RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
ITGB1-212ENST00000480226 A0A1B0GTH6 734 aa9.34□□□□□ -0.91
ITGB1-212ENST00000480226 TLR1Q15399 786 aa9.34□□□□□ -0.91
ITGB1-212ENST00000480226 RHBDD1Q8TEB9 315 aa9.34□□□□□ -0.91
ITGB1-212ENST00000480226 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
ITGB1-212ENST00000480226 ALG2Q9H553 416 aa9.34□□□□□ -0.91
ITGB1-212ENST00000480226 MBIPQ9NS73 344 aa9.34□□□□□ -0.91
ITGB1-212ENST00000480226 GPR25O00155 361 aa9.33□□□□□ -0.92
ITGB1-212ENST00000480226 LZTS3O60299 673 aaPredicted RBP9.33□□□□□ -0.92
ITGB1-212ENST00000480226 STAU1O95793 577 aaKnown RBP9.33□□□□□ -0.92
ITGB1-212ENST00000480226 INHAP05111 366 aa9.33□□□□□ -0.92
ITGB1-212ENST00000480226 GDF10P55107 478 aa9.33□□□□□ -0.92
ITGB1-212ENST00000480226 C4orf17Q53FE4 359 aa9.33□□□□□ -0.92
ITGB1-212ENST00000480226 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
ITGB1-212ENST00000480226 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
ITGB1-212ENST00000480226 SKIP12755 728 aa9.32□□□□□ -0.92
ITGB1-212ENST00000480226 EML3Q32P44 896 aa9.32□□□□□ -0.92
ITGB1-212ENST00000480226 NFATC2IPQ8NCF5 419 aa9.32□□□□□ -0.92
ITGB1-212ENST00000480226 WHAMMQ8TF30 809 aa9.32□□□□□ -0.92
ITGB1-212ENST00000480226 PIK3CDO00329 1044 aa9.31□□□□□ -0.92
ITGB1-212ENST00000480226 CSB-PGBD3P0DP91 1061 aa9.31□□□□□ -0.92
ITGB1-212ENST00000480226 SCNN1DP51172 638 aa9.31□□□□□ -0.92
ITGB1-212ENST00000480226 PGBD3Q8N328 593 aa9.31□□□□□ -0.92
ITGB1-212ENST00000480226 GPAMQ9HCL2 828 aa9.31□□□□□ -0.92
ITGB1-212ENST00000480226 NOD1Q9Y239 953 aa9.31□□□□□ -0.92
ITGB1-212ENST00000480226 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
ITGB1-212ENST00000480226 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
ITGB1-212ENST00000480226 NSFL1CQ9UNZ2 370 aaKnown RBP9.3□□□□□ -0.92
ITGB1-212ENST00000480226 IGF1RP08069 1367 aa9.29□□□□□ -0.92
ITGB1-212ENST00000480226 ARHGEF15O94989 841 aa9.29□□□□□ -0.92
ITGB1-212ENST00000480226 SMTNP53814 917 aa9.29□□□□□ -0.92
ITGB1-212ENST00000480226 KCNMA1Q12791 1236 aa9.29□□□□□ -0.92
ITGB1-212ENST00000480226 LYPD4Q6UWN0 246 aa9.29□□□□□ -0.92
ITGB1-212ENST00000480226 RNF225M0QZC1 329 aaPredicted RBP9.28□□□□□ -0.92
ITGB1-212ENST00000480226 MX2P20592 715 aa9.28□□□□□ -0.92
ITGB1-212ENST00000480226 MSX1P28360 303 aa9.28□□□□□ -0.92
ITGB1-212ENST00000480226 CFHR5Q9BXR6 569 aa9.28□□□□□ -0.92
ITGB1-212ENST00000480226 ENAMQ9NRM1 1142 aa9.28□□□□□ -0.92
ITGB1-212ENST00000480226 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
ITGB1-212ENST00000480226 PHF24Q9UPV7 400 aa9.28□□□□□ -0.92
ITGB1-212ENST00000480226 PCDHGA11Q9Y5H2 935 aa9.28□□□□□ -0.92
ITGB1-212ENST00000480226 CELA2BP08218 269 aaPredicted RBP9.27□□□□□ -0.93
ITGB1-212ENST00000480226 PLA2G4AP47712 749 aa9.27□□□□□ -0.93
ITGB1-212ENST00000480226 MARSP56192 900 aaKnown RBP9.27□□□□□ -0.93
ITGB1-212ENST00000480226 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
ITGB1-212ENST00000480226 SLC4A9Q96Q91 983 aa9.27□□□□□ -0.93
ITGB1-212ENST00000480226 NIFKQ9BYG3 293 aaKnown RBP9.27□□□□□ -0.93
ITGB1-212ENST00000480226 RUBCNLQ9H714 662 aa9.27□□□□□ -0.93
ITGB1-212ENST00000480226 TMEM229AB2RXF0 380 aa9.26□□□□□ -0.93
ITGB1-212ENST00000480226 BACH1O14867 736 aa9.26□□□□□ -0.93
ITGB1-212ENST00000480226 GTF2IP78347 998 aa9.26□□□□□ -0.93
ITGB1-212ENST00000480226 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
ITGB1-212ENST00000480226 A6NJY4 79 aa9.25□□□□□ -0.93
ITGB1-212ENST00000480226 POM121CA8CG34 1229 aa9.25□□□□□ -0.93
ITGB1-212ENST00000480226 CDK2AP1O14519 115 aa9.25□□□□□ -0.93
ITGB1-212ENST00000480226 NCOA4Q13772 614 aa9.25□□□□□ -0.93
ITGB1-212ENST00000480226 C1orf216Q8TAB5 229 aa9.25□□□□□ -0.93
ITGB1-212ENST00000480226 USP17L5A8MUK1 530 aa9.24□□□□□ -0.93
ITGB1-212ENST00000480226 THBS1P07996 1170 aa9.24□□□□□ -0.93
ITGB1-212ENST00000480226 MAP2K3P46734 347 aa9.24□□□□□ -0.93
ITGB1-212ENST00000480226 PSME1Q06323 249 aa9.24□□□□□ -0.93
ITGB1-212ENST00000480226 MTFR1Q15390 333 aa9.24□□□□□ -0.93
ITGB1-212ENST00000480226 HDGFL1Q5TGJ6 251 aa9.24□□□□□ -0.93
ITGB1-212ENST00000480226 AIDAQ96BJ3 306 aa9.24□□□□□ -0.93
ITGB1-212ENST00000480226 CRISPLD1Q9H336 500 aa9.24□□□□□ -0.93
ITGB1-212ENST00000480226 BCRP11274 1271 aa9.23□□□□□ -0.93
ITGB1-212ENST00000480226 TRIM50Q86XT4 487 aa9.23□□□□□ -0.93
ITGB1-212ENST00000480226 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
ITGB1-212ENST00000480226 SCARF2Q96GP6 870 aaPredicted RBP9.23□□□□□ -0.93
ITGB1-212ENST00000480226 ADAMTS19Q8TE59 1207 aa9.22□□□□□ -0.93
ITGB1-212ENST00000480226 ACDQ96AP0 544 aa9.22□□□□□ -0.93
ITGB1-212ENST00000480226 ATXN7L1Q9ULK2 861 aaPredicted RBP9.22□□□□□ -0.93
ITGB1-212ENST00000480226 RASSF7Q02833 373 aa9.21□□□□□ -0.94
ITGB1-212ENST00000480226 UBAP2LQ14157 1087 aaKnown RBP9.21□□□□□ -0.94
ITGB1-212ENST00000480226 NBPF1Q3BBV0 1214 aa9.21□□□□□ -0.94
ITGB1-212ENST00000480226 FIGNL1Q6PIW4 674 aa9.21□□□□□ -0.94
ITGB1-212ENST00000480226 PLEKHM2Q8IWE5 1019 aa9.21□□□□□ -0.94
ITGB1-212ENST00000480226 TMEM151AQ8N4L1 468 aa9.21□□□□□ -0.94
ITGB1-212ENST00000480226 LRRC4BQ9NT99 713 aa9.21□□□□□ -0.94
ITGB1-212ENST00000480226 CABP1Q9NZU7 370 aa9.21□□□□□ -0.94
ITGB1-212ENST00000480226 ATP1A2P50993 1020 aa9.2□□□□□ -0.94
ITGB1-212ENST00000480226 NLRP8Q86W28 1048 aa9.2□□□□□ -0.94
ITGB1-212ENST00000480226 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.2□□□□□ -0.94
ITGB1-212ENST00000480226 NEDD1Q8NHV4 660 aa9.2□□□□□ -0.94
ITGB1-212ENST00000480226 IQSEC3Q9UPP2 1182 aaPredicted RBP9.2□□□□□ -0.94
ITGB1-212ENST00000480226 ATP9BO43861 1147 aa9.19□□□□□ -0.94
ITGB1-212ENST00000480226 GDF11O95390 407 aa9.19□□□□□ -0.94
ITGB1-212ENST00000480226 TATP17735 454 aaPredicted RBP9.19□□□□□ -0.94
ITGB1-212ENST00000480226 GSK3AP49840 483 aa9.19□□□□□ -0.94
ITGB1-212ENST00000480226 PROSER2Q86WR7 435 aaPredicted RBP9.19□□□□□ -0.94
ITGB1-212ENST00000480226 CLUAP1Q96AJ1 413 aa9.19□□□□□ -0.94
ITGB1-212ENST00000480226 OXCT2Q9BYC2 517 aaPredicted RBP9.19□□□□□ -0.94
ITGB1-212ENST00000480226 ZNF358Q9NW07 568 aa9.19□□□□□ -0.94
ITGB1-212ENST00000480226 ZDHHC3Q9NYG2 299 aa9.19□□□□□ -0.94
ITGB1-212ENST00000480226 USP17L3A6NCW0 530 aa9.18□□□□□ -0.94
ITGB1-212ENST00000480226 USP17L4A6NCW7 530 aa9.18□□□□□ -0.94
ITGB1-212ENST00000480226 ATP4AP20648 1035 aa9.18□□□□□ -0.94
ITGB1-212ENST00000480226 IRS1P35568 1242 aa9.18□□□□□ -0.94
ITGB1-212ENST00000480226 ARSJQ5FYB0 599 aaPredicted RBP9.18□□□□□ -0.94
ITGB1-212ENST00000480226 KANK3Q6NY19 840 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms