RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
CLIP4-210ENST00000481628 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
CLIP4-210ENST00000481628 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
CLIP4-210ENST00000481628 DCAF5Q96JK2 942 aa12.54□□□□□ -0.4
CLIP4-210ENST00000481628 PANK3Q9H999 370 aa12.54□□□□□ -0.4
CLIP4-210ENST00000481628 GNPATO15228 680 aa12.53□□□□□ -0.4
CLIP4-210ENST00000481628 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
CLIP4-210ENST00000481628 PHF14O94880 888 aa12.53□□□□□ -0.4
CLIP4-210ENST00000481628 SLC4A9Q96Q91 983 aa12.53□□□□□ -0.4
CLIP4-210ENST00000481628 CNTNAP4Q9C0A0 1308 aa12.53□□□□□ -0.4
CLIP4-210ENST00000481628 ATP10DQ9P241 1426 aa12.53□□□□□ -0.4
CLIP4-210ENST00000481628 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
CLIP4-210ENST00000481628 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
CLIP4-210ENST00000481628 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
CLIP4-210ENST00000481628 RC3H1Q5TC82 1133 aaKnown RBP12.52□□□□□ -0.41
CLIP4-210ENST00000481628 SMIM5Q71RC9 77 aa12.52□□□□□ -0.41
CLIP4-210ENST00000481628 C10orf71Q711Q0 1435 aa12.52□□□□□ -0.41
CLIP4-210ENST00000481628 PXDNLA1KZ92 1463 aa12.52□□□□□ -0.41
CLIP4-210ENST00000481628 ADRA2BP18089 450 aa12.51□□□□□ -0.41
CLIP4-210ENST00000481628 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
CLIP4-210ENST00000481628 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
CLIP4-210ENST00000481628 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
CLIP4-210ENST00000481628 SENP3-EIF4A1A0A087X0R7 540 aa12.5□□□□□ -0.41
CLIP4-210ENST00000481628 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
CLIP4-210ENST00000481628 MRC1P22897 1456 aa12.5□□□□□ -0.41
CLIP4-210ENST00000481628 TJP1Q07157 1748 aa12.49□□□□□ -0.41
CLIP4-210ENST00000481628 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
CLIP4-210ENST00000481628 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
CLIP4-210ENST00000481628 SCN11AQ9UI33 1791 aa12.48□□□□□ -0.41
CLIP4-210ENST00000481628 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
CLIP4-210ENST00000481628 RPS6KA4O75676 772 aa12.48□□□□□ -0.41
CLIP4-210ENST00000481628 MMP10P09238 476 aa12.48□□□□□ -0.41
CLIP4-210ENST00000481628 IL13P35225 146 aa12.48□□□□□ -0.41
CLIP4-210ENST00000481628 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-210ENST00000481628 MORC1Q86VD1 984 aa12.48□□□□□ -0.41
CLIP4-210ENST00000481628 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
CLIP4-210ENST00000481628 MYH14Q7Z406 1995 aaKnown RBP12.48□□□□□ -0.41
CLIP4-210ENST00000481628 BRCA1P38398 1863 aaKnown RBP12.47□□□□□ -0.41
CLIP4-210ENST00000481628 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
CLIP4-210ENST00000481628 NLGN1Q8N2Q7 840 aa12.47□□□□□ -0.41
CLIP4-210ENST00000481628 GYS1P13807 737 aa12.46□□□□□ -0.41
CLIP4-210ENST00000481628 CABP4P57796 275 aa12.46□□□□□ -0.41
CLIP4-210ENST00000481628 TGFB2P61812 414 aa12.46□□□□□ -0.41
CLIP4-210ENST00000481628 C1orf141Q5JVX7 400 aa12.46□□□□□ -0.41
CLIP4-210ENST00000481628 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
CLIP4-210ENST00000481628 KNSTRNQ9Y448 316 aa12.46□□□□□ -0.41
CLIP4-210ENST00000481628 MTHFSP49914 203 aa12.45□□□□□ -0.42
CLIP4-210ENST00000481628 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
CLIP4-210ENST00000481628 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
CLIP4-210ENST00000481628 KIF7Q2M1P5 1343 aa12.44□□□□□ -0.42
CLIP4-210ENST00000481628 N4BP2Q86UW6 1770 aaPredicted RBP12.44□□□□□ -0.42
CLIP4-210ENST00000481628 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
CLIP4-210ENST00000481628 USP42Q9H9J4 1324 aaKnown RBP12.43□□□□□ -0.42
CLIP4-210ENST00000481628 KCPQ6ZWJ8 1503 aa12.43□□□□□ -0.42
CLIP4-210ENST00000481628 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
CLIP4-210ENST00000481628 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
CLIP4-210ENST00000481628 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
CLIP4-210ENST00000481628 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
CLIP4-210ENST00000481628 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
CLIP4-210ENST00000481628 ARFGEF1Q9Y6D6 1849 aa12.42□□□□□ -0.42
CLIP4-210ENST00000481628 COL3A1P02461 1466 aaPredicted RBP12.42□□□□□ -0.42
CLIP4-210ENST00000481628 PER1O15534 1290 aaPredicted RBP12.42□□□□□ -0.42
CLIP4-210ENST00000481628 RFC4P35249 363 aa12.42□□□□□ -0.42
CLIP4-210ENST00000481628 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
CLIP4-210ENST00000481628 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
CLIP4-210ENST00000481628 PTCD1O75127 700 aaKnown RBP12.41□□□□□ -0.42
CLIP4-210ENST00000481628 SLC52A2Q9HAB3 445 aa12.41□□□□□ -0.42
CLIP4-210ENST00000481628 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
CLIP4-210ENST00000481628 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.42
CLIP4-210ENST00000481628 KIF3CO14782 793 aa12.4□□□□□ -0.42
CLIP4-210ENST00000481628 KCNA3P22001 575 aa12.4□□□□□ -0.42
CLIP4-210ENST00000481628 INTS5Q6P9B9 1019 aaKnown RBP12.4□□□□□ -0.42
CLIP4-210ENST00000481628 WWC3Q9ULE0 1092 aa12.4□□□□□ -0.42
CLIP4-210ENST00000481628 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
CLIP4-210ENST00000481628 SOS1Q07889 1333 aaPredicted RBP12.39□□□□□ -0.43
CLIP4-210ENST00000481628 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
CLIP4-210ENST00000481628 A0A0G2JLW4 131 aa12.39□□□□□ -0.43
CLIP4-210ENST00000481628 RNMTO43148 476 aaKnown RBP12.39□□□□□ -0.43
CLIP4-210ENST00000481628 DPEP1P16444 411 aa12.39□□□□□ -0.43
CLIP4-210ENST00000481628 DDR1Q08345 913 aa12.39□□□□□ -0.43
CLIP4-210ENST00000481628 HSPA6P17066 643 aa12.38□□□□□ -0.43
CLIP4-210ENST00000481628 FKBP8Q14318 412 aa12.38□□□□□ -0.43
CLIP4-210ENST00000481628 LGR6Q9HBX8 967 aa12.38□□□□□ -0.43
CLIP4-210ENST00000481628 SRP68Q9UHB9 627 aaKnown RBP12.38□□□□□ -0.43
CLIP4-210ENST00000481628 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
CLIP4-210ENST00000481628 POLRMTO00411 1230 aaKnown RBP12.37□□□□□ -0.43
CLIP4-210ENST00000481628 CYP19A1P11511 503 aaPredicted RBP12.37□□□□□ -0.43
CLIP4-210ENST00000481628 TM4SF1P30408 202 aa12.37□□□□□ -0.43
CLIP4-210ENST00000481628 DNAJC10Q8IXB1 793 aa12.37□□□□□ -0.43
CLIP4-210ENST00000481628 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
CLIP4-210ENST00000481628 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
CLIP4-210ENST00000481628 COL15A1P39059 1388 aa12.36□□□□□ -0.43
CLIP4-210ENST00000481628 DIAPH1O60610 1272 aaKnown RBP12.36□□□□□ -0.43
CLIP4-210ENST00000481628 HMOX1P09601 288 aa12.36□□□□□ -0.43
CLIP4-210ENST00000481628 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
CLIP4-210ENST00000481628 SIPA1L3O60292 1781 aaPredicted RBP12.35□□□□□ -0.43
CLIP4-210ENST00000481628 DLEC1Q9Y238 1755 aa12.35□□□□□ -0.43
CLIP4-210ENST00000481628 FCHSD2O94868 740 aa12.35□□□□□ -0.43
CLIP4-210ENST00000481628 PIM2Q9P1W9 311 aa12.35□□□□□ -0.43
CLIP4-210ENST00000481628 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms