RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 KCNQ4P56696 695 aa15.42■□□□□ 0.06
CCM2-213ENST00000480658 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
CCM2-213ENST00000480658 ATG3Q9NT62 314 aa15.41■□□□□ 0.06
CCM2-213ENST00000480658 CICQ96RK0 1608 aaPredicted RBP15.41■□□□□ 0.06
CCM2-213ENST00000480658 KDM6AO15550 1401 aaPredicted RBP15.41■□□□□ 0.06
CCM2-213ENST00000480658 YY1P25490 414 aa15.4■□□□□ 0.06
CCM2-213ENST00000480658 AEBP1Q8IUX7 1158 aa15.4■□□□□ 0.06
CCM2-213ENST00000480658 ASAP1Q9ULH1 1129 aa15.4■□□□□ 0.06
CCM2-213ENST00000480658 MRC1P22897 1456 aa15.4■□□□□ 0.06
CCM2-213ENST00000480658 RC3H1Q5TC82 1133 aaKnown RBP15.39■□□□□ 0.05
CCM2-213ENST00000480658 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
CCM2-213ENST00000480658 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
CCM2-213ENST00000480658 CNTNAP4Q9C0A0 1308 aa15.39■□□□□ 0.05
CCM2-213ENST00000480658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.38■□□□□ 0.05
CCM2-213ENST00000480658 GNPATO15228 680 aa15.38■□□□□ 0.05
CCM2-213ENST00000480658 RTCBQ9Y3I0 505 aaKnown RBP15.38■□□□□ 0.05
CCM2-213ENST00000480658 CD2APQ9Y5K6 639 aa15.38■□□□□ 0.05
CCM2-213ENST00000480658 SCN11AQ9UI33 1791 aa15.37■□□□□ 0.05
CCM2-213ENST00000480658 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
CCM2-213ENST00000480658 COL3A1P02461 1466 aaPredicted RBP15.37■□□□□ 0.05
CCM2-213ENST00000480658 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
CCM2-213ENST00000480658 LINC00116Q8NCU8 138 aa15.36■□□□□ 0.05
CCM2-213ENST00000480658 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
CCM2-213ENST00000480658 COL5A3P25940 1745 aaPredicted RBP15.36■□□□□ 0.05
CCM2-213ENST00000480658 ADAMTS7Q9UKP4 1686 aa15.35■□□□□ 0.05
CCM2-213ENST00000480658 GRIN3BO60391 1043 aa15.35■□□□□ 0.05
CCM2-213ENST00000480658 PHF14O94880 888 aa15.35■□□□□ 0.05
CCM2-213ENST00000480658 TRAPPC3LQ5T215 181 aa15.35■□□□□ 0.05
CCM2-213ENST00000480658 NFATC2IPQ8NCF5 419 aa15.35■□□□□ 0.05
CCM2-213ENST00000480658 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
CCM2-213ENST00000480658 U2SURPO15042 1029 aaKnown RBP15.34■□□□□ 0.05
CCM2-213ENST00000480658 HMOX1P09601 288 aa15.34■□□□□ 0.05
CCM2-213ENST00000480658 ITPK1Q13572 414 aa15.34■□□□□ 0.05
CCM2-213ENST00000480658 GPR162Q16538 588 aa15.34■□□□□ 0.05
CCM2-213ENST00000480658 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
CCM2-213ENST00000480658 NEFMP07197 916 aa15.32■□□□□ 0.04
CCM2-213ENST00000480658 RFC4P35249 363 aa15.32■□□□□ 0.04
CCM2-213ENST00000480658 TTC5Q8N0Z6 440 aa15.32■□□□□ 0.04
CCM2-213ENST00000480658 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
CCM2-213ENST00000480658 GNAT3A8MTJ3 354 aa15.31■□□□□ 0.04
CCM2-213ENST00000480658 RNMTO43148 476 aaKnown RBP15.31■□□□□ 0.04
CCM2-213ENST00000480658 RPS6KA4O75676 772 aa15.31■□□□□ 0.04
CCM2-213ENST00000480658 MSL1Q68DK7 614 aa15.31■□□□□ 0.04
CCM2-213ENST00000480658 PTCD1O75127 700 aaKnown RBP15.3■□□□□ 0.04
CCM2-213ENST00000480658 TEFQ10587 303 aa15.3■□□□□ 0.04
CCM2-213ENST00000480658 MTHFSDQ2M296 383 aaKnown RBP15.3■□□□□ 0.04
CCM2-213ENST00000480658 TEX13AQ9BXU3 409 aaPredicted RBP15.29■□□□□ 0.04
CCM2-213ENST00000480658 PNNQ9H307 717 aaKnown RBP15.29■□□□□ 0.04
CCM2-213ENST00000480658 TJP1Q07157 1748 aa15.29■□□□□ 0.04
CCM2-213ENST00000480658 CHD4Q14839 1912 aa15.28■□□□□ 0.04
CCM2-213ENST00000480658 FCHSD2O94868 740 aa15.28■□□□□ 0.04
CCM2-213ENST00000480658 PPP2R1AP30153 589 aa15.28■□□□□ 0.04
CCM2-213ENST00000480658 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
CCM2-213ENST00000480658 STARD3NLO95772 234 aa15.27■□□□□ 0.04
CCM2-213ENST00000480658 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.04
CCM2-213ENST00000480658 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.04
CCM2-213ENST00000480658 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
CCM2-213ENST00000480658 MMP10P09238 476 aa15.26■□□□□ 0.03
CCM2-213ENST00000480658 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
CCM2-213ENST00000480658 TGFB2P61812 414 aa15.26■□□□□ 0.03
CCM2-213ENST00000480658 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCM2-213ENST00000480658 CNGB1Q14028 1251 aaPredicted RBP15.26■□□□□ 0.03
CCM2-213ENST00000480658 NLGN2Q8NFZ4 835 aa15.26■□□□□ 0.03
CCM2-213ENST00000480658 ARHGEF1Q92888 912 aaKnown RBP15.26■□□□□ 0.03
CCM2-213ENST00000480658 CCDC87Q9NVE4 849 aa15.26■□□□□ 0.03
CCM2-213ENST00000480658 PARP3Q9Y6F1 533 aa15.26■□□□□ 0.03
CCM2-213ENST00000480658 KCPQ6ZWJ8 1503 aa15.26■□□□□ 0.03
CCM2-213ENST00000480658 VIRMAQ69YN4 1812 aaKnown RBP15.26■□□□□ 0.03
CCM2-213ENST00000480658 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
CCM2-213ENST00000480658 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
CCM2-213ENST00000480658 HTATSF1O43719 755 aaKnown RBP15.25■□□□□ 0.03
CCM2-213ENST00000480658 PRKAR2BP31323 418 aa15.25■□□□□ 0.03
CCM2-213ENST00000480658 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
CCM2-213ENST00000480658 LGR6Q9HBX8 967 aa15.25■□□□□ 0.03
CCM2-213ENST00000480658 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
CCM2-213ENST00000480658 USP42Q9H9J4 1324 aaKnown RBP15.24■□□□□ 0.03
CCM2-213ENST00000480658 ZPR1O75312 459 aa15.24■□□□□ 0.03
CCM2-213ENST00000480658 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
CCM2-213ENST00000480658 AMIGO3Q86WK7 504 aa15.24■□□□□ 0.03
CCM2-213ENST00000480658 UTRNP46939 3433 aa15.24■□□□□ 0.03
CCM2-213ENST00000480658 KIF13BQ9NQT8 1826 aa15.23■□□□□ 0.03
CCM2-213ENST00000480658 A0A087WZG4 1122 aa15.23■□□□□ 0.03
CCM2-213ENST00000480658 GYS1P13807 737 aa15.23■□□□□ 0.03
CCM2-213ENST00000480658 RALBP1Q15311 655 aa15.23■□□□□ 0.03
CCM2-213ENST00000480658 ZNF790Q6PG37 636 aa15.23■□□□□ 0.03
CCM2-213ENST00000480658 C10orf71Q711Q0 1435 aa15.23■□□□□ 0.03
CCM2-213ENST00000480658 FMNL2Q96PY5 1086 aa15.22■□□□□ 0.03
CCM2-213ENST00000480658 COL15A1P39059 1388 aa15.22■□□□□ 0.03
CCM2-213ENST00000480658 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.03
CCM2-213ENST00000480658 SOS1Q07889 1333 aaPredicted RBP15.21■□□□□ 0.03
CCM2-213ENST00000480658 CYP19A1P11511 503 aaPredicted RBP15.21■□□□□ 0.03
CCM2-213ENST00000480658 HEG1Q9ULI3 1381 aa15.21■□□□□ 0.02
CCM2-213ENST00000480658 BTBD11A6QL63 1104 aa15.2■□□□□ 0.02
CCM2-213ENST00000480658 INTS5Q6P9B9 1019 aaKnown RBP15.2■□□□□ 0.02
CCM2-213ENST00000480658 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
CCM2-213ENST00000480658 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
CCM2-213ENST00000480658 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
CCM2-213ENST00000480658 IL17REQ8NFR9 667 aa15.19■□□□□ 0.02
CCM2-213ENST00000480658 NARFQ9UHQ1 456 aa15.19■□□□□ 0.02
CCM2-213ENST00000480658 MAPK8IP3Q9UPT6 1336 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms