RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
ITSN1-228ENST00000479424 ADCY9O60503 1353 aa11.89□□□□□ -0.51
ITSN1-228ENST00000479424 KDRP35968 1356 aa11.89□□□□□ -0.51
ITSN1-228ENST00000479424 IGSF1Q8N6C5 1336 aa11.88□□□□□ -0.51
ITSN1-228ENST00000479424 ATP10DQ9P241 1426 aa11.88□□□□□ -0.51
ITSN1-228ENST00000479424 BRCA1P38398 1863 aaKnown RBP11.88□□□□□ -0.51
ITSN1-228ENST00000479424 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
ITSN1-228ENST00000479424 ATP6V1AP38606 617 aa11.87□□□□□ -0.51
ITSN1-228ENST00000479424 TNNT2P45379 298 aaPredicted RBP11.87□□□□□ -0.51
ITSN1-228ENST00000479424 PLEKHG2Q9H7P9 1386 aa11.87□□□□□ -0.51
ITSN1-228ENST00000479424 KDM6AO15550 1401 aaPredicted RBP11.86□□□□□ -0.51
ITSN1-228ENST00000479424 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
ITSN1-228ENST00000479424 GNPATO15228 680 aa11.86□□□□□ -0.51
ITSN1-228ENST00000479424 SCN11AQ9UI33 1791 aa11.86□□□□□ -0.51
ITSN1-228ENST00000479424 POLR3GLQ9BT43 218 aa11.85□□□□□ -0.51
ITSN1-228ENST00000479424 PANK3Q9H999 370 aa11.85□□□□□ -0.51
ITSN1-228ENST00000479424 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
ITSN1-228ENST00000479424 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
ITSN1-228ENST00000479424 ERVV-2B6SEH9 535 aa11.84□□□□□ -0.51
ITSN1-228ENST00000479424 HSPA5P11021 654 aaKnown RBP11.84□□□□□ -0.51
ITSN1-228ENST00000479424 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
ITSN1-228ENST00000479424 TJP1Q07157 1748 aa11.83□□□□□ -0.52
ITSN1-228ENST00000479424 MMP10P09238 476 aa11.83□□□□□ -0.52
ITSN1-228ENST00000479424 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
ITSN1-228ENST00000479424 ADAMTS7Q9UKP4 1686 aa11.83□□□□□ -0.52
ITSN1-228ENST00000479424 ARFGEF1Q9Y6D6 1849 aa11.82□□□□□ -0.52
ITSN1-228ENST00000479424 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
ITSN1-228ENST00000479424 DCAF5Q96JK2 942 aa11.82□□□□□ -0.52
ITSN1-228ENST00000479424 CNTNAP4Q9C0A0 1308 aa11.82□□□□□ -0.52
ITSN1-228ENST00000479424 C10orf71Q711Q0 1435 aa11.81□□□□□ -0.52
ITSN1-228ENST00000479424 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
ITSN1-228ENST00000479424 RC3H1Q5TC82 1133 aaKnown RBP11.81□□□□□ -0.52
ITSN1-228ENST00000479424 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
ITSN1-228ENST00000479424 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
ITSN1-228ENST00000479424 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
ITSN1-228ENST00000479424 RTCBQ9Y3I0 505 aaKnown RBP11.81□□□□□ -0.52
ITSN1-228ENST00000479424 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
ITSN1-228ENST00000479424 HSP90AB1P08238 724 aaKnown RBP11.8□□□□□ -0.52
ITSN1-228ENST00000479424 GYS1P13807 737 aa11.8□□□□□ -0.52
ITSN1-228ENST00000479424 EIF4G2P78344 907 aaKnown RBP eCLIP11.8□□□□□ -0.52
ITSN1-228ENST00000479424 PLEKHO1Q53GL0 409 aaPredicted RBP11.8□□□□□ -0.52
ITSN1-228ENST00000479424 ZNF530Q6P9A1 599 aaPredicted RBP11.8□□□□□ -0.52
ITSN1-228ENST00000479424 ZNF526Q8TF50 670 aaPredicted RBP11.8□□□□□ -0.52
ITSN1-228ENST00000479424 SBF1O95248 1867 aa11.8□□□□□ -0.52
ITSN1-228ENST00000479424 IL13P35225 146 aa11.79□□□□□ -0.52
ITSN1-228ENST00000479424 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
ITSN1-228ENST00000479424 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
ITSN1-228ENST00000479424 A0A0G2JLW4 131 aa11.78□□□□□ -0.52
ITSN1-228ENST00000479424 KIF3CO14782 793 aa11.78□□□□□ -0.52
ITSN1-228ENST00000479424 ADRA2BP18089 450 aa11.78□□□□□ -0.52
ITSN1-228ENST00000479424 CABP4P57796 275 aa11.78□□□□□ -0.52
ITSN1-228ENST00000479424 TGFB2P61812 414 aa11.78□□□□□ -0.52
ITSN1-228ENST00000479424 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
ITSN1-228ENST00000479424 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
ITSN1-228ENST00000479424 PCNTO95613 3336 aa11.78□□□□□ -0.52
ITSN1-228ENST00000479424 DPEP1P16444 411 aa11.77□□□□□ -0.53
ITSN1-228ENST00000479424 KCNA3P22001 575 aa11.77□□□□□ -0.53
ITSN1-228ENST00000479424 RFC4P35249 363 aa11.77□□□□□ -0.53
ITSN1-228ENST00000479424 MTHFSP49914 203 aa11.77□□□□□ -0.53
ITSN1-228ENST00000479424 SULT6B1Q6IMI4 303 aa11.77□□□□□ -0.53
ITSN1-228ENST00000479424 MORC1Q86VD1 984 aa11.77□□□□□ -0.53
ITSN1-228ENST00000479424 PTCD1O75127 700 aaKnown RBP11.76□□□□□ -0.53
ITSN1-228ENST00000479424 HSPA6P17066 643 aa11.76□□□□□ -0.53
ITSN1-228ENST00000479424 CRKLP46109 303 aaKnown RBP11.76□□□□□ -0.53
ITSN1-228ENST00000479424 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
ITSN1-228ENST00000479424 SRP68Q9UHB9 627 aaKnown RBP11.76□□□□□ -0.53
ITSN1-228ENST00000479424 C1orf141Q5JVX7 400 aa11.75□□□□□ -0.53
ITSN1-228ENST00000479424 INTS5Q6P9B9 1019 aaKnown RBP11.75□□□□□ -0.53
ITSN1-228ENST00000479424 BCS1LQ9Y276 419 aa11.75□□□□□ -0.53
ITSN1-228ENST00000479424 MRC1P22897 1456 aa11.75□□□□□ -0.53
ITSN1-228ENST00000479424 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
ITSN1-228ENST00000479424 UBR2Q8IWV8 1755 aa11.74□□□□□ -0.53
ITSN1-228ENST00000479424 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
ITSN1-228ENST00000479424 DDR1Q08345 913 aa11.74□□□□□ -0.53
ITSN1-228ENST00000479424 FKBP8Q14318 412 aa11.74□□□□□ -0.53
ITSN1-228ENST00000479424 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
ITSN1-228ENST00000479424 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
ITSN1-228ENST00000479424 PARP3Q9Y6F1 533 aa11.74□□□□□ -0.53
ITSN1-228ENST00000479424 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
ITSN1-228ENST00000479424 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
ITSN1-228ENST00000479424 DLEC1Q9Y238 1755 aa11.72□□□□□ -0.53
ITSN1-228ENST00000479424 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
ITSN1-228ENST00000479424 FCHSD2O94868 740 aa11.72□□□□□ -0.53
ITSN1-228ENST00000479424 TM4SF1P30408 202 aa11.72□□□□□ -0.53
ITSN1-228ENST00000479424 AKAP4Q5JQC9 854 aa11.72□□□□□ -0.53
ITSN1-228ENST00000479424 ARHGAP27Q6ZUM4 889 aa11.72□□□□□ -0.53
ITSN1-228ENST00000479424 DNAJC10Q8IXB1 793 aa11.72□□□□□ -0.53
ITSN1-228ENST00000479424 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
ITSN1-228ENST00000479424 KNSTRNQ9Y448 316 aa11.72□□□□□ -0.53
ITSN1-228ENST00000479424 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
ITSN1-228ENST00000479424 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
ITSN1-228ENST00000479424 KIF7Q2M1P5 1343 aa11.71□□□□□ -0.53
ITSN1-228ENST00000479424 POLRMTO00411 1230 aaKnown RBP11.71□□□□□ -0.53
ITSN1-228ENST00000479424 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
ITSN1-228ENST00000479424 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
ITSN1-228ENST00000479424 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
ITSN1-228ENST00000479424 HMOX1P09601 288 aa11.7□□□□□ -0.54
ITSN1-228ENST00000479424 CYP19A1P11511 503 aaPredicted RBP11.7□□□□□ -0.54
ITSN1-228ENST00000479424 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
ITSN1-228ENST00000479424 CHRNA5P30532 468 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms