RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 ADAMTS7Q9UKP4 1686 aa23.13■■□□□ 1.29
MRPL28-209ENST00000481453 SLAIN2Q9P270 581 aa23.12■■□□□ 1.29
MRPL28-209ENST00000481453 CPDO75976 1380 aa23.11■■□□□ 1.29
MRPL28-209ENST00000481453 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
MRPL28-209ENST00000481453 RNMTO43148 476 aaKnown RBP23.1■■□□□ 1.29
MRPL28-209ENST00000481453 CCDC30Q5VVM6 783 aa23.1■■□□□ 1.29
MRPL28-209ENST00000481453 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
MRPL28-209ENST00000481453 SIPA1L3O60292 1781 aaPredicted RBP23.1■■□□□ 1.29
MRPL28-209ENST00000481453 CACNA1FO60840 1977 aa23.09■■□□□ 1.29
MRPL28-209ENST00000481453 NUCB1Q02818 461 aa23.09■■□□□ 1.29
MRPL28-209ENST00000481453 CHRNA2Q15822 529 aa23.09■■□□□ 1.29
MRPL28-209ENST00000481453 STK31Q9BXU1 1019 aa23.09■■□□□ 1.29
MRPL28-209ENST00000481453 ATP10DQ9P241 1426 aa23.08■■□□□ 1.29
MRPL28-209ENST00000481453 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
MRPL28-209ENST00000481453 C1orf141Q5JVX7 400 aa23.08■■□□□ 1.29
MRPL28-209ENST00000481453 UPF2Q9HAU5 1272 aaKnown RBP23.08■■□□□ 1.29
MRPL28-209ENST00000481453 BECN1Q14457 450 aa23.08■■□□□ 1.28
MRPL28-209ENST00000481453 GSE1Q14687 1217 aa23.08■■□□□ 1.28
MRPL28-209ENST00000481453 MEGF6O75095 1541 aa23.07■■□□□ 1.28
MRPL28-209ENST00000481453 KCNQ3O43525 872 aa23.07■■□□□ 1.28
MRPL28-209ENST00000481453 NECTIN2Q92692 538 aa23.07■■□□□ 1.28
MRPL28-209ENST00000481453 NLRP2Q9NX02 1062 aa23.07■■□□□ 1.28
MRPL28-209ENST00000481453 F6X3S4 739 aa23.06■■□□□ 1.28
MRPL28-209ENST00000481453 TEFQ10587 303 aa23.06■■□□□ 1.28
MRPL28-209ENST00000481453 FLIIQ13045 1269 aa23.05■■□□□ 1.28
MRPL28-209ENST00000481453 N4BP2Q86UW6 1770 aaPredicted RBP23.05■■□□□ 1.28
MRPL28-209ENST00000481453 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
MRPL28-209ENST00000481453 GCC1Q96CN9 775 aa23.05■■□□□ 1.28
MRPL28-209ENST00000481453 FRAT2O75474 233 aaPredicted RBP23.04■■□□□ 1.28
MRPL28-209ENST00000481453 MEIS3Q99687 375 aa23.04■■□□□ 1.28
MRPL28-209ENST00000481453 BTBD11A6QL63 1104 aa23.04■■□□□ 1.28
MRPL28-209ENST00000481453 NHSL1Q5SYE7 1610 aa23.03■■□□□ 1.28
MRPL28-209ENST00000481453 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
MRPL28-209ENST00000481453 CHD1LQ86WJ1 897 aa23.03■■□□□ 1.28
MRPL28-209ENST00000481453 RAPGEF4Q8WZA2 1011 aa23.03■■□□□ 1.28
MRPL28-209ENST00000481453 HOXB7P09629 217 aa23.02■■□□□ 1.28
MRPL28-209ENST00000481453 CCT4P50991 539 aaKnown RBP23.02■■□□□ 1.28
MRPL28-209ENST00000481453 SCN11AQ9UI33 1791 aa23.02■■□□□ 1.28
MRPL28-209ENST00000481453 PKD1L3Q7Z443 1732 aa23.02■■□□□ 1.27
MRPL28-209ENST00000481453 ANKRD44Q8N8A2 993 aa23.01■■□□□ 1.27
MRPL28-209ENST00000481453 TBC1D32Q96NH3 1257 aa23.01■■□□□ 1.27
MRPL28-209ENST00000481453 LNPKQ9C0E8 428 aa23.01■■□□□ 1.27
MRPL28-209ENST00000481453 KDM6AO15550 1401 aaPredicted RBP23.01■■□□□ 1.27
MRPL28-209ENST00000481453 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
MRPL28-209ENST00000481453 CSB-PGBD3P0DP91 1061 aa23.01■■□□□ 1.27
MRPL28-209ENST00000481453 SLC4A10Q6U841 1118 aa23.01■■□□□ 1.27
MRPL28-209ENST00000481453 HEG1Q9ULI3 1381 aa23■■□□□ 1.27
MRPL28-209ENST00000481453 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
MRPL28-209ENST00000481453 CEP85Q6P2H3 762 aa23■■□□□ 1.27
MRPL28-209ENST00000481453 FKBP5Q13451 457 aaPredicted RBP23■■□□□ 1.27
MRPL28-209ENST00000481453 PXDNLA1KZ92 1463 aa22.99■■□□□ 1.27
MRPL28-209ENST00000481453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.99■■□□□ 1.27
MRPL28-209ENST00000481453 RPAP2Q8IXW5 612 aaPredicted RBP22.98■■□□□ 1.27
MRPL28-209ENST00000481453 PHKG2P15735 406 aa22.97■■□□□ 1.27
MRPL28-209ENST00000481453 ANKRD45Q5TZF3 282 aa22.97■■□□□ 1.27
MRPL28-209ENST00000481453 PHAXQ9H814 394 aaKnown RBP22.97■■□□□ 1.27
MRPL28-209ENST00000481453 DCTPP1Q9H773 170 aa22.97■■□□□ 1.27
MRPL28-209ENST00000481453 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
MRPL28-209ENST00000481453 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
MRPL28-209ENST00000481453 CHPF2Q9P2E5 772 aa22.96■■□□□ 1.27
MRPL28-209ENST00000481453 PRDM11Q9NQV5 511 aa22.95■■□□□ 1.26
MRPL28-209ENST00000481453 SLKQ9H2G2 1235 aaPredicted RBP22.94■■□□□ 1.26
MRPL28-209ENST00000481453 COL5A2P05997 1499 aaPredicted RBP22.94■■□□□ 1.26
MRPL28-209ENST00000481453 MRC1P22897 1456 aa22.94■■□□□ 1.26
MRPL28-209ENST00000481453 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
MRPL28-209ENST00000481453 IL27Q8NEV9 243 aa22.93■■□□□ 1.26
MRPL28-209ENST00000481453 WDR17Q8IZU2 1322 aa22.93■■□□□ 1.26
MRPL28-209ENST00000481453 CYP27B1O15528 508 aa22.93■■□□□ 1.26
MRPL28-209ENST00000481453 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
MRPL28-209ENST00000481453 SLC52A2Q9HAB3 445 aa22.92■■□□□ 1.26
MRPL28-209ENST00000481453 PARP4Q9UKK3 1724 aaKnown RBP22.91■■□□□ 1.26
MRPL28-209ENST00000481453 CHMP4AQ9BY43 222 aa22.91■■□□□ 1.26
MRPL28-209ENST00000481453 TBC1D2Q9BYX2 928 aa22.91■■□□□ 1.26
MRPL28-209ENST00000481453 PRAMEF22A3QJZ6 481 aa22.9■■□□□ 1.26
MRPL28-209ENST00000481453 C5P01031 1676 aa22.9■■□□□ 1.26
MRPL28-209ENST00000481453 ANXA1P04083 346 aa22.89■■□□□ 1.26
MRPL28-209ENST00000481453 GNAI2P04899 355 aa22.89■■□□□ 1.25
MRPL28-209ENST00000481453 MFAP1P55081 439 aaKnown RBP22.88■■□□□ 1.25
MRPL28-209ENST00000481453 C22orf23Q9BZE7 217 aa22.88■■□□□ 1.25
MRPL28-209ENST00000481453 GNAI3P08754 354 aa22.88■■□□□ 1.25
MRPL28-209ENST00000481453 SLC39A6Q13433 755 aa22.88■■□□□ 1.25
MRPL28-209ENST00000481453 ZNF790Q6PG37 636 aa22.88■■□□□ 1.25
MRPL28-209ENST00000481453 DCAF5Q96JK2 942 aa22.88■■□□□ 1.25
MRPL28-209ENST00000481453 ANTXR1Q9H6X2 564 aa22.88■■□□□ 1.25
MRPL28-209ENST00000481453 ADCY9O60503 1353 aa22.88■■□□□ 1.25
MRPL28-209ENST00000481453 PROSER3Q2NL68 480 aa22.87■■□□□ 1.25
MRPL28-209ENST00000481453 NFATC2IPQ8NCF5 419 aa22.87■■□□□ 1.25
MRPL28-209ENST00000481453 USP44Q9H0E7 712 aa22.87■■□□□ 1.25
MRPL28-209ENST00000481453 DBF4Q9UBU7 674 aaPredicted RBP22.87■■□□□ 1.25
MRPL28-209ENST00000481453 BMP2KLQ5H9B9 411 aa22.86■■□□□ 1.25
MRPL28-209ENST00000481453 TOM1L2Q6ZVM7 507 aa22.86■■□□□ 1.25
MRPL28-209ENST00000481453 SHANK3Q9BYB0 1731 aa22.84■■□□□ 1.25
MRPL28-209ENST00000481453 PI4KAP2A4QPH2 592 aa22.84■■□□□ 1.25
MRPL28-209ENST00000481453 HMMRO75330 724 aa22.84■■□□□ 1.25
MRPL28-209ENST00000481453 PI4KAP1Q8N8J0 262 aa22.84■■□□□ 1.25
MRPL28-209ENST00000481453 BEND3Q5T5X7 828 aa22.84■■□□□ 1.25
MRPL28-209ENST00000481453 PLEKHM2Q8IWE5 1019 aa22.84■■□□□ 1.25
MRPL28-209ENST00000481453 DNAAF4Q8WXU2 420 aa22.84■■□□□ 1.25
MRPL28-209ENST00000481453 ROBO1Q9Y6N7 1651 aa22.83■■□□□ 1.25
MRPL28-209ENST00000481453 SRCIN1Q9C0H9 1055 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms