RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 AKAP4Q5JQC9 854 aa22.88■■□□□ 1.25
HSPG2-209ENST00000480900 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
HSPG2-209ENST00000480900 COL5A3P25940 1745 aaPredicted RBP22.86■■□□□ 1.25
HSPG2-209ENST00000480900 MRC1P22897 1456 aa22.85■■□□□ 1.25
HSPG2-209ENST00000480900 FLAD1Q8NFF5 587 aa22.85■■□□□ 1.25
HSPG2-209ENST00000480900 COL23A1Q86Y22 540 aaPredicted RBP22.84■■□□□ 1.25
HSPG2-209ENST00000480900 AK7Q96M32 723 aa22.84■■□□□ 1.25
HSPG2-209ENST00000480900 ATP6V1AP38606 617 aa22.83■■□□□ 1.25
HSPG2-209ENST00000480900 MTHFSDQ2M296 383 aaKnown RBP22.83■■□□□ 1.25
HSPG2-209ENST00000480900 LINC00116Q8NCU8 138 aa22.83■■□□□ 1.25
HSPG2-209ENST00000480900 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
HSPG2-209ENST00000480900 ITPK1Q13572 414 aa22.82■■□□□ 1.24
HSPG2-209ENST00000480900 NFATC2IPQ8NCF5 419 aa22.82■■□□□ 1.24
HSPG2-209ENST00000480900 NUDCQ9Y266 331 aa22.82■■□□□ 1.24
HSPG2-209ENST00000480900 ARXQ96QS3 562 aa22.81■■□□□ 1.24
HSPG2-209ENST00000480900 MYH14Q7Z406 1995 aaKnown RBP22.81■■□□□ 1.24
HSPG2-209ENST00000480900 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
HSPG2-209ENST00000480900 MSH5O43196 834 aa22.8■■□□□ 1.24
HSPG2-209ENST00000480900 POLD1P28340 1107 aa22.8■■□□□ 1.24
HSPG2-209ENST00000480900 SLC52A2Q9HAB3 445 aa22.8■■□□□ 1.24
HSPG2-209ENST00000480900 MAP3K5Q99683 1374 aa22.79■■□□□ 1.24
HSPG2-209ENST00000480900 GAS2L2Q8NHY3 880 aa22.79■■□□□ 1.24
HSPG2-209ENST00000480900 SLC4A9Q96Q91 983 aa22.79■■□□□ 1.24
HSPG2-209ENST00000480900 RBM42Q9BTD8 480 aaKnown RBP22.79■■□□□ 1.24
HSPG2-209ENST00000480900 LGR6Q9HBX8 967 aa22.79■■□□□ 1.24
HSPG2-209ENST00000480900 SSFA2P28290 1259 aa22.78■■□□□ 1.24
HSPG2-209ENST00000480900 TJP1Q07157 1748 aa22.78■■□□□ 1.24
HSPG2-209ENST00000480900 FHDC1Q9C0D6 1143 aaPredicted RBP22.78■■□□□ 1.24
HSPG2-209ENST00000480900 RSPH6AQ9H0K4 717 aa22.78■■□□□ 1.24
HSPG2-209ENST00000480900 SIPA1L3O60292 1781 aaPredicted RBP22.77■■□□□ 1.24
HSPG2-209ENST00000480900 AMIGO3Q86WK7 504 aa22.77■■□□□ 1.24
HSPG2-209ENST00000480900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.76■■□□□ 1.23
HSPG2-209ENST00000480900 PRKAR2BP31323 418 aa22.76■■□□□ 1.23
HSPG2-209ENST00000480900 SYT17Q9BSW7 474 aa22.76■■□□□ 1.23
HSPG2-209ENST00000480900 UBR2Q8IWV8 1755 aa22.76■■□□□ 1.23
HSPG2-209ENST00000480900 GNPATO15228 680 aa22.75■■□□□ 1.23
HSPG2-209ENST00000480900 U2AF1L5P0DN76 240 aaPredicted RBP22.75■■□□□ 1.23
HSPG2-209ENST00000480900 U2AF1Q01081 240 aaKnown RBP eCLIP22.75■■□□□ 1.23
HSPG2-209ENST00000480900 CNTNAP4Q9C0A0 1308 aa22.75■■□□□ 1.23
HSPG2-209ENST00000480900 GNAT3A8MTJ3 354 aa22.74■■□□□ 1.23
HSPG2-209ENST00000480900 PTCD1O75127 700 aaKnown RBP22.74■■□□□ 1.23
HSPG2-209ENST00000480900 FCHSD2O94868 740 aa22.74■■□□□ 1.23
HSPG2-209ENST00000480900 PHF14O94880 888 aa22.74■■□□□ 1.23
HSPG2-209ENST00000480900 RC3H1Q5TC82 1133 aaKnown RBP22.74■■□□□ 1.23
HSPG2-209ENST00000480900 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
HSPG2-209ENST00000480900 DCAF8L1A6NGE4 600 aa22.72■■□□□ 1.23
HSPG2-209ENST00000480900 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
HSPG2-209ENST00000480900 RALBP1Q15311 655 aa22.72■■□□□ 1.23
HSPG2-209ENST00000480900 MSL1Q68DK7 614 aa22.72■■□□□ 1.23
HSPG2-209ENST00000480900 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
HSPG2-209ENST00000480900 KCPQ6ZWJ8 1503 aa22.72■■□□□ 1.23
HSPG2-209ENST00000480900 C4AP0C0L4 1744 aa22.71■■□□□ 1.23
HSPG2-209ENST00000480900 SMIM5Q71RC9 77 aa22.7■■□□□ 1.22
HSPG2-209ENST00000480900 RTCBQ9Y3I0 505 aaKnown RBP22.7■■□□□ 1.22
HSPG2-209ENST00000480900 DLG5Q8TDM6 1919 aa22.69■■□□□ 1.22
HSPG2-209ENST00000480900 CEMIPQ8WUJ3 1361 aa22.69■■□□□ 1.22
HSPG2-209ENST00000480900 ADRA2BP18089 450 aa22.69■■□□□ 1.22
HSPG2-209ENST00000480900 IL17REQ8NFR9 667 aa22.69■■□□□ 1.22
HSPG2-209ENST00000480900 TEFQ10587 303 aa22.68■■□□□ 1.22
HSPG2-209ENST00000480900 SLC39A6Q13433 755 aa22.68■■□□□ 1.22
HSPG2-209ENST00000480900 RPS6KA4O75676 772 aa22.67■■□□□ 1.22
HSPG2-209ENST00000480900 CRKLP46109 303 aaKnown RBP22.67■■□□□ 1.22
HSPG2-209ENST00000480900 TRAPPC3LQ5T215 181 aa22.67■■□□□ 1.22
HSPG2-209ENST00000480900 KLHL34Q8N239 644 aa22.66■■□□□ 1.22
HSPG2-209ENST00000480900 CHD4Q14839 1912 aa22.65■■□□□ 1.22
HSPG2-209ENST00000480900 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.21
HSPG2-209ENST00000480900 VSIG10Q8N0Z9 540 aa22.64■■□□□ 1.21
HSPG2-209ENST00000480900 TTC5Q8N0Z6 440 aa22.63■■□□□ 1.21
HSPG2-209ENST00000480900 ARHGEF1Q92888 912 aaKnown RBP22.62■■□□□ 1.21
HSPG2-209ENST00000480900 MYBBP1AQ9BQG0 1328 aaKnown RBP22.61■■□□□ 1.21
HSPG2-209ENST00000480900 HTATSF1O43719 755 aaKnown RBP22.61■■□□□ 1.21
HSPG2-209ENST00000480900 NEFMP07197 916 aa22.61■■□□□ 1.21
HSPG2-209ENST00000480900 INTS5Q6P9B9 1019 aaKnown RBP22.61■■□□□ 1.21
HSPG2-209ENST00000480900 ZNF790Q6PG37 636 aa22.61■■□□□ 1.21
HSPG2-209ENST00000480900 RTF1Q92541 710 aaKnown RBP22.61■■□□□ 1.21
HSPG2-209ENST00000480900 CCDC87Q9NVE4 849 aa22.61■■□□□ 1.21
HSPG2-209ENST00000480900 CYP19A1P11511 503 aaPredicted RBP22.6■■□□□ 1.21
HSPG2-209ENST00000480900 RFC4P35249 363 aa22.6■■□□□ 1.21
HSPG2-209ENST00000480900 CD2APQ9Y5K6 639 aa22.6■■□□□ 1.21
HSPG2-209ENST00000480900 KIF13BQ9NQT8 1826 aa22.59■■□□□ 1.21
HSPG2-209ENST00000480900 NLGN1Q8N2Q7 840 aa22.59■■□□□ 1.21
HSPG2-209ENST00000480900 NLGN2Q8NFZ4 835 aa22.59■■□□□ 1.21
HSPG2-209ENST00000480900 PNNQ9H307 717 aaKnown RBP22.59■■□□□ 1.21
HSPG2-209ENST00000480900 ZNF496Q96IT1 587 aaPredicted RBP22.58■■□□□ 1.21
HSPG2-209ENST00000480900 PLEKHF1Q96S99 279 aa22.58■■□□□ 1.21
HSPG2-209ENST00000480900 HEG1Q9ULI3 1381 aa22.58■■□□□ 1.21
HSPG2-209ENST00000480900 GYS1P13807 737 aa22.57■■□□□ 1.2
HSPG2-209ENST00000480900 MCM10Q7L590 875 aa22.57■■□□□ 1.2
HSPG2-209ENST00000480900 SOS1Q07889 1333 aaPredicted RBP22.57■■□□□ 1.2
HSPG2-209ENST00000480900 BTBD11A6QL63 1104 aa22.56■■□□□ 1.2
HSPG2-209ENST00000480900 MMP10P09238 476 aa22.56■■□□□ 1.2
HSPG2-209ENST00000480900 USP42Q9H9J4 1324 aaKnown RBP22.56■■□□□ 1.2
HSPG2-209ENST00000480900 FMNL2Q96PY5 1086 aa22.55■■□□□ 1.2
HSPG2-209ENST00000480900 TEX13AQ9BXU3 409 aaPredicted RBP22.55■■□□□ 1.2
HSPG2-209ENST00000480900 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
HSPG2-209ENST00000480900 STARD3NLO95772 234 aa22.54■■□□□ 1.2
HSPG2-209ENST00000480900 NFE2L2Q16236 605 aa22.54■■□□□ 1.2
HSPG2-209ENST00000480900 GPR162Q16538 588 aa22.54■■□□□ 1.2
HSPG2-209ENST00000480900 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
HSPG2-209ENST00000480900 UTRNP46939 3433 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms