aa19.8■□□□□ 0.76
RXRA-202ENST00000481739 KDM6AO15550 1401 aaPredicted RBP19.8■□□□□ 0.76
RXRA-202ENST00000481739 ANP32EQ9BTT0 268 aa19.79■□□□□ 0.76
RXRA-202ENST00000481739 ZBTB47Q9UFB7 747 aaPredicted RBP19.79■□□□□ 0.76
RXRA-202ENST00000481739 ADAMTS7Q9UKP4 1686 aa19.78■□□□□ 0.76
RXRA-202ENST00000481739 CACNA1FO60840 1977 aa19.78■□□□□ 0.76
RXRA-202ENST00000481739 CCT4P50991 539 aaKnown RBP19.78■□□□□ 0.76
RXRA-202ENST00000481739 NUCB1Q02818 461 aa19.78■□□□□ 0.76
RXRA-202ENST00000481739 SLC52A2Q9HAB3 445 aa19.78■□□□□ 0.76
RXRA-202ENST00000481739 THRAP3Q9Y2W1 955 aaKnown RBP19.78■□□□□ 0.76
RXRA-202ENST00000481739 SPATA31A5Q5VU36 1347 aa19.78■□□□□ 0.76
RXRA-202ENST00000481739 SPATA31A7Q8IWB4 1347 aa19.78■□□□□ 0.76
RXRA-202ENST00000481739 DISP2A7MBM2 1401 aa19.77■□□□□ 0.76
RXRA-202ENST00000481739 SHANK3Q9BYB0 1731 aa19.77■□□□□ 0.75
RXRA-202ENST00000481739 EXOC5O00471 708 aa19.76■□□□□ 0.75
RXRA-202ENST00000481739 CABP4P57796 275 aa19.76■□□□□ 0.75
RXRA-202ENST00000481739 NPM2Q86SE8 214 aaKnown RBP19.76■□□□□ 0.75
RXRA-202ENST00000481739 NFATC2IPQ8NCF5 419 aa19.76■□□□□ 0.75
RXRA-202ENST00000481739 WNK3Q9BYP7 1800 aa19.76■□□□□ 0.75
RXRA-202ENST00000481739 RPAP2Q8IXW5 612 aaPredicted RBP19.76■□□□□ 0.75
RXRA-202ENST00000481739 FNBP4Q8N3X1 1017 aaPredicted RBP19.76■□□□□ 0.75
RXRA-202ENST00000481739 CDCA7Q9BWT1 371 aaPredicted RBP19.76■□□□□ 0.75
RXRA-202ENST00000481739 USP21Q9UK80 565 aa19.76■□□□□ 0.75
RXRA-202ENST00000481739 SIPA1L3O60292 1781 aaPredicted RBP19.76■□□□□ 0.75
RXRA-202ENST00000481739 KDM3BQ7LBC6 1761 aa19.76■□□□□ 0.75
RXRA-202ENST00000481739 KCNQ3O43525 872 aa19.75■□□□□ 0.75
RXRA-202ENST00000481739 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
RXRA-202ENST00000481739 BCL9LQ86UU0 1499 aa19.75■□□□□ 0.75
RXRA-202ENST00000481739 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
RXRA-202ENST00000481739 VPS72Q15906 364 aa19.74■□□□□ 0.75
RXRA-202ENST00000481739 CHD1LQ86WJ1 897 aa19.74■□□□□ 0.75
RXRA-202ENST00000481739 NKX1-1Q15270 411 aaPredicted RBP19.73■□□□□ 0.75
RXRA-202ENST00000481739 FLIIQ13045 1269 aa19.72■□□□□ 0.75
RXRA-202ENST00000481739 UPF2Q9HAU5 1272 aaKnown RBP19.72■□□□□ 0.75
RXRA-202ENST00000481739 SLC39A6Q13433 755 aa19.72■□□□□ 0.75
RXRA-202ENST00000481739 DDB1Q16531 1140 aa19.72■□□□□ 0.75
RXRA-202ENST00000481739 ERVV-2B6SEH9 535 aa19.71■□□□□ 0.75
RXRA-202ENST00000481739 BARGINQ6ZT62 677 aa19.71■□□□□ 0.75
RXRA-202ENST00000481739 ANKRD44Q8N8A2 993 aa19.71■□□□□ 0.75
RXRA-202ENST00000481739 NECTIN2Q92692 538 aa19.71■□□□□ 0.75
RXRA-202ENST00000481739 AFF2P51816 1311 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms