RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 EXOC5O00471 708 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 USP21Q9UK80 565 aa14.42□□□□□ -0.1
APTX-223ENST00000479656 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
APTX-223ENST00000479656 NKX1-1Q15270 411 aaPredicted RBP14.41□□□□□ -0.1
APTX-223ENST00000479656 ERICH6BQ5W0A0 696 aa14.41□□□□□ -0.1
APTX-223ENST00000479656 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
APTX-223ENST00000479656 CABP4P57796 275 aa14.4□□□□□ -0.1
APTX-223ENST00000479656 EIF4A1P60842 406 aaKnown RBP14.4□□□□□ -0.1
APTX-223ENST00000479656 VPS72Q15906 364 aa14.4□□□□□ -0.1
APTX-223ENST00000479656 ADAMTS7Q9UKP4 1686 aa14.4□□□□□ -0.1
APTX-223ENST00000479656 VIRMAQ69YN4 1812 aaKnown RBP14.4□□□□□ -0.1
APTX-223ENST00000479656 MRPL50Q8N5N7 158 aaKnown RBP14.4□□□□□ -0.1
APTX-223ENST00000479656 EXOC6Q8TAG9 804 aa14.4□□□□□ -0.1
APTX-223ENST00000479656 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.1
APTX-223ENST00000479656 SCN11AQ9UI33 1791 aa14.39□□□□□ -0.11
APTX-223ENST00000479656 CRBNQ96SW2 442 aa14.39□□□□□ -0.11
APTX-223ENST00000479656 CDCA7Q9BWT1 371 aaPredicted RBP14.39□□□□□ -0.11
APTX-223ENST00000479656 TNNQ9UQP3 1299 aa14.39□□□□□ -0.11
APTX-223ENST00000479656 SLC39A6Q13433 755 aa14.38□□□□□ -0.11
APTX-223ENST00000479656 BARGINQ6ZT62 677 aa14.38□□□□□ -0.11
APTX-223ENST00000479656 SHANK3Q9BYB0 1731 aa14.38□□□□□ -0.11
APTX-223ENST00000479656 ZKSCAN2Q63HK3 967 aa14.38□□□□□ -0.11
APTX-223ENST00000479656 AFF2P51816 1311 aa14.37□□□□□ -0.11
APTX-223ENST00000479656 ERVV-2B6SEH9 535 aa14.37□□□□□ -0.11
APTX-223ENST00000479656 BRPF1P55201 1214 aaPredicted RBP14.37□□□□□ -0.11
APTX-223ENST00000479656 PDE3AQ14432 1141 aa14.37□□□□□ -0.11
APTX-223ENST00000479656 DDB1Q16531 1140 aa14.37□□□□□ -0.11
APTX-223ENST00000479656 FAM98CQ17RN3 349 aaKnown RBP14.37□□□□□ -0.11
APTX-223ENST00000479656 PANK1Q8TE04 598 aa14.37□□□□□ -0.11
APTX-223ENST00000479656 CLUAP1Q96AJ1 413 aa14.37□□□□□ -0.11
APTX-223ENST00000479656 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
APTX-223ENST00000479656 NECTIN2Q92692 538 aa14.36□□□□□ -0.11
APTX-223ENST00000479656 PPP4R2Q9NY27 417 aa14.36□□□□□ -0.11
APTX-223ENST00000479656 SIPA1L3O60292 1781 aaPredicted RBP14.36□□□□□ -0.11
APTX-223ENST00000479656 KDM3BQ7LBC6 1761 aa14.36□□□□□ -0.11
APTX-223ENST00000479656 KIF16BQ96L93 1317 aa14.35□□□□□ -0.11
APTX-223ENST00000479656 IPO8O15397 1037 aaKnown RBP14.35□□□□□ -0.11
APTX-223ENST00000479656 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
APTX-223ENST00000479656 SOS1Q07889 1333 aaPredicted RBP14.34□□□□□ -0.11
APTX-223ENST00000479656 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
APTX-223ENST00000479656 RLBP1P12271 317 aa14.34□□□□□ -0.11
APTX-223ENST00000479656 TRIM27P14373 513 aa14.34□□□□□ -0.11
APTX-223ENST00000479656 EIF2S2P20042 333 aaKnown RBP14.34□□□□□ -0.11
APTX-223ENST00000479656 WNK3Q9BYP7 1800 aa14.34□□□□□ -0.11
APTX-223ENST00000479656 MRC1P22897 1456 aa14.34□□□□□ -0.11
APTX-223ENST00000479656 GIGYF1O75420 1035 aaPredicted RBP14.33□□□□□ -0.11
APTX-223ENST00000479656 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.11
APTX-223ENST00000479656 TNS2Q63HR2 1409 aa14.33□□□□□ -0.11
APTX-223ENST00000479656 DZIP1LQ8IYY4 767 aaKnown RBP14.33□□□□□ -0.11
APTX-223ENST00000479656 COG6Q9Y2V7 657 aa14.33□□□□□ -0.11
APTX-223ENST00000479656 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.12
APTX-223ENST00000479656 TTC5Q8N0Z6 440 aa14.33□□□□□ -0.12
APTX-223ENST00000479656 MARCH10Q8NA82 808 aaPredicted RBP14.33□□□□□ -0.12
APTX-223ENST00000479656 GJD4Q96KN9 370 aaPredicted RBP14.33□□□□□ -0.12
APTX-223ENST00000479656 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.12
APTX-223ENST00000479656 HDGFL1Q5TGJ6 251 aa14.32□□□□□ -0.12
APTX-223ENST00000479656 ARHGAP45Q92619 1136 aa14.32□□□□□ -0.12
APTX-223ENST00000479656 ZNF496Q96IT1 587 aaPredicted RBP14.32□□□□□ -0.12
APTX-223ENST00000479656 STK31Q9BXU1 1019 aa14.32□□□□□ -0.12
APTX-223ENST00000479656 TMOD3Q9NYL9 352 aa14.32□□□□□ -0.12
APTX-223ENST00000479656 A0A0G2JS52 829 aa14.31□□□□□ -0.12
APTX-223ENST00000479656 HOXB7P09629 217 aa14.31□□□□□ -0.12
APTX-223ENST00000479656 MS4A1P11836 297 aa14.31□□□□□ -0.12
APTX-223ENST00000479656 MYT1Q01538 1121 aa14.31□□□□□ -0.12
APTX-223ENST00000479656 B4GALNT3Q6L9W6 998 aa14.31□□□□□ -0.12
APTX-223ENST00000479656 FTSJ3Q8IY81 847 aaKnown RBP14.31□□□□□ -0.12
APTX-223ENST00000479656 G2E3Q7L622 706 aa14.31□□□□□ -0.12
APTX-223ENST00000479656 PIGBQ92521 554 aa14.31□□□□□ -0.12
APTX-223ENST00000479656 QTRT2Q9H974 415 aaKnown RBP14.31□□□□□ -0.12
APTX-223ENST00000479656 TRPC5Q9UL62 973 aaPredicted RBP14.31□□□□□ -0.12
APTX-223ENST00000479656 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.3□□□□□ -0.12
APTX-223ENST00000479656 FMNL2Q96PY5 1086 aa14.3□□□□□ -0.12
APTX-223ENST00000479656 TOGARAM1Q9Y4F4 1720 aa14.29□□□□□ -0.12
APTX-223ENST00000479656 PRIM1P49642 420 aaKnown RBP14.29□□□□□ -0.12
APTX-223ENST00000479656 SYTL4Q96C24 671 aaPredicted RBP14.29□□□□□ -0.12
APTX-223ENST00000479656 TMEM57Q8N5G2 664 aa14.29□□□□□ -0.12
APTX-223ENST00000479656 CHMP4AQ9BY43 222 aa14.29□□□□□ -0.12
APTX-223ENST00000479656 API5Q9BZZ5 524 aaKnown RBP14.29□□□□□ -0.12
APTX-223ENST00000479656 PTCD1O75127 700 aaKnown RBP14.28□□□□□ -0.12
APTX-223ENST00000479656 SNRPA1P09661 255 aaKnown RBP14.28□□□□□ -0.12
APTX-223ENST00000479656 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
APTX-223ENST00000479656 FBXO41Q8TF61 875 aa14.28□□□□□ -0.12
APTX-223ENST00000479656 ACSBG1Q96GR2 724 aa14.28□□□□□ -0.12
APTX-223ENST00000479656 CCDC136Q96JN2 1154 aa14.28□□□□□ -0.12
APTX-223ENST00000479656 CHPF2Q9P2E5 772 aa14.28□□□□□ -0.12
APTX-223ENST00000479656 ASAP1Q9ULH1 1129 aa14.28□□□□□ -0.12
APTX-223ENST00000479656 ATRNO75882 1429 aa14.28□□□□□ -0.12
APTX-223ENST00000479656 PHAXQ9H814 394 aaKnown RBP14.27□□□□□ -0.12
APTX-223ENST00000479656 USP16Q9Y5T5 823 aa14.27□□□□□ -0.12
APTX-223ENST00000479656 PTPRCP08575 1304 aa14.27□□□□□ -0.12
APTX-223ENST00000479656 GLI3P10071 1580 aa14.27□□□□□ -0.13
APTX-223ENST00000479656 ANXA1P04083 346 aa14.27□□□□□ -0.13
APTX-223ENST00000479656 ITPRIPQ8IWB1 547 aa14.27□□□□□ -0.13
APTX-223ENST00000479656 ATG3Q9NT62 314 aa14.27□□□□□ -0.13
APTX-223ENST00000479656 ONECUT3O60422 494 aaPredicted RBP14.26□□□□□ -0.13
APTX-223ENST00000479656 FLIIQ13045 1269 aa14.26□□□□□ -0.13
APTX-223ENST00000479656 DBF4Q9UBU7 674 aaPredicted RBP14.26□□□□□ -0.13
APTX-223ENST00000479656 BCL9O00512 1426 aa14.26□□□□□ -0.13
APTX-223ENST00000479656 ITGB4P16144 1822 aa14.25□□□□□ -0.13
APTX-223ENST00000479656 FKBP5Q13451 457 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms