RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 KLHL40Q2TBA0 621 aa30.24■■■□□ 2.43
SYNGAP1-206ENST00000479510 THEMISQ8N1K5 641 aaPredicted RBP30.24■■■□□ 2.43
SYNGAP1-206ENST00000479510 SALL3Q9BXA9 1300 aa30.23■■■□□ 2.43
SYNGAP1-206ENST00000479510 FLIIQ13045 1269 aa30.23■■■□□ 2.43
SYNGAP1-206ENST00000479510 ANO8Q9HCE9 1232 aaPredicted RBP30.23■■■□□ 2.43
SYNGAP1-206ENST00000479510 NWD1Q149M9 1564 aa30.23■■■□□ 2.43
SYNGAP1-206ENST00000479510 RRAGDQ9NQL2 400 aaPredicted RBP30.23■■■□□ 2.43
SYNGAP1-206ENST00000479510 MAP3K5Q99683 1374 aa30.22■■■□□ 2.43
SYNGAP1-206ENST00000479510 RGPD8O14715 1765 aaPredicted RBP30.22■■■□□ 2.43
SYNGAP1-206ENST00000479510 HOXC9P31274 260 aa30.21■■■□□ 2.43
SYNGAP1-206ENST00000479510 ATP8B2P98198 1209 aa30.21■■■□□ 2.43
SYNGAP1-206ENST00000479510 APBB1O00213 710 aa30.21■■■□□ 2.43
SYNGAP1-206ENST00000479510 NLRP6P59044 892 aa30.21■■■□□ 2.43
SYNGAP1-206ENST00000479510 LRRCC1Q9C099 1032 aa30.21■■■□□ 2.43
SYNGAP1-206ENST00000479510 ARXQ96QS3 562 aa30.19■■■□□ 2.42
SYNGAP1-206ENST00000479510 SRCIN1Q9C0H9 1055 aa30.19■■■□□ 2.42
SYNGAP1-206ENST00000479510 MARF1Q9Y4F3 1742 aaKnown RBP30.19■■■□□ 2.42
SYNGAP1-206ENST00000479510 AOX1Q06278 1338 aa30.18■■■□□ 2.42
SYNGAP1-206ENST00000479510 CEBPAP49715 358 aaPredicted RBP30.18■■■□□ 2.42
SYNGAP1-206ENST00000479510 FKBP5Q13451 457 aaPredicted RBP30.18■■■□□ 2.42
SYNGAP1-206ENST00000479510 TAF7Q15545 349 aaPredicted RBP30.18■■■□□ 2.42
SYNGAP1-206ENST00000479510 STAP2Q9UGK3 403 aa30.18■■■□□ 2.42
SYNGAP1-206ENST00000479510 MCM2P49736 904 aa30.17■■■□□ 2.42
SYNGAP1-206ENST00000479510 TUBGCP6Q96RT7 1819 aa30.17■■■□□ 2.42
SYNGAP1-206ENST00000479510 EPB41L2O43491 1005 aaKnown RBP30.15■■■□□ 2.42
SYNGAP1-206ENST00000479510 CHMP4AQ9BY43 222 aa30.15■■■□□ 2.42
SYNGAP1-206ENST00000479510 MX1P20591 662 aa30.15■■■□□ 2.42
SYNGAP1-206ENST00000479510 CLCN1P35523 988 aa30.15■■■□□ 2.42
SYNGAP1-206ENST00000479510 ANAPC15P60006 121 aa30.14■■■□□ 2.42
SYNGAP1-206ENST00000479510 GAS2L3Q86XJ1 694 aa30.14■■■□□ 2.42
SYNGAP1-206ENST00000479510 IL17RAQ96F46 866 aa30.14■■■□□ 2.42
SYNGAP1-206ENST00000479510 IL17REQ8NFR9 667 aa30.13■■■□□ 2.41
SYNGAP1-206ENST00000479510 DDX49Q9Y6V7 483 aaKnown RBP30.13■■■□□ 2.41
SYNGAP1-206ENST00000479510 ESYT1Q9BSJ8 1104 aa30.13■■■□□ 2.41
SYNGAP1-206ENST00000479510 EXOC6BQ9Y2D4 811 aa30.13■■■□□ 2.41
SYNGAP1-206ENST00000479510 MCCP23508 829 aa30.12■■■□□ 2.41
SYNGAP1-206ENST00000479510 PLPPR3Q6T4P5 718 aa30.1■■■□□ 2.41
SYNGAP1-206ENST00000479510 PNMA6EA0A0J9YXQ4 647 aa30.08■■■□□ 2.41
SYNGAP1-206ENST00000479510 FER1L4A9Z1Z3 1794 aa30.08■■■□□ 2.41
SYNGAP1-206ENST00000479510 HOXB7P09629 217 aa30.08■■■□□ 2.41
SYNGAP1-206ENST00000479510 ZNF445P59923 1031 aa30.08■■■□□ 2.41
SYNGAP1-206ENST00000479510 CEMIPQ8WUJ3 1361 aa30.07■■■□□ 2.4
SYNGAP1-206ENST00000479510 RAB11FIP3O75154 756 aa30.07■■■□□ 2.4
SYNGAP1-206ENST00000479510 ABTB2Q8N961 1025 aa30.07■■■□□ 2.4
SYNGAP1-206ENST00000479510 LMBRD1Q9NUN5 540 aa30.07■■■□□ 2.4
SYNGAP1-206ENST00000479510 SSH3Q8TE77 659 aa30.07■■■□□ 2.4
SYNGAP1-206ENST00000479510 USP44Q9H0E7 712 aa30.07■■■□□ 2.4
SYNGAP1-206ENST00000479510 UBTFL1P0CB47 393 aaPredicted RBP30.06■■■□□ 2.4
SYNGAP1-206ENST00000479510 CHMLP26374 656 aa30.06■■■□□ 2.4
SYNGAP1-206ENST00000479510 MCTP1Q6DN14 999 aa30.06■■■□□ 2.4
SYNGAP1-206ENST00000479510 LRRFIP2Q9Y608 721 aaKnown RBP30.06■■■□□ 2.4
SYNGAP1-206ENST00000479510 MED1Q15648 1581 aaPredicted RBP30.06■■■□□ 2.4
SYNGAP1-206ENST00000479510 KCNA6P17658 529 aa30.05■■■□□ 2.4
SYNGAP1-206ENST00000479510 CCDC173Q0VFZ6 552 aa30.03■■■□□ 2.4
SYNGAP1-206ENST00000479510 HDGFL1Q5TGJ6 251 aa30.03■■■□□ 2.4
SYNGAP1-206ENST00000479510 CUL4AQ13619 759 aa30.03■■■□□ 2.4
SYNGAP1-206ENST00000479510 NEK4P51957 841 aa30.02■■■□□ 2.4
SYNGAP1-206ENST00000479510 ZGPATQ8N5A5 531 aaKnown RBP30.02■■■□□ 2.4
SYNGAP1-206ENST00000479510 IP6K1Q92551 441 aa30.02■■■□□ 2.4
SYNGAP1-206ENST00000479510 TRIM44Q96DX7 344 aaPredicted RBP30.02■■■□□ 2.4
SYNGAP1-206ENST00000479510 INTS4Q96HW7 963 aaKnown RBP30.02■■■□□ 2.4
SYNGAP1-206ENST00000479510 PPP1R9BQ96SB3 815 aa30.02■■■□□ 2.4
SYNGAP1-206ENST00000479510 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.02■■■□□ 2.4
SYNGAP1-206ENST00000479510 POLA2Q14181 598 aa30.02■■■□□ 2.4
SYNGAP1-206ENST00000479510 ESPNB1AK53 854 aa30.01■■■□□ 2.39
SYNGAP1-206ENST00000479510 TMX3Q96JJ7 454 aa30■■■□□ 2.39
SYNGAP1-206ENST00000479510 ADGRL3Q9HAR2 1447 aa30■■■□□ 2.39
SYNGAP1-206ENST00000479510 NASPP49321 788 aaPredicted RBP30■■■□□ 2.39
SYNGAP1-206ENST00000479510 ANP32BQ92688 251 aaKnown RBP30■■■□□ 2.39
SYNGAP1-206ENST00000479510 ZDHHC9Q9Y397 364 aa30■■■□□ 2.39
SYNGAP1-206ENST00000479510 PKP1Q13835 747 aa29.99■■■□□ 2.39
SYNGAP1-206ENST00000479510 PHF8Q9UPP1 1060 aa29.99■■■□□ 2.39
SYNGAP1-206ENST00000479510 AK9Q5TCS8 1911 aa29.98■■■□□ 2.39
SYNGAP1-206ENST00000479510 NFAT5O94916 1531 aa29.98■■■□□ 2.39
SYNGAP1-206ENST00000479510 TRIM6-TRIM34B2RNG4 842 aa29.98■■■□□ 2.39
SYNGAP1-206ENST00000479510 NECTIN2Q92692 538 aa29.98■■■□□ 2.39
SYNGAP1-206ENST00000479510 LTN1O94822 1766 aa29.97■■■□□ 2.39
SYNGAP1-206ENST00000479510 PHRF1Q9P1Y6 1649 aaKnown RBP29.97■■■□□ 2.39
SYNGAP1-206ENST00000479510 NUTM2GQ5VZR2 741 aa29.97■■■□□ 2.39
SYNGAP1-206ENST00000479510 RILPL2Q969X0 211 aa29.97■■■□□ 2.39
SYNGAP1-206ENST00000479510 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
SYNGAP1-206ENST00000479510 TSHZ3Q63HK5 1081 aa29.96■■■□□ 2.39
SYNGAP1-206ENST00000479510 ANO2Q9NQ90 1003 aa29.96■■■□□ 2.39
SYNGAP1-206ENST00000479510 KDM3BQ7LBC6 1761 aa29.96■■■□□ 2.39
SYNGAP1-206ENST00000479510 EIF4A1P60842 406 aaKnown RBP29.95■■■□□ 2.39
SYNGAP1-206ENST00000479510 ZSCAN23Q3MJ62 389 aa29.95■■■□□ 2.39
SYNGAP1-206ENST00000479510 LTV1Q96GA3 475 aaPredicted RBP29.95■■■□□ 2.39
SYNGAP1-206ENST00000479510 HSP90AB4PQ58FF6 505 aa29.94■■■□□ 2.38
SYNGAP1-206ENST00000479510 BRD1O95696 1058 aa29.93■■■□□ 2.38
SYNGAP1-206ENST00000479510 CAVIN1Q6NZI2 390 aaKnown RBP29.93■■■□□ 2.38
SYNGAP1-206ENST00000479510 PPP1R42Q7Z4L9 355 aa29.93■■■□□ 2.38
SYNGAP1-206ENST00000479510 KCNH5Q8NCM2 988 aa29.93■■■□□ 2.38
SYNGAP1-206ENST00000479510 KIF1BPQ96EK5 621 aa29.93■■■□□ 2.38
SYNGAP1-206ENST00000479510 LMO7Q8WWI1 1683 aa29.92■■■□□ 2.38
SYNGAP1-206ENST00000479510 MBD3O95983 291 aa29.92■■■□□ 2.38
SYNGAP1-206ENST00000479510 PHAXQ9H814 394 aaKnown RBP29.92■■■□□ 2.38
SYNGAP1-206ENST00000479510 OVOS2A0A0G2JMS6 1433 aa29.91■■■□□ 2.38
SYNGAP1-206ENST00000479510 PRPF40AO75400 957 aaKnown RBP29.91■■■□□ 2.38
SYNGAP1-206ENST00000479510 PALD1Q9ULE6 856 aa29.91■■■□□ 2.38
SYNGAP1-206ENST00000479510 RHPN1Q8TCX5 695 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms