RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 POGKQ9P215 609 aa5.9□□□□□ -1.46
COPS7B-220ENST00000479430 WWC3Q9ULE0 1092 aa5.9□□□□□ -1.46
COPS7B-220ENST00000479430 SHANK3Q9BYB0 1731 aa5.9□□□□□ -1.47
COPS7B-220ENST00000479430 LRRC37A3O60309 1634 aa5.89□□□□□ -1.47
COPS7B-220ENST00000479430 PARP4Q9UKK3 1724 aaKnown RBP5.89□□□□□ -1.47
COPS7B-220ENST00000479430 CLCN1P35523 988 aa5.89□□□□□ -1.47
COPS7B-220ENST00000479430 FAM161AQ3B820 660 aa5.89□□□□□ -1.47
COPS7B-220ENST00000479430 ACIN1Q9UKV3 1341 aaKnown RBP5.89□□□□□ -1.47
COPS7B-220ENST00000479430 ARHGEF10O15013 1369 aa5.89□□□□□ -1.47
COPS7B-220ENST00000479430 ABCC11Q96J66 1382 aa5.89□□□□□ -1.47
COPS7B-220ENST00000479430 PRAG1Q86YV5 1406 aa5.89□□□□□ -1.47
COPS7B-220ENST00000479430 LMO7Q8WWI1 1683 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 KCNQ4P56696 695 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 ZNF526Q8TF50 670 aaPredicted RBP5.88□□□□□ -1.47
COPS7B-220ENST00000479430 NLRP7Q8WX94 980 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 ACSBG1Q96GR2 724 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 BEGAINQ9BUH8 593 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 GPCPD1Q9NPB8 672 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 NINLQ9Y2I6 1382 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 PIK3C2GO75747 1445 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 SSH2Q76I76 1423 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 ITSN1Q15811 1721 aa5.88□□□□□ -1.47
COPS7B-220ENST00000479430 ATMINO43313 823 aaPredicted RBP5.87□□□□□ -1.47
COPS7B-220ENST00000479430 GPR162Q16538 588 aa5.87□□□□□ -1.47
COPS7B-220ENST00000479430 RPGRIP1LQ68CZ1 1315 aa5.87□□□□□ -1.47
COPS7B-220ENST00000479430 SPATA31E1Q6ZUB1 1445 aa5.87□□□□□ -1.47
COPS7B-220ENST00000479430 ARHGEF28Q8N1W1 1705 aaKnown RBP5.87□□□□□ -1.47
COPS7B-220ENST00000479430 BTAF1O14981 1849 aa5.87□□□□□ -1.47
COPS7B-220ENST00000479430 GPRASP1Q5JY77 1395 aa5.86□□□□□ -1.47
COPS7B-220ENST00000479430 GIGYF1O75420 1035 aaPredicted RBP5.86□□□□□ -1.47
COPS7B-220ENST00000479430 TSR1Q2NL82 804 aaKnown RBP5.86□□□□□ -1.47
COPS7B-220ENST00000479430 TCP11L2Q8N4U5 519 aa5.86□□□□□ -1.47
COPS7B-220ENST00000479430 MARCH10Q8NA82 808 aaPredicted RBP5.86□□□□□ -1.47
COPS7B-220ENST00000479430 NLGN2Q8NFZ4 835 aa5.86□□□□□ -1.47
COPS7B-220ENST00000479430 PTCD2Q8WV60 388 aaKnown RBP5.86□□□□□ -1.47
COPS7B-220ENST00000479430 C14orf93Q9H972 538 aaKnown RBP5.86□□□□□ -1.47
COPS7B-220ENST00000479430 COL18A1P39060 1754 aa5.85□□□□□ -1.47
COPS7B-220ENST00000479430 TOPAZ1Q8N9V7 1692 aa5.85□□□□□ -1.47
COPS7B-220ENST00000479430 DHX57Q6P158 1386 aaKnown RBP5.85□□□□□ -1.47
COPS7B-220ENST00000479430 MAP3K7O43318 606 aa5.85□□□□□ -1.47
COPS7B-220ENST00000479430 L3MBTL3Q96JM7 780 aaPredicted RBP5.85□□□□□ -1.47
COPS7B-220ENST00000479430 SNRKQ9NRH2 765 aa5.85□□□□□ -1.47
COPS7B-220ENST00000479430 RGPD3A6NKT7 1758 aaPredicted RBP5.85□□□□□ -1.47
COPS7B-220ENST00000479430 RGPD2P0DJD1 1756 aa5.85□□□□□ -1.47
COPS7B-220ENST00000479430 RGPD4Q7Z3J3 1758 aa5.85□□□□□ -1.47
COPS7B-220ENST00000479430 DLC1Q96QB1 1528 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 TULP4Q9NRJ4 1543 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 WASLO00401 505 aaPredicted RBP5.84□□□□□ -1.47
COPS7B-220ENST00000479430 RAD21O60216 631 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 PLCG2P16885 1265 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 YBX3P16989 372 aaKnown RBP eCLIP5.84□□□□□ -1.47
COPS7B-220ENST00000479430 EVX2Q03828 476 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 SLC15A2Q16348 729 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 TXNRD1Q16881 649 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 ZNF827Q17R98 1081 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 IER5LQ5T953 404 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 ASTLQ6HA08 431 aaPredicted RBP5.84□□□□□ -1.47
COPS7B-220ENST00000479430 NUDT16Q96DE0 195 aaKnown RBP5.84□□□□□ -1.47
COPS7B-220ENST00000479430 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.84□□□□□ -1.47
COPS7B-220ENST00000479430 FAM217BQ9NTX9 383 aaPredicted RBP5.84□□□□□ -1.47
COPS7B-220ENST00000479430 AXIN2Q9Y2T1 843 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 COG6Q9Y2V7 657 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 PCDHGA10Q9Y5H3 936 aa5.84□□□□□ -1.47
COPS7B-220ENST00000479430 COL5A2P05997 1499 aaPredicted RBP5.83□□□□□ -1.48
COPS7B-220ENST00000479430 PARD3Q8TEW0 1356 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 ACEP12821 1306 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 PHF14O94880 888 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 HTRA3P83110 453 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 MYSM1Q5VVJ2 828 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 SMIM5Q71RC9 77 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 ABTB2Q8N961 1025 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 MPHOSPH9Q99550 1183 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 STK32BQ9NY57 414 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 SERPINA10Q9UK55 444 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 ATP7BP35670 1465 aa5.83□□□□□ -1.48
COPS7B-220ENST00000479430 ADGRB1O14514 1584 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 DDB1Q16531 1140 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 MSL1Q68DK7 614 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 TOM1L2Q6ZVM7 507 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 METTL3Q86U44 580 aaKnown RBP5.82□□□□□ -1.48
COPS7B-220ENST00000479430 CCDC97Q96F63 343 aaPredicted RBP5.82□□□□□ -1.48
COPS7B-220ENST00000479430 EPAS1Q99814 870 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 CDK19Q9BWU1 502 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 COLQQ9Y215 455 aaPredicted RBP5.82□□□□□ -1.48
COPS7B-220ENST00000479430 OVOS2A0A0G2JMS6 1433 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 OVOS2A0A0J9YW53 1432 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 OVOS2Q6IE36 1432 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 ANKARQ7Z5J8 1434 aa5.82□□□□□ -1.48
COPS7B-220ENST00000479430 PAPPAQ13219 1627 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 ANKRD30BQ9BXX2 1392 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 GCP02774 474 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 RFC5P40937 340 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 SLAIN1Q8ND83 568 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 TRAIPQ9BWF2 469 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 MTFR1LQ9H019 292 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 LRRC4BQ9NT99 713 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 ZNF330Q9Y3S2 320 aaPredicted RBP5.81□□□□□ -1.48
COPS7B-220ENST00000479430 PIK3C2AO00443 1686 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 NHSQ6T4R5 1651 aa5.81□□□□□ -1.48
COPS7B-220ENST00000479430 LTN1O94822 1766 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms