RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 CCDC94Q9BW85 323 aaPredicted RBP16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 MCM5P33992 734 aa16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 GAS2L3Q86XJ1 694 aa16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 HSCBQ8IWL3 235 aa16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 GTPBP4Q9BZE4 634 aaKnown RBP16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 R3HCC1Q9Y3T6 440 aaKnown RBP16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 PARP4Q9UKK3 1724 aaKnown RBP16.35■□□□□ 0.21
CNKSR3-204ENST00000479339 DDIT3P35638 169 aa16.35■□□□□ 0.21
CNKSR3-204ENST00000479339 BAG6P46379 1132 aa16.35■□□□□ 0.21
CNKSR3-204ENST00000479339 RGPD1P0DJD0 1748 aa16.35■□□□□ 0.21
CNKSR3-204ENST00000479339 CARD10Q9BWT7 1032 aa16.35■□□□□ 0.21
CNKSR3-204ENST00000479339 DISP2A7MBM2 1401 aa16.34■□□□□ 0.21
CNKSR3-204ENST00000479339 PDIA4P13667 645 aaKnown RBP16.34■□□□□ 0.21
CNKSR3-204ENST00000479339 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
CNKSR3-204ENST00000479339 NOL7Q9UMY1 257 aaKnown RBP16.34■□□□□ 0.21
CNKSR3-204ENST00000479339 BBXQ8WY36 941 aaPredicted RBP16.33■□□□□ 0.2
CNKSR3-204ENST00000479339 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
CNKSR3-204ENST00000479339 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
CNKSR3-204ENST00000479339 SASS6Q6UVJ0 657 aa16.32■□□□□ 0.2
CNKSR3-204ENST00000479339 ZHX1Q9UKY1 873 aaPredicted RBP16.32■□□□□ 0.2
CNKSR3-204ENST00000479339 TNS1Q9HBL0 1735 aaKnown RBP16.32■□□□□ 0.2
CNKSR3-204ENST00000479339 LETM1O95202 739 aaPredicted RBP16.31■□□□□ 0.2
CNKSR3-204ENST00000479339 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
CNKSR3-204ENST00000479339 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
CNKSR3-204ENST00000479339 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
CNKSR3-204ENST00000479339 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNKSR3-204ENST00000479339 TAF3Q5VWG9 929 aa16.31■□□□□ 0.2
CNKSR3-204ENST00000479339 COG3Q96JB2 828 aa16.31■□□□□ 0.2
CNKSR3-204ENST00000479339 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
CNKSR3-204ENST00000479339 TRIM37O94972 964 aa16.3■□□□□ 0.2
CNKSR3-204ENST00000479339 ZSCAN20P17040 1043 aaPredicted RBP16.3■□□□□ 0.2
CNKSR3-204ENST00000479339 SMC5Q8IY18 1101 aa16.3■□□□□ 0.2
CNKSR3-204ENST00000479339 SNX21Q969T3 373 aa16.3■□□□□ 0.2
CNKSR3-204ENST00000479339 LRRC37A3O60309 1634 aa16.3■□□□□ 0.2
CNKSR3-204ENST00000479339 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
CNKSR3-204ENST00000479339 DDB1Q16531 1140 aa16.29■□□□□ 0.2
CNKSR3-204ENST00000479339 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
CNKSR3-204ENST00000479339 ERBB3P21860 1342 aa16.29■□□□□ 0.2
CNKSR3-204ENST00000479339 GTF2E1P29083 439 aaPredicted RBP16.29■□□□□ 0.2
CNKSR3-204ENST00000479339 RAB3GAP1Q15042 981 aa16.29■□□□□ 0.2
CNKSR3-204ENST00000479339 SPRYD3Q8NCJ5 442 aa16.29■□□□□ 0.2
CNKSR3-204ENST00000479339 LTN1O94822 1766 aa16.29■□□□□ 0.2
CNKSR3-204ENST00000479339 GOLGA6L22H0YM25 854 aa16.28■□□□□ 0.2
CNKSR3-204ENST00000479339 IP6K1Q92551 441 aa16.28■□□□□ 0.2
CNKSR3-204ENST00000479339 TNPO1Q92973 898 aaKnown RBP16.28■□□□□ 0.2
CNKSR3-204ENST00000479339 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
CNKSR3-204ENST00000479339 PEAK1Q9H792 1746 aa16.28■□□□□ 0.2
CNKSR3-204ENST00000479339 E9PSI1 815 aa16.28■□□□□ 0.2
CNKSR3-204ENST00000479339 FYB1O15117 783 aa16.27■□□□□ 0.2
CNKSR3-204ENST00000479339 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.2
CNKSR3-204ENST00000479339 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.2
CNKSR3-204ENST00000479339 BCL9O00512 1426 aa16.26■□□□□ 0.19
CNKSR3-204ENST00000479339 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
CNKSR3-204ENST00000479339 PDLIM2Q96JY6 352 aa16.26■□□□□ 0.19
CNKSR3-204ENST00000479339 CAMKK2Q96RR4 588 aa16.26■□□□□ 0.19
CNKSR3-204ENST00000479339 APBA3O96018 575 aa16.26■□□□□ 0.19
CNKSR3-204ENST00000479339 KLHL40Q2TBA0 621 aa16.26■□□□□ 0.19
CNKSR3-204ENST00000479339 ZKSCAN5Q9Y2L8 839 aa16.26■□□□□ 0.19
CNKSR3-204ENST00000479339 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
CNKSR3-204ENST00000479339 MYOM1P52179 1685 aa16.25■□□□□ 0.19
CNKSR3-204ENST00000479339 ZNF445P59923 1031 aa16.25■□□□□ 0.19
CNKSR3-204ENST00000479339 CLEC17AQ6ZS10 378 aa16.25■□□□□ 0.19
CNKSR3-204ENST00000479339 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
CNKSR3-204ENST00000479339 EZH2Q15910 746 aaKnown RBP16.24■□□□□ 0.19
CNKSR3-204ENST00000479339 MARCH10Q8NA82 808 aaPredicted RBP16.24■□□□□ 0.19
CNKSR3-204ENST00000479339 CARD14Q9BXL6 1004 aa16.24■□□□□ 0.19
CNKSR3-204ENST00000479339 BCL11BQ9C0K0 894 aaPredicted RBP16.24■□□□□ 0.19
CNKSR3-204ENST00000479339 GGNBP2Q9H3C7 697 aa16.24■□□□□ 0.19
CNKSR3-204ENST00000479339 IPO4Q8TEX9 1081 aaKnown RBP16.24■□□□□ 0.19
CNKSR3-204ENST00000479339 NAP1L2Q9ULW6 460 aaPredicted RBP16.24■□□□□ 0.19
CNKSR3-204ENST00000479339 EXOC5O00471 708 aa16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 HOXC9P31274 260 aa16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 RWDD1Q9H446 243 aaPredicted RBP16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 PRDM10Q9NQV6 1147 aa16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 PDZRN3Q9UPQ7 1066 aa16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 TNS2Q63HR2 1409 aa16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 BCAR3O75815 825 aa16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 RBM25P49756 843 aaKnown RBP16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 TAF7LQ5H9L4 462 aa16.23■□□□□ 0.19
CNKSR3-204ENST00000479339 NSD3Q9BZ95 1437 aa16.22■□□□□ 0.19
CNKSR3-204ENST00000479339 AMPHP49418 695 aa16.22■□□□□ 0.19
CNKSR3-204ENST00000479339 IL2RBP14784 551 aa16.21■□□□□ 0.19
CNKSR3-204ENST00000479339 FBLN1P23142 703 aa16.21■□□□□ 0.19
CNKSR3-204ENST00000479339 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.18
CNKSR3-204ENST00000479339 KIF20BQ96Q89 1820 aa16.21■□□□□ 0.18
CNKSR3-204ENST00000479339 FAM208AQ9UK61 1670 aaKnown RBP16.2■□□□□ 0.18
CNKSR3-204ENST00000479339 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.2■□□□□ 0.18
CNKSR3-204ENST00000479339 PANK3Q9H999 370 aa16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 MFAP1P55081 439 aaKnown RBP16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 RRS1Q15050 365 aaKnown RBP16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 MYRIPQ8NFW9 859 aa16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 LTV1Q96GA3 475 aaPredicted RBP16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 RREB1Q92766 1687 aa16.19■□□□□ 0.18
CNKSR3-204ENST00000479339 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
CNKSR3-204ENST00000479339 PPP2R1AP30153 589 aa16.18■□□□□ 0.18
CNKSR3-204ENST00000479339 PRIMPOLQ96LW4 560 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms