RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 ATP6V1AP38606 617 aa31.89■■■□□ 2.7
TTC3-217ENST00000481605 AMIGO3Q86WK7 504 aa31.89■■■□□ 2.7
TTC3-217ENST00000481605 ITPK1Q13572 414 aa31.88■■■□□ 2.69
TTC3-217ENST00000481605 KDM6AO15550 1401 aaPredicted RBP31.87■■■□□ 2.69
TTC3-217ENST00000481605 PHF14O94880 888 aa31.87■■■□□ 2.69
TTC3-217ENST00000481605 C1orf141Q5JVX7 400 aa31.87■■■□□ 2.69
TTC3-217ENST00000481605 SMIM5Q71RC9 77 aa31.85■■■□□ 2.69
TTC3-217ENST00000481605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.85■■■□□ 2.69
TTC3-217ENST00000481605 CABP4P57796 275 aa31.85■■■□□ 2.69
TTC3-217ENST00000481605 UBR3Q6ZT12 1888 aa31.84■■■□□ 2.69
TTC3-217ENST00000481605 SSFA2P28290 1259 aa31.82■■■□□ 2.68
TTC3-217ENST00000481605 CNGB1Q14028 1251 aaPredicted RBP31.82■■■□□ 2.68
TTC3-217ENST00000481605 NLGN2Q8NFZ4 835 aa31.82■■■□□ 2.68
TTC3-217ENST00000481605 GPR162Q16538 588 aa31.81■■■□□ 2.68
TTC3-217ENST00000481605 RBM42Q9BTD8 480 aaKnown RBP31.81■■■□□ 2.68
TTC3-217ENST00000481605 NPC1L1Q9UHC9 1359 aa31.81■■■□□ 2.68
TTC3-217ENST00000481605 GOLGB1Q14789 3259 aaKnown RBP31.81■■■□□ 2.68
TTC3-217ENST00000481605 GNPATO15228 680 aa31.8■■■□□ 2.68
TTC3-217ENST00000481605 HMOX1P09601 288 aa31.8■■■□□ 2.68
TTC3-217ENST00000481605 SLC4A9Q96Q91 983 aa31.8■■■□□ 2.68
TTC3-217ENST00000481605 DIAPH1O60610 1272 aaKnown RBP31.79■■■□□ 2.68
TTC3-217ENST00000481605 NFATC2IPQ8NCF5 419 aa31.77■■■□□ 2.68
TTC3-217ENST00000481605 PELP1Q8IZL8 1130 aaKnown RBP31.76■■■□□ 2.68
TTC3-217ENST00000481605 AKAP4Q5JQC9 854 aa31.75■■■□□ 2.67
TTC3-217ENST00000481605 ZNF831Q5JPB2 1677 aa31.74■■■□□ 2.67
TTC3-217ENST00000481605 PTCD1O75127 700 aaKnown RBP31.72■■■□□ 2.67
TTC3-217ENST00000481605 RTCBQ9Y3I0 505 aaKnown RBP31.71■■■□□ 2.67
TTC3-217ENST00000481605 CD2APQ9Y5K6 639 aa31.71■■■□□ 2.67
TTC3-217ENST00000481605 SCN11AQ9UI33 1791 aa31.7■■■□□ 2.67
TTC3-217ENST00000481605 RC3H1Q5TC82 1133 aaKnown RBP31.7■■■□□ 2.66
TTC3-217ENST00000481605 COL3A1P02461 1466 aaPredicted RBP31.68■■■□□ 2.66
TTC3-217ENST00000481605 CHD4Q14839 1912 aa31.68■■■□□ 2.66
TTC3-217ENST00000481605 TRAPPC3LQ5T215 181 aa31.68■■■□□ 2.66
TTC3-217ENST00000481605 LGR6Q9HBX8 967 aa31.68■■■□□ 2.66
TTC3-217ENST00000481605 COL5A3P25940 1745 aaPredicted RBP31.68■■■□□ 2.66
TTC3-217ENST00000481605 CNTNAP4Q9C0A0 1308 aa31.67■■■□□ 2.66
TTC3-217ENST00000481605 MTHFSDQ2M296 383 aaKnown RBP31.67■■■□□ 2.66
TTC3-217ENST00000481605 SLC52A2Q9HAB3 445 aa31.66■■■□□ 2.66
TTC3-217ENST00000481605 U2SURPO15042 1029 aaKnown RBP31.65■■■□□ 2.66
TTC3-217ENST00000481605 RNMTO43148 476 aaKnown RBP31.65■■■□□ 2.66
TTC3-217ENST00000481605 YBX3P16989 372 aaKnown RBP eCLIP31.65■■■□□ 2.664e-14■□□□□ 9.1
TTC3-217ENST00000481605 ZNF784Q8NCA9 323 aaPredicted RBP31.64■■■□□ 2.66
TTC3-217ENST00000481605 RPS6KA4O75676 772 aa31.63■■■□□ 2.65
TTC3-217ENST00000481605 ADRA2BP18089 450 aa31.63■■■□□ 2.65
TTC3-217ENST00000481605 ARHGEF1Q92888 912 aaKnown RBP31.63■■■□□ 2.65
TTC3-217ENST00000481605 MRC1P22897 1456 aa31.6■■■□□ 2.65
TTC3-217ENST00000481605 CRKLP46109 303 aaKnown RBP31.6■■■□□ 2.65
TTC3-217ENST00000481605 GRIN3BO60391 1043 aa31.59■■■□□ 2.65
TTC3-217ENST00000481605 MMP10P09238 476 aa31.59■■■□□ 2.65
TTC3-217ENST00000481605 RFC4P35249 363 aa31.59■■■□□ 2.65
TTC3-217ENST00000481605 MYH14Q7Z406 1995 aaKnown RBP31.59■■■□□ 2.65
TTC3-217ENST00000481605 NLGN1Q8N2Q7 840 aa31.58■■■□□ 2.65
TTC3-217ENST00000481605 TJP1Q07157 1748 aa31.57■■■□□ 2.64
TTC3-217ENST00000481605 SLC39A6Q13433 755 aa31.57■■■□□ 2.64
TTC3-217ENST00000481605 CFAP53Q96M91 514 aa31.57■■■□□ 2.64
TTC3-217ENST00000481605 VIRMAQ69YN4 1812 aaKnown RBP31.56■■■□□ 2.64
TTC3-217ENST00000481605 CICQ96RK0 1608 aaPredicted RBP31.55■■■□□ 2.64
TTC3-217ENST00000481605 ADAMTS7Q9UKP4 1686 aa31.55■■■□□ 2.64
TTC3-217ENST00000481605 GYS1P13807 737 aa31.54■■■□□ 2.64
TTC3-217ENST00000481605 DNAJC10Q8IXB1 793 aa31.54■■■□□ 2.64
TTC3-217ENST00000481605 GAS2L2Q8NHY3 880 aa31.53■■■□□ 2.64
TTC3-217ENST00000481605 INTS5Q6P9B9 1019 aaKnown RBP31.52■■■□□ 2.64
TTC3-217ENST00000481605 C4AP0C0L4 1744 aa31.52■■■□□ 2.64
TTC3-217ENST00000481605 PPP2R1AP30153 589 aa31.51■■■□□ 2.63
TTC3-217ENST00000481605 WWC3Q9ULE0 1092 aa31.5■■■□□ 2.63
TTC3-217ENST00000481605 KCPQ6ZWJ8 1503 aa31.5■■■□□ 2.63
TTC3-217ENST00000481605 GNAT3A8MTJ3 354 aa31.49■■■□□ 2.63
TTC3-217ENST00000481605 CCDC87Q9NVE4 849 aa31.49■■■□□ 2.63
TTC3-217ENST00000481605 SRP68Q9UHB9 627 aaKnown RBP31.49■■■□□ 2.63
TTC3-217ENST00000481605 NUDCQ9Y266 331 aa31.49■■■□□ 2.63
TTC3-217ENST00000481605 CYP19A1P11511 503 aaPredicted RBP31.47■■■□□ 2.63
TTC3-217ENST00000481605 PRKAR2BP31323 418 aa31.47■■■□□ 2.63
TTC3-217ENST00000481605 IL17REQ8NFR9 667 aa31.47■■■□□ 2.63
TTC3-217ENST00000481605 RSPH6AQ9H0K4 717 aa31.47■■■□□ 2.63
TTC3-217ENST00000481605 USP42Q9H9J4 1324 aaKnown RBP31.46■■■□□ 2.63
TTC3-217ENST00000481605 PHACTR3Q96KR7 559 aa31.46■■■□□ 2.63
TTC3-217ENST00000481605 PARP3Q9Y6F1 533 aa31.46■■■□□ 2.63
TTC3-217ENST00000481605 TEFQ10587 303 aa31.45■■■□□ 2.63
TTC3-217ENST00000481605 TTC5Q8N0Z6 440 aa31.44■■■□□ 2.62
TTC3-217ENST00000481605 VSIG10Q8N0Z9 540 aa31.44■■■□□ 2.62
TTC3-217ENST00000481605 C10orf71Q711Q0 1435 aa31.43■■■□□ 2.62
TTC3-217ENST00000481605 U2AF1L5P0DN76 240 aaPredicted RBP31.43■■■□□ 2.62
TTC3-217ENST00000481605 U2AF1Q01081 240 aaKnown RBP eCLIP31.43■■■□□ 2.62
TTC3-217ENST00000481605 FKBP8Q14318 412 aa31.43■■■□□ 2.62
TTC3-217ENST00000481605 KIF13BQ9NQT8 1826 aa31.42■■■□□ 2.62
TTC3-217ENST00000481605 SOS1Q07889 1333 aaPredicted RBP31.42■■■□□ 2.62
TTC3-217ENST00000481605 PXDNLA1KZ92 1463 aa31.42■■■□□ 2.62
TTC3-217ENST00000481605 TGFB2P61812 414 aa31.42■■■□□ 2.62
TTC3-217ENST00000481605 UBR2Q8IWV8 1755 aa31.41■■■□□ 2.62
TTC3-217ENST00000481605 ZBTB1Q9Y2K1 713 aa31.4■■■□□ 2.62
TTC3-217ENST00000481605 ZPR1O75312 459 aa31.39■■■□□ 2.62
TTC3-217ENST00000481605 ZNF790Q6PG37 636 aa31.39■■■□□ 2.62
TTC3-217ENST00000481605 CEMIPQ8WUJ3 1361 aa31.38■■■□□ 2.61
TTC3-217ENST00000481605 A0A0G2JLW4 131 aa31.38■■■□□ 2.61
TTC3-217ENST00000481605 ZNF496Q96IT1 587 aaPredicted RBP31.38■■■□□ 2.61
TTC3-217ENST00000481605 KIAA1551Q9HCM1 1747 aa31.37■■■□□ 2.61
TTC3-217ENST00000481605 FCHSD2O94868 740 aa31.37■■■□□ 2.61
TTC3-217ENST00000481605 USPL1Q5W0Q7 1092 aa31.37■■■□□ 2.61
TTC3-217ENST00000481605 COL15A1P39059 1388 aa31.37■■■□□ 2.61
TTC3-217ENST00000481605 N4BP2Q86UW6 1770 aaPredicted RBP31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms