RNA–Protein interactions for RNA: ENST00000481559.6

GRIA1-205, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIA1, Length 2,069 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-205ENST00000481559 TNS2Q63HR2 1409 aa13.46□□□□□ -0.25
GRIA1-205ENST00000481559 CHL1O00533 1208 aa13.46□□□□□ -0.25
GRIA1-205ENST00000481559 BCAR3O75815 825 aa13.46□□□□□ -0.25
GRIA1-205ENST00000481559 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.25
GRIA1-205ENST00000481559 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
GRIA1-205ENST00000481559 TSPYL4Q9UJ04 414 aa13.46□□□□□ -0.25
GRIA1-205ENST00000481559 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.25
GRIA1-205ENST00000481559 SIPA1L3O60292 1781 aaPredicted RBP13.46□□□□□ -0.26
GRIA1-205ENST00000481559 KCNQ2O43526 872 aa13.46□□□□□ -0.26
GRIA1-205ENST00000481559 NECTIN2Q92692 538 aa13.46□□□□□ -0.26
GRIA1-205ENST00000481559 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.26
GRIA1-205ENST00000481559 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
GRIA1-205ENST00000481559 SEPT12Q8IYM1 358 aa13.45□□□□□ -0.26
GRIA1-205ENST00000481559 BTBD11A6QL63 1104 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 TEFQ10587 303 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
GRIA1-205ENST00000481559 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
GRIA1-205ENST00000481559 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 TNNQ9UQP3 1299 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 BRWD3Q6RI45 1802 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 IL16Q14005 1332 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
GRIA1-205ENST00000481559 GNAI1P63096 354 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
GRIA1-205ENST00000481559 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
GRIA1-205ENST00000481559 MYH16Q9H6N6 1097 aa13.43□□□□□ -0.26
GRIA1-205ENST00000481559 ITGB4P16144 1822 aa13.43□□□□□ -0.26
GRIA1-205ENST00000481559 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
GRIA1-205ENST00000481559 CABP4P57796 275 aa13.43□□□□□ -0.26
GRIA1-205ENST00000481559 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
GRIA1-205ENST00000481559 RCAN3Q9UKA8 241 aa13.43□□□□□ -0.26
GRIA1-205ENST00000481559 KDM3BQ7LBC6 1761 aa13.42□□□□□ -0.26
GRIA1-205ENST00000481559 PIGBQ92521 554 aa13.42□□□□□ -0.26
GRIA1-205ENST00000481559 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
GRIA1-205ENST00000481559 VAMP4O75379 141 aa13.41□□□□□ -0.26
GRIA1-205ENST00000481559 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
GRIA1-205ENST00000481559 C20orf194Q5TEA3 1177 aa13.41□□□□□ -0.26
GRIA1-205ENST00000481559 MRC1P22897 1456 aa13.41□□□□□ -0.26
GRIA1-205ENST00000481559 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
GRIA1-205ENST00000481559 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
GRIA1-205ENST00000481559 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.27
GRIA1-205ENST00000481559 PTCD1O75127 700 aaKnown RBP13.4□□□□□ -0.27
GRIA1-205ENST00000481559 ANXA1P04083 346 aa13.4□□□□□ -0.27
GRIA1-205ENST00000481559 KCNQ4P56696 695 aa13.4□□□□□ -0.27
GRIA1-205ENST00000481559 SSH1Q8WYL5 1049 aa13.4□□□□□ -0.27
GRIA1-205ENST00000481559 ZNF496Q96IT1 587 aaPredicted RBP13.4□□□□□ -0.27
GRIA1-205ENST00000481559 RARSP54136 660 aaKnown RBP13.39□□□□□ -0.27
GRIA1-205ENST00000481559 ZNF772Q68DY9 489 aaPredicted RBP13.39□□□□□ -0.27
GRIA1-205ENST00000481559 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
GRIA1-205ENST00000481559 C5P01031 1676 aa13.39□□□□□ -0.27
GRIA1-205ENST00000481559 CALD1Q05682 793 aaKnown RBP13.38□□□□□ -0.27
GRIA1-205ENST00000481559 CDCA7Q9BWT1 371 aaPredicted RBP13.38□□□□□ -0.27
GRIA1-205ENST00000481559 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
GRIA1-205ENST00000481559 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
GRIA1-205ENST00000481559 RGS12O14924 1447 aa13.38□□□□□ -0.27
GRIA1-205ENST00000481559 HSP90AB1P08238 724 aaKnown RBP13.37□□□□□ -0.27
GRIA1-205ENST00000481559 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
GRIA1-205ENST00000481559 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
GRIA1-205ENST00000481559 ATG3Q9NT62 314 aa13.37□□□□□ -0.27
GRIA1-205ENST00000481559 ERVV-2B6SEH9 535 aa13.36□□□□□ -0.27
GRIA1-205ENST00000481559 FRAT1Q92837 279 aaPredicted RBP13.36□□□□□ -0.27
GRIA1-205ENST00000481559 BCL9O00512 1426 aa13.36□□□□□ -0.27
GRIA1-205ENST00000481559 RXRBP28702 533 aa13.36□□□□□ -0.27
GRIA1-205ENST00000481559 G2E3Q7L622 706 aa13.36□□□□□ -0.27
GRIA1-205ENST00000481559 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
GRIA1-205ENST00000481559 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
GRIA1-205ENST00000481559 PROSER3Q2NL68 480 aa13.35□□□□□ -0.27
GRIA1-205ENST00000481559 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
GRIA1-205ENST00000481559 PLEKHG2Q9H7P9 1386 aa13.35□□□□□ -0.27
GRIA1-205ENST00000481559 GIGYF1O75420 1035 aaPredicted RBP13.35□□□□□ -0.27
GRIA1-205ENST00000481559 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
GRIA1-205ENST00000481559 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
GRIA1-205ENST00000481559 CLUAP1Q96AJ1 413 aa13.34□□□□□ -0.27
GRIA1-205ENST00000481559 ZNF428Q96B54 188 aa13.34□□□□□ -0.27
GRIA1-205ENST00000481559 KRT27Q7Z3Y8 459 aa13.33□□□□□ -0.27
GRIA1-205ENST00000481559 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.27
GRIA1-205ENST00000481559 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.28
GRIA1-205ENST00000481559 UBR2Q8IWV8 1755 aa13.33□□□□□ -0.28
GRIA1-205ENST00000481559 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
GRIA1-205ENST00000481559 RLBP1P12271 317 aa13.33□□□□□ -0.28
GRIA1-205ENST00000481559 FKBP8Q14318 412 aa13.33□□□□□ -0.28
GRIA1-205ENST00000481559 SMIM5Q71RC9 77 aa13.33□□□□□ -0.28
GRIA1-205ENST00000481559 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
GRIA1-205ENST00000481559 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
GRIA1-205ENST00000481559 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
GRIA1-205ENST00000481559 PHAXQ9H814 394 aaKnown RBP13.32□□□□□ -0.28
GRIA1-205ENST00000481559 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
GRIA1-205ENST00000481559 RNF123Q5XPI4 1314 aa13.32□□□□□ -0.28
GRIA1-205ENST00000481559 TRIM37O94972 964 aa13.32□□□□□ -0.28
GRIA1-205ENST00000481559 PANK1Q8TE04 598 aa13.32□□□□□ -0.28
GRIA1-205ENST00000481559 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
GRIA1-205ENST00000481559 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
GRIA1-205ENST00000481559 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
GRIA1-205ENST00000481559 BTAF1O14981 1849 aa13.31□□□□□ -0.28
GRIA1-205ENST00000481559 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
GRIA1-205ENST00000481559 A1BGP04217 495 aa13.3□□□□□ -0.28
GRIA1-205ENST00000481559 MYL6BP14649 208 aa13.3□□□□□ -0.28
GRIA1-205ENST00000481559 F6X3S4 739 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms