RNA–Protein interactions for RNA: ENST00000481320.5

NSMCE4A-209, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 1,345 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-209ENST00000481320 TUBGCP6Q96RT7 1819 aa25.32■■□□□ 1.64
NSMCE4A-209ENST00000481320 NFATC2IPQ8NCF5 419 aa25.32■■□□□ 1.64
NSMCE4A-209ENST00000481320 RBM42Q9BTD8 480 aaKnown RBP25.32■■□□□ 1.64
NSMCE4A-209ENST00000481320 U2SURPO15042 1029 aaKnown RBP25.31■■□□□ 1.64
NSMCE4A-209ENST00000481320 C4BP0C0L5 1744 aa25.29■■□□□ 1.64
NSMCE4A-209ENST00000481320 SSFA2P28290 1259 aa25.29■■□□□ 1.64
NSMCE4A-209ENST00000481320 LINC00116Q8NCU8 138 aa25.29■■□□□ 1.64
NSMCE4A-209ENST00000481320 ITPK1Q13572 414 aa25.28■■□□□ 1.64
NSMCE4A-209ENST00000481320 NUDCQ9Y266 331 aa25.28■■□□□ 1.64
NSMCE4A-209ENST00000481320 KDM6AO15550 1401 aaPredicted RBP25.28■■□□□ 1.64
NSMCE4A-209ENST00000481320 MAP3K5Q99683 1374 aa25.27■■□□□ 1.64
NSMCE4A-209ENST00000481320 KLHL34Q8N239 644 aa25.27■■□□□ 1.64
NSMCE4A-209ENST00000481320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.26■■□□□ 1.63
NSMCE4A-209ENST00000481320 PHF14O94880 888 aa25.26■■□□□ 1.63
NSMCE4A-209ENST00000481320 GNPATO15228 680 aa25.25■■□□□ 1.63
NSMCE4A-209ENST00000481320 MTHFSDQ2M296 383 aaKnown RBP25.25■■□□□ 1.63
NSMCE4A-209ENST00000481320 RC3H1Q5TC82 1133 aaKnown RBP25.25■■□□□ 1.63
NSMCE4A-209ENST00000481320 COL24A1Q17RW2 1714 aa25.25■■□□□ 1.63
NSMCE4A-209ENST00000481320 RNMTO43148 476 aaKnown RBP25.24■■□□□ 1.63
NSMCE4A-209ENST00000481320 MSL1Q68DK7 614 aa25.24■■□□□ 1.63
NSMCE4A-209ENST00000481320 PTCD1O75127 700 aaKnown RBP25.23■■□□□ 1.63
NSMCE4A-209ENST00000481320 SLC52A2Q9HAB3 445 aa25.23■■□□□ 1.63
NSMCE4A-209ENST00000481320 LGR6Q9HBX8 967 aa25.23■■□□□ 1.63
NSMCE4A-209ENST00000481320 RTCBQ9Y3I0 505 aaKnown RBP25.23■■□□□ 1.63
NSMCE4A-209ENST00000481320 PPP2R1AP30153 589 aa25.22■■□□□ 1.63
NSMCE4A-209ENST00000481320 SCN11AQ9UI33 1791 aa25.22■■□□□ 1.63
NSMCE4A-209ENST00000481320 UBR3Q6ZT12 1888 aa25.21■■□□□ 1.63
NSMCE4A-209ENST00000481320 TRAPPC3LQ5T215 181 aa25.21■■□□□ 1.63
NSMCE4A-209ENST00000481320 GAS2L2Q8NHY3 880 aa25.21■■□□□ 1.63
NSMCE4A-209ENST00000481320 SLC4A9Q96Q91 983 aa25.21■■□□□ 1.63
NSMCE4A-209ENST00000481320 ZNF831Q5JPB2 1677 aa25.2■■□□□ 1.63
NSMCE4A-209ENST00000481320 YY1P25490 414 aa25.2■■□□□ 1.62
NSMCE4A-209ENST00000481320 COL3A1P02461 1466 aaPredicted RBP25.19■■□□□ 1.62
NSMCE4A-209ENST00000481320 SMIM5Q71RC9 77 aa25.18■■□□□ 1.62
NSMCE4A-209ENST00000481320 AMIGO3Q86WK7 504 aa25.18■■□□□ 1.62
NSMCE4A-209ENST00000481320 GNAT3A8MTJ3 354 aa25.17■■□□□ 1.62
NSMCE4A-209ENST00000481320 RPS6KA4O75676 772 aa25.17■■□□□ 1.62
NSMCE4A-209ENST00000481320 ADRA2BP18089 450 aa25.17■■□□□ 1.62
NSMCE4A-209ENST00000481320 GPR162Q16538 588 aa25.17■■□□□ 1.62
NSMCE4A-209ENST00000481320 CNTNAP4Q9C0A0 1308 aa25.17■■□□□ 1.62
NSMCE4A-209ENST00000481320 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
NSMCE4A-209ENST00000481320 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.62
NSMCE4A-209ENST00000481320 CD2APQ9Y5K6 639 aa25.15■■□□□ 1.62
NSMCE4A-209ENST00000481320 RFC4P35249 363 aa25.14■■□□□ 1.62
NSMCE4A-209ENST00000481320 FCHSD2O94868 740 aa25.13■■□□□ 1.61
NSMCE4A-209ENST00000481320 PRKAR2BP31323 418 aa25.13■■□□□ 1.61
NSMCE4A-209ENST00000481320 TEFQ10587 303 aa25.13■■□□□ 1.61
NSMCE4A-209ENST00000481320 NLGN1Q8N2Q7 840 aa25.13■■□□□ 1.61
NSMCE4A-209ENST00000481320 ARHGEF1Q92888 912 aaKnown RBP25.13■■□□□ 1.61
NSMCE4A-209ENST00000481320 RSPH6AQ9H0K4 717 aa25.12■■□□□ 1.61
NSMCE4A-209ENST00000481320 VIRMAQ69YN4 1812 aaKnown RBP25.12■■□□□ 1.61
NSMCE4A-209ENST00000481320 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
NSMCE4A-209ENST00000481320 SLC39A6Q13433 755 aa25.12■■□□□ 1.61
NSMCE4A-209ENST00000481320 PELP1Q8IZL8 1130 aaKnown RBP25.12■■□□□ 1.61
NSMCE4A-209ENST00000481320 TTC5Q8N0Z6 440 aa25.11■■□□□ 1.61
NSMCE4A-209ENST00000481320 NLGN2Q8NFZ4 835 aa25.11■■□□□ 1.61
NSMCE4A-209ENST00000481320 IL17REQ8NFR9 667 aa25.1■■□□□ 1.61
NSMCE4A-209ENST00000481320 PHACTR3Q96KR7 559 aa25.1■■□□□ 1.61
NSMCE4A-209ENST00000481320 COL5A3P25940 1745 aaPredicted RBP25.09■■□□□ 1.61
NSMCE4A-209ENST00000481320 NEFMP07197 916 aa25.09■■□□□ 1.61
NSMCE4A-209ENST00000481320 VSIG10Q8N0Z9 540 aa25.09■■□□□ 1.61
NSMCE4A-209ENST00000481320 MRC1P22897 1456 aa25.08■■□□□ 1.61
NSMCE4A-209ENST00000481320 MYH14Q7Z406 1995 aaKnown RBP25.07■■□□□ 1.6
NSMCE4A-209ENST00000481320 DNAJC10Q8IXB1 793 aa25.07■■□□□ 1.6
NSMCE4A-209ENST00000481320 ADAMTS7Q9UKP4 1686 aa25.06■■□□□ 1.6
NSMCE4A-209ENST00000481320 GRIN3BO60391 1043 aa25.06■■□□□ 1.6
NSMCE4A-209ENST00000481320 MMP10P09238 476 aa25.06■■□□□ 1.6
NSMCE4A-209ENST00000481320 RTF1Q92541 710 aaKnown RBP25.06■■□□□ 1.6
NSMCE4A-209ENST00000481320 CCDC87Q9NVE4 849 aa25.06■■□□□ 1.6
NSMCE4A-209ENST00000481320 UTRNP46939 3433 aa25.05■■□□□ 1.6
NSMCE4A-209ENST00000481320 INTS5Q6P9B9 1019 aaKnown RBP25.05■■□□□ 1.6
NSMCE4A-209ENST00000481320 CYP19A1P11511 503 aaPredicted RBP25.04■■□□□ 1.6
NSMCE4A-209ENST00000481320 GYS1P13807 737 aa25.04■■□□□ 1.6
NSMCE4A-209ENST00000481320 DDX10Q13206 875 aaKnown RBP25.04■■□□□ 1.6
NSMCE4A-209ENST00000481320 RALBP1Q15311 655 aa25.04■■□□□ 1.6
NSMCE4A-209ENST00000481320 TEX13AQ9BXU3 409 aaPredicted RBP25.04■■□□□ 1.6
NSMCE4A-209ENST00000481320 PNNQ9H307 717 aaKnown RBP25.04■■□□□ 1.6
NSMCE4A-209ENST00000481320 CHD4Q14839 1912 aa25.03■■□□□ 1.6
NSMCE4A-209ENST00000481320 STARD3NLO95772 234 aa25.03■■□□□ 1.6
NSMCE4A-209ENST00000481320 ZNF790Q6PG37 636 aa25.03■■□□□ 1.6
NSMCE4A-209ENST00000481320 HTATSF1O43719 755 aaKnown RBP25.02■■□□□ 1.6
NSMCE4A-209ENST00000481320 ZPR1O75312 459 aa25.02■■□□□ 1.6
NSMCE4A-209ENST00000481320 PARP3Q9Y6F1 533 aa25.02■■□□□ 1.6
NSMCE4A-209ENST00000481320 CICQ96RK0 1608 aaPredicted RBP25.01■■□□□ 1.59
NSMCE4A-209ENST00000481320 TJP1Q07157 1748 aa25■■□□□ 1.59
NSMCE4A-209ENST00000481320 BTBD11A6QL63 1104 aa25■■□□□ 1.59
NSMCE4A-209ENST00000481320 CEMIPQ8WUJ3 1361 aa24.99■■□□□ 1.59
NSMCE4A-209ENST00000481320 ZNF496Q96IT1 587 aaPredicted RBP24.98■■□□□ 1.59
NSMCE4A-209ENST00000481320 FMNL2Q96PY5 1086 aa24.98■■□□□ 1.59
NSMCE4A-209ENST00000481320 KCPQ6ZWJ8 1503 aa24.98■■□□□ 1.59
NSMCE4A-209ENST00000481320 USP42Q9H9J4 1324 aaKnown RBP24.97■■□□□ 1.59
NSMCE4A-209ENST00000481320 TGFB2P61812 414 aa24.97■■□□□ 1.59
NSMCE4A-209ENST00000481320 SOS1Q07889 1333 aaPredicted RBP24.96■■□□□ 1.59
NSMCE4A-209ENST00000481320 YBX3P16989 372 aaKnown RBP eCLIP24.96■■□□□ 1.59
NSMCE4A-209ENST00000481320 SRP68Q9UHB9 627 aaKnown RBP24.96■■□□□ 1.59
NSMCE4A-209ENST00000481320 HEG1Q9ULI3 1381 aa24.96■■□□□ 1.59
NSMCE4A-209ENST00000481320 CANXP27824 592 aaKnown RBP24.94■■□□□ 1.58
NSMCE4A-209ENST00000481320 FKBP8Q14318 412 aa24.94■■□□□ 1.58
NSMCE4A-209ENST00000481320 MCM10Q7L590 875 aa24.94■■□□□ 1.58
NSMCE4A-209ENST00000481320 NPM2Q86SE8 214 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms