RNA–Protein interactions for RNA: ENST00000480784.1

NEB-211, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-211ENST00000480784 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
NEB-211ENST00000480784 CCDC146Q8IYE0 955 aa18.65■□□□□ 0.58
NEB-211ENST00000480784 PDGFDQ9GZP0 370 aaPredicted RBP18.65■□□□□ 0.58
NEB-211ENST00000480784 ITGB4P16144 1822 aa18.65■□□□□ 0.58
NEB-211ENST00000480784 SLC39A6Q13433 755 aa18.64■□□□□ 0.57
NEB-211ENST00000480784 ITPK1Q13572 414 aa18.64■□□□□ 0.57
NEB-211ENST00000480784 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
NEB-211ENST00000480784 MCM10Q7L590 875 aa18.64■□□□□ 0.57
NEB-211ENST00000480784 PNNQ9H307 717 aaKnown RBP18.64■□□□□ 0.57
NEB-211ENST00000480784 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
NEB-211ENST00000480784 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
NEB-211ENST00000480784 CEMIPQ8WUJ3 1361 aa18.63■□□□□ 0.57
NEB-211ENST00000480784 NEFMP07197 916 aa18.62■□□□□ 0.57
NEB-211ENST00000480784 ATP6V1AP38606 617 aa18.62■□□□□ 0.57
NEB-211ENST00000480784 MRC1P22897 1456 aa18.62■□□□□ 0.57
NEB-211ENST00000480784 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
NEB-211ENST00000480784 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
NEB-211ENST00000480784 HTATSF1O43719 755 aaKnown RBP18.61■□□□□ 0.57
NEB-211ENST00000480784 PTCD1O75127 700 aaKnown RBP18.61■□□□□ 0.57
NEB-211ENST00000480784 LINC00116Q8NCU8 138 aa18.61■□□□□ 0.57
NEB-211ENST00000480784 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
NEB-211ENST00000480784 TEFQ10587 303 aa18.6■□□□□ 0.57
NEB-211ENST00000480784 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
NEB-211ENST00000480784 LY75O60449 1722 aa18.6■□□□□ 0.57
NEB-211ENST00000480784 RUNDC1Q96C34 613 aa18.59■□□□□ 0.57
NEB-211ENST00000480784 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
NEB-211ENST00000480784 MRS2Q9HD23 443 aa18.59■□□□□ 0.57
NEB-211ENST00000480784 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
NEB-211ENST00000480784 SCN11AQ9UI33 1791 aa18.58■□□□□ 0.57
NEB-211ENST00000480784 KCNQ3O43525 872 aa18.58■□□□□ 0.56
NEB-211ENST00000480784 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
NEB-211ENST00000480784 SMIM5Q71RC9 77 aa18.58■□□□□ 0.56
NEB-211ENST00000480784 AMIGO3Q86WK7 504 aa18.58■□□□□ 0.56
NEB-211ENST00000480784 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.56
NEB-211ENST00000480784 TFCP2L1Q9NZI6 479 aa18.58■□□□□ 0.56
NEB-211ENST00000480784 PNPLA7Q6ZV29 1317 aa18.57■□□□□ 0.56
NEB-211ENST00000480784 RIPK4P57078 832 aa18.57■□□□□ 0.56
NEB-211ENST00000480784 BTBD11A6QL63 1104 aa18.55■□□□□ 0.56
NEB-211ENST00000480784 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
NEB-211ENST00000480784 ZNF790Q6PG37 636 aa18.55■□□□□ 0.56
NEB-211ENST00000480784 ZBTB7AO95365 584 aa18.54■□□□□ 0.56
NEB-211ENST00000480784 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
NEB-211ENST00000480784 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
NEB-211ENST00000480784 ZNF496Q96IT1 587 aaPredicted RBP18.54■□□□□ 0.56
NEB-211ENST00000480784 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
NEB-211ENST00000480784 APAF1O14727 1248 aa18.53■□□□□ 0.56
NEB-211ENST00000480784 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
NEB-211ENST00000480784 AK7Q96M32 723 aa18.53■□□□□ 0.56
NEB-211ENST00000480784 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
NEB-211ENST00000480784 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
NEB-211ENST00000480784 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
NEB-211ENST00000480784 KCPQ6ZWJ8 1503 aa18.52■□□□□ 0.56
NEB-211ENST00000480784 GNPATO15228 680 aa18.51■□□□□ 0.55
NEB-211ENST00000480784 HMGB2P26583 209 aaKnown RBP18.51■□□□□ 0.55
NEB-211ENST00000480784 SENP3-EIF4A1A0A087X0R7 540 aa18.5■□□□□ 0.55
NEB-211ENST00000480784 PHF14O94880 888 aa18.5■□□□□ 0.55
NEB-211ENST00000480784 CRKLP46109 303 aaKnown RBP18.5■□□□□ 0.55
NEB-211ENST00000480784 RC3H1Q5TC82 1133 aaKnown RBP18.5■□□□□ 0.55
NEB-211ENST00000480784 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
NEB-211ENST00000480784 CNTNAP4Q9C0A0 1308 aa18.49■□□□□ 0.55
NEB-211ENST00000480784 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
NEB-211ENST00000480784 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
NEB-211ENST00000480784 SPON1Q9HCB6 807 aa18.49■□□□□ 0.55
NEB-211ENST00000480784 C4BP0C0L5 1744 aa18.49■□□□□ 0.55
NEB-211ENST00000480784 C5P01031 1676 aa18.48■□□□□ 0.55
NEB-211ENST00000480784 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
NEB-211ENST00000480784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.48■□□□□ 0.55
NEB-211ENST00000480784 MSH5O43196 834 aa18.48■□□□□ 0.55
NEB-211ENST00000480784 LMOD3Q0VAK6 560 aa18.48■□□□□ 0.55
NEB-211ENST00000480784 FMNL2Q96PY5 1086 aa18.48■□□□□ 0.55
NEB-211ENST00000480784 MTFR1LQ9H019 292 aa18.48■□□□□ 0.55
NEB-211ENST00000480784 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
NEB-211ENST00000480784 PRAMEF22A3QJZ6 481 aa18.47■□□□□ 0.55
NEB-211ENST00000480784 RPS6KA4O75676 772 aa18.47■□□□□ 0.55
NEB-211ENST00000480784 SSFA2P28290 1259 aa18.47■□□□□ 0.55
NEB-211ENST00000480784 PTGER2P43116 358 aa18.47■□□□□ 0.55
NEB-211ENST00000480784 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
NEB-211ENST00000480784 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
NEB-211ENST00000480784 SLC16A10Q8TF71 515 aa18.46■□□□□ 0.55
NEB-211ENST00000480784 SGIP1Q9BQI5 828 aa18.46■□□□□ 0.55
NEB-211ENST00000480784 RTCBQ9Y3I0 505 aaKnown RBP18.46■□□□□ 0.55
NEB-211ENST00000480784 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
NEB-211ENST00000480784 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
NEB-211ENST00000480784 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
NEB-211ENST00000480784 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
NEB-211ENST00000480784 CCDC87Q9NVE4 849 aa18.45■□□□□ 0.54
NEB-211ENST00000480784 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
NEB-211ENST00000480784 ZNF831Q5JPB2 1677 aa18.44■□□□□ 0.54
NEB-211ENST00000480784 EIF4A1P60842 406 aaKnown RBP18.44■□□□□ 0.54
NEB-211ENST00000480784 TRAPPC3LQ5T215 181 aa18.44■□□□□ 0.54
NEB-211ENST00000480784 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
NEB-211ENST00000480784 ZBTB1Q9Y2K1 713 aa18.44■□□□□ 0.54
NEB-211ENST00000480784 USP16Q9Y5T5 823 aa18.44■□□□□ 0.54
NEB-211ENST00000480784 DLG5Q8TDM6 1919 aa18.43■□□□□ 0.54
NEB-211ENST00000480784 TSPYL4Q9UJ04 414 aa18.43■□□□□ 0.54
NEB-211ENST00000480784 TJP1Q07157 1748 aa18.43■□□□□ 0.54
NEB-211ENST00000480784 TUBGCP6Q96RT7 1819 aa18.42■□□□□ 0.54
NEB-211ENST00000480784 STARD3NLO95772 234 aa18.42■□□□□ 0.54
NEB-211ENST00000480784 A1BGP04217 495 aa18.42■□□□□ 0.54
NEB-211ENST00000480784 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms