RNA–Protein interactions for RNA: ENST00000479815.5

HMGN2-208, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-208ENST00000479815 CALD1Q05682 793 aaKnown RBP11.36□□□□□ -0.59
HMGN2-208ENST00000479815 SLFN5Q08AF3 891 aa11.36□□□□□ -0.59
HMGN2-208ENST00000479815 LARP1Q6PKG0 1096 aaKnown RBP11.36□□□□□ -0.59
HMGN2-208ENST00000479815 CEMIPQ8WUJ3 1361 aa11.36□□□□□ -0.59
HMGN2-208ENST00000479815 MAP3K5Q99683 1374 aa11.36□□□□□ -0.59
HMGN2-208ENST00000479815 BCL9LQ86UU0 1499 aa11.36□□□□□ -0.59
HMGN2-208ENST00000479815 ADAMTS2O95450 1211 aa11.35□□□□□ -0.59
HMGN2-208ENST00000479815 FKBP8Q14318 412 aa11.35□□□□□ -0.59
HMGN2-208ENST00000479815 PLEKHO1Q53GL0 409 aaPredicted RBP11.35□□□□□ -0.59
HMGN2-208ENST00000479815 DUSP27Q5VZP5 1158 aa11.35□□□□□ -0.59
HMGN2-208ENST00000479815 TOM1L2Q6ZVM7 507 aa11.35□□□□□ -0.59
HMGN2-208ENST00000479815 RAPGEF4Q8WZA2 1011 aa11.35□□□□□ -0.59
HMGN2-208ENST00000479815 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
HMGN2-208ENST00000479815 ZNF853P0CG23 659 aa11.34□□□□□ -0.59
HMGN2-208ENST00000479815 TATP17735 454 aaPredicted RBP11.34□□□□□ -0.59
HMGN2-208ENST00000479815 SGIP1Q9BQI5 828 aa11.34□□□□□ -0.59
HMGN2-208ENST00000479815 THRAP3Q9Y2W1 955 aaKnown RBP11.34□□□□□ -0.59
HMGN2-208ENST00000479815 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
HMGN2-208ENST00000479815 MRC1P22897 1456 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 SHANK3Q9BYB0 1731 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 NUTM2BA6NNL0 878 aaPredicted RBP11.33□□□□□ -0.6
HMGN2-208ENST00000479815 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 NUTM2EB1AL46 878 aaPredicted RBP11.33□□□□□ -0.6
HMGN2-208ENST00000479815 SEC24BO95487 1268 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 IL2RBP14784 551 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 EVA1CP58658 441 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 NEUROD2Q15784 382 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 AKAP4Q5JQC9 854 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 UNC5CLQ8IV45 518 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 NUTM2AQ8IVF1 878 aaPredicted RBP11.33□□□□□ -0.6
HMGN2-208ENST00000479815 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
HMGN2-208ENST00000479815 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 SPATA31A1Q5TZJ5 1347 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 SPATA31A5Q5VU36 1347 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 SPATA31A7Q8IWB4 1347 aa11.33□□□□□ -0.6
HMGN2-208ENST00000479815 VPS72Q15906 364 aa11.32□□□□□ -0.6
HMGN2-208ENST00000479815 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
HMGN2-208ENST00000479815 IFNL1Q8IU54 200 aa11.32□□□□□ -0.6
HMGN2-208ENST00000479815 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
HMGN2-208ENST00000479815 MYH16Q9H6N6 1097 aa11.32□□□□□ -0.6
HMGN2-208ENST00000479815 STRN4Q9NRL3 753 aa11.32□□□□□ -0.6
HMGN2-208ENST00000479815 SPG7Q9UQ90 795 aa11.32□□□□□ -0.6
HMGN2-208ENST00000479815 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
HMGN2-208ENST00000479815 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
HMGN2-208ENST00000479815 BABAM1Q9NWV8 329 aa11.31□□□□□ -0.6
HMGN2-208ENST00000479815 TNS2Q63HR2 1409 aa11.31□□□□□ -0.6
HMGN2-208ENST00000479815 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
HMGN2-208ENST00000479815 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
HMGN2-208ENST00000479815 KDM6AO15550 1401 aaPredicted RBP11.3□□□□□ -0.6
HMGN2-208ENST00000479815 ATRNO75882 1429 aa11.3□□□□□ -0.6
HMGN2-208ENST00000479815 CT47B1P0C2W7 299 aaPredicted RBP11.3□□□□□ -0.6
HMGN2-208ENST00000479815 GNAI1P63096 354 aa11.3□□□□□ -0.6
HMGN2-208ENST00000479815 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
HMGN2-208ENST00000479815 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
HMGN2-208ENST00000479815 FANCIQ9NVI1 1328 aa11.3□□□□□ -0.6
HMGN2-208ENST00000479815 SIPA1L3O60292 1781 aaPredicted RBP11.29□□□□□ -0.6
HMGN2-208ENST00000479815 CHL1O00533 1208 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 CYP27B1O15528 508 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 HSP90AB1P08238 724 aaKnown RBP11.29□□□□□ -0.6
HMGN2-208ENST00000479815 PHKG2P15735 406 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 NKX1-1Q15270 411 aaPredicted RBP11.29□□□□□ -0.6
HMGN2-208ENST00000479815 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 IFNL2Q8IZJ0 200 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 IL17REQ8NFR9 667 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 FAM212AQ96EL1 285 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 NGLY1Q96IV0 654 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 VIRMAQ69YN4 1812 aaKnown RBP11.29□□□□□ -0.6
HMGN2-208ENST00000479815 THSD7AQ9UPZ6 1657 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
HMGN2-208ENST00000479815 IER5LQ5T953 404 aa11.28□□□□□ -0.6
HMGN2-208ENST00000479815 MCM10Q7L590 875 aa11.28□□□□□ -0.6
HMGN2-208ENST00000479815 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
HMGN2-208ENST00000479815 THUMPD2Q9BTF0 503 aaKnown RBP11.28□□□□□ -0.6
HMGN2-208ENST00000479815 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.61
HMGN2-208ENST00000479815 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.61
HMGN2-208ENST00000479815 DCTN1Q14203 1278 aa11.27□□□□□ -0.61
HMGN2-208ENST00000479815 DCAF5Q96JK2 942 aa11.27□□□□□ -0.61
HMGN2-208ENST00000479815 GLI3P10071 1580 aa11.27□□□□□ -0.61
HMGN2-208ENST00000479815 AFF2P51816 1311 aa11.27□□□□□ -0.61
HMGN2-208ENST00000479815 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
HMGN2-208ENST00000479815 MBIPQ9NS73 344 aa11.26□□□□□ -0.61
HMGN2-208ENST00000479815 USP21Q9UK80 565 aa11.26□□□□□ -0.61
HMGN2-208ENST00000479815 SOS1Q07889 1333 aaPredicted RBP11.26□□□□□ -0.61
HMGN2-208ENST00000479815 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
HMGN2-208ENST00000479815 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
HMGN2-208ENST00000479815 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
HMGN2-208ENST00000479815 ONECUT3O60422 494 aaPredicted RBP11.24□□□□□ -0.61
HMGN2-208ENST00000479815 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
HMGN2-208ENST00000479815 MPRIPQ6WCQ1 1025 aa11.24□□□□□ -0.61
HMGN2-208ENST00000479815 TSR2Q969E8 191 aaKnown RBP11.24□□□□□ -0.61
HMGN2-208ENST00000479815 LGR6Q9HBX8 967 aa11.24□□□□□ -0.61
HMGN2-208ENST00000479815 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
HMGN2-208ENST00000479815 TRPC5Q9UL62 973 aaPredicted RBP11.24□□□□□ -0.61
HMGN2-208ENST00000479815 BCL9O00512 1426 aa11.24□□□□□ -0.61
HMGN2-208ENST00000479815 TOGARAM1Q9Y4F4 1720 aa11.23□□□□□ -0.61
HMGN2-208ENST00000479815 ERVV-2B6SEH9 535 aa11.23□□□□□ -0.61
HMGN2-208ENST00000479815 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms