RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 SMARCC1Q92922 1105 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF1-207ENST00000481260 CFAP53Q96M91 514 aa15.33■□□□□ 0.04
RAPGEF1-207ENST00000481260 TAF1LQ8IZX4 1826 aa15.32■□□□□ 0.04
RAPGEF1-207ENST00000481260 HSP90AB1P08238 724 aaKnown RBP15.32■□□□□ 0.04
RAPGEF1-207ENST00000481260 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
RAPGEF1-207ENST00000481260 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.04
RAPGEF1-207ENST00000481260 SLC39A6Q13433 755 aa15.32■□□□□ 0.04
RAPGEF1-207ENST00000481260 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
RAPGEF1-207ENST00000481260 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
RAPGEF1-207ENST00000481260 ATP6V1AP38606 617 aa15.31■□□□□ 0.04
RAPGEF1-207ENST00000481260 MSL1Q68DK7 614 aa15.31■□□□□ 0.04
RAPGEF1-207ENST00000481260 IL17REQ8NFR9 667 aa15.31■□□□□ 0.04
RAPGEF1-207ENST00000481260 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
RAPGEF1-207ENST00000481260 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
RAPGEF1-207ENST00000481260 PHF14O94880 888 aa15.3■□□□□ 0.04
RAPGEF1-207ENST00000481260 UTRNP46939 3433 aa15.3■□□□□ 0.04
RAPGEF1-207ENST00000481260 GOLGB1Q14789 3259 aaKnown RBP15.3■□□□□ 0.04
RAPGEF1-207ENST00000481260 MTFR1LQ9H019 292 aa15.3■□□□□ 0.04
RAPGEF1-207ENST00000481260 SLC52A2Q9HAB3 445 aa15.3■□□□□ 0.04
RAPGEF1-207ENST00000481260 ADAMTS7Q9UKP4 1686 aa15.29■□□□□ 0.04
RAPGEF1-207ENST00000481260 MRC1P22897 1456 aa15.29■□□□□ 0.04
RAPGEF1-207ENST00000481260 MAP3K5Q99683 1374 aa15.28■□□□□ 0.04
RAPGEF1-207ENST00000481260 MSH5O43196 834 aa15.28■□□□□ 0.04
RAPGEF1-207ENST00000481260 QSER1Q2KHR3 1735 aa15.28■□□□□ 0.04
RAPGEF1-207ENST00000481260 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF1-207ENST00000481260 DCTN1Q14203 1278 aa15.27■□□□□ 0.04
RAPGEF1-207ENST00000481260 AK7Q96M32 723 aa15.27■□□□□ 0.04
RAPGEF1-207ENST00000481260 PPP1R1BQ9UD71 204 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF1-207ENST00000481260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
RAPGEF1-207ENST00000481260 GNPATO15228 680 aa15.26■□□□□ 0.03
RAPGEF1-207ENST00000481260 KCNQ3O43525 872 aa15.26■□□□□ 0.03
RAPGEF1-207ENST00000481260 NUDCQ9Y266 331 aa15.26■□□□□ 0.03
RAPGEF1-207ENST00000481260 KCPQ6ZWJ8 1503 aa15.26■□□□□ 0.03
RAPGEF1-207ENST00000481260 VIRMAQ69YN4 1812 aaKnown RBP15.26■□□□□ 0.03
RAPGEF1-207ENST00000481260 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
RAPGEF1-207ENST00000481260 GNAT3A8MTJ3 354 aa15.25■□□□□ 0.03
RAPGEF1-207ENST00000481260 RALBP1Q15311 655 aa15.25■□□□□ 0.03
RAPGEF1-207ENST00000481260 MCM10Q7L590 875 aa15.25■□□□□ 0.03
RAPGEF1-207ENST00000481260 GAS2L2Q8NHY3 880 aa15.25■□□□□ 0.03
RAPGEF1-207ENST00000481260 PLEKHF1Q96S99 279 aa15.25■□□□□ 0.03
RAPGEF1-207ENST00000481260 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF1-207ENST00000481260 TJP1Q07157 1748 aa15.25■□□□□ 0.03
RAPGEF1-207ENST00000481260 FCHSD2O94868 740 aa15.24■□□□□ 0.03
RAPGEF1-207ENST00000481260 DNAJC10Q8IXB1 793 aa15.24■□□□□ 0.03
RAPGEF1-207ENST00000481260 COL5A3P25940 1745 aaPredicted RBP15.23■□□□□ 0.03
RAPGEF1-207ENST00000481260 ARXQ96QS3 562 aa15.23■□□□□ 0.03
RAPGEF1-207ENST00000481260 MYH14Q7Z406 1995 aaKnown RBP15.23■□□□□ 0.03
RAPGEF1-207ENST00000481260 CEMIPQ8WUJ3 1361 aa15.23■□□□□ 0.03
RAPGEF1-207ENST00000481260 MYBBP1AQ9BQG0 1328 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-207ENST00000481260 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-207ENST00000481260 THUMPD2Q9BTF0 503 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-207ENST00000481260 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF1-207ENST00000481260 COL24A1Q17RW2 1714 aa15.22■□□□□ 0.03
RAPGEF1-207ENST00000481260 CRKLP46109 303 aaKnown RBP15.21■□□□□ 0.03
RAPGEF1-207ENST00000481260 CCDC184Q52MB2 194 aa15.21■□□□□ 0.03
RAPGEF1-207ENST00000481260 SLC16A10Q8TF71 515 aa15.21■□□□□ 0.03
RAPGEF1-207ENST00000481260 SYT17Q9BSW7 474 aa15.21■□□□□ 0.03
RAPGEF1-207ENST00000481260 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.02
RAPGEF1-207ENST00000481260 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
RAPGEF1-207ENST00000481260 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
RAPGEF1-207ENST00000481260 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
RAPGEF1-207ENST00000481260 NLGN2Q8NFZ4 835 aa15.2■□□□□ 0.02
RAPGEF1-207ENST00000481260 ZNF496Q96IT1 587 aaPredicted RBP15.2■□□□□ 0.02
RAPGEF1-207ENST00000481260 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
RAPGEF1-207ENST00000481260 ZNF831Q5JPB2 1677 aa15.19■□□□□ 0.02
RAPGEF1-207ENST00000481260 PRAMEF22A3QJZ6 481 aa15.19■□□□□ 0.02
RAPGEF1-207ENST00000481260 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF1-207ENST00000481260 SSFA2P28290 1259 aa15.19■□□□□ 0.02
RAPGEF1-207ENST00000481260 ARHGEF1Q92888 912 aaKnown RBP15.19■□□□□ 0.02
RAPGEF1-207ENST00000481260 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
RAPGEF1-207ENST00000481260 CYP19A1P11511 503 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF1-207ENST00000481260 TEFQ10587 303 aa15.18■□□□□ 0.02
RAPGEF1-207ENST00000481260 RC3H1Q5TC82 1133 aaKnown RBP15.18■□□□□ 0.02
RAPGEF1-207ENST00000481260 UBR2Q8IWV8 1755 aa15.18■□□□□ 0.02
RAPGEF1-207ENST00000481260 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
RAPGEF1-207ENST00000481260 ZNF790Q6PG37 636 aa15.17■□□□□ 0.02
RAPGEF1-207ENST00000481260 ZBTB1Q9Y2K1 713 aa15.17■□□□□ 0.02
RAPGEF1-207ENST00000481260 RRP7AQ9Y3A4 280 aaKnown RBP15.17■□□□□ 0.02
RAPGEF1-207ENST00000481260 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
RAPGEF1-207ENST00000481260 BTBD11A6QL63 1104 aa15.16■□□□□ 0.02
RAPGEF1-207ENST00000481260 POLD1P28340 1107 aa15.16■□□□□ 0.02
RAPGEF1-207ENST00000481260 NFE2L2Q16236 605 aa15.16■□□□□ 0.02
RAPGEF1-207ENST00000481260 TRAPPC3LQ5T215 181 aa15.16■□□□□ 0.02
RAPGEF1-207ENST00000481260 FLAD1Q8NFF5 587 aa15.16■□□□□ 0.02
RAPGEF1-207ENST00000481260 CICQ96RK0 1608 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF1-207ENST00000481260 PIP4K2AP48426 406 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-207ENST00000481260 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
RAPGEF1-207ENST00000481260 ADAMTS8Q9UP79 889 aa15.15■□□□□ 0.02
RAPGEF1-207ENST00000481260 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
RAPGEF1-207ENST00000481260 C4AP0C0L4 1744 aa15.14■□□□□ 0.01
RAPGEF1-207ENST00000481260 HEG1Q9ULI3 1381 aa15.14■□□□□ 0.01
RAPGEF1-207ENST00000481260 DLG5Q8TDM6 1919 aa15.14■□□□□ 0.01
RAPGEF1-207ENST00000481260 SENP3-EIF4A1A0A087X0R7 540 aa15.14■□□□□ 0.01
RAPGEF1-207ENST00000481260 GYS1P13807 737 aa15.14■□□□□ 0.01
RAPGEF1-207ENST00000481260 TTC5Q8N0Z6 440 aa15.14■□□□□ 0.01
RAPGEF1-207ENST00000481260 RTF1Q92541 710 aaKnown RBP15.14■□□□□ 0.01
RAPGEF1-207ENST00000481260 MMP10P09238 476 aa15.13■□□□□ 0.01
RAPGEF1-207ENST00000481260 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
RAPGEF1-207ENST00000481260 FKBP8Q14318 412 aa15.13■□□□□ 0.01
RAPGEF1-207ENST00000481260 WWC3Q9ULE0 1092 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms