RNA–Protein interactions for RNA: ENST00000479294.2

SRRM3-203, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-203ENST00000479294 COL23A1Q86Y22 540 aaPredicted RBP30.37■■■□□ 2.45
SRRM3-203ENST00000479294 LGR6Q9HBX8 967 aa30.37■■■□□ 2.45
SRRM3-203ENST00000479294 RNMTO43148 476 aaKnown RBP30.36■■■□□ 2.45
SRRM3-203ENST00000479294 MSH5O43196 834 aa30.36■■■□□ 2.45
SRRM3-203ENST00000479294 LINC00116Q8NCU8 138 aa30.36■■■□□ 2.45
SRRM3-203ENST00000479294 GAS2L2Q8NHY3 880 aa30.36■■■□□ 2.45
SRRM3-203ENST00000479294 RBM42Q9BTD8 480 aaKnown RBP30.36■■■□□ 2.45
SRRM3-203ENST00000479294 U2AF1L5P0DN76 240 aaPredicted RBP30.35■■■□□ 2.45
SRRM3-203ENST00000479294 U2AF1Q01081 240 aaKnown RBP eCLIP30.35■■■□□ 2.45
SRRM3-203ENST00000479294 RSPH6AQ9H0K4 717 aa30.34■■■□□ 2.45
SRRM3-203ENST00000479294 SLC52A2Q9HAB3 445 aa30.34■■■□□ 2.45
SRRM3-203ENST00000479294 PRKAR2BP31323 418 aa30.33■■■□□ 2.45
SRRM3-203ENST00000479294 SLC4A9Q96Q91 983 aa30.33■■■□□ 2.45
SRRM3-203ENST00000479294 C5P01031 1676 aa30.33■■■□□ 2.45
SRRM3-203ENST00000479294 ARXQ96QS3 562 aa30.32■■■□□ 2.44
SRRM3-203ENST00000479294 QSER1Q2KHR3 1735 aa30.32■■■□□ 2.44
SRRM3-203ENST00000479294 POLD1P28340 1107 aa30.31■■■□□ 2.44
SRRM3-203ENST00000479294 RALBP1Q15311 655 aa30.31■■■□□ 2.44
SRRM3-203ENST00000479294 FCHSD2O94868 740 aa30.3■■■□□ 2.44
SRRM3-203ENST00000479294 GNAT3A8MTJ3 354 aa30.29■■■□□ 2.44
SRRM3-203ENST00000479294 PTCD1O75127 700 aaKnown RBP30.29■■■□□ 2.44
SRRM3-203ENST00000479294 PHACTR3Q96KR7 559 aa30.29■■■□□ 2.44
SRRM3-203ENST00000479294 C4BP0C0L5 1744 aa30.29■■■□□ 2.44
SRRM3-203ENST00000479294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.28■■■□□ 2.44
SRRM3-203ENST00000479294 SSFA2P28290 1259 aa30.28■■■□□ 2.44
SRRM3-203ENST00000479294 MAP3K5Q99683 1374 aa30.28■■■□□ 2.44
SRRM3-203ENST00000479294 GNPATO15228 680 aa30.27■■■□□ 2.44
SRRM3-203ENST00000479294 PHF14O94880 888 aa30.27■■■□□ 2.44
SRRM3-203ENST00000479294 AMIGO3Q86WK7 504 aa30.27■■■□□ 2.44
SRRM3-203ENST00000479294 FHDC1Q9C0D6 1143 aaPredicted RBP30.27■■■□□ 2.44
SRRM3-203ENST00000479294 MRC1P22897 1456 aa30.25■■■□□ 2.43
SRRM3-203ENST00000479294 TAF1LQ8IZX4 1826 aa30.24■■■□□ 2.43
SRRM3-203ENST00000479294 RC3H1Q5TC82 1133 aaKnown RBP30.24■■■□□ 2.43
SRRM3-203ENST00000479294 IL17REQ8NFR9 667 aa30.24■■■□□ 2.43
SRRM3-203ENST00000479294 SYT17Q9BSW7 474 aa30.24■■■□□ 2.43
SRRM3-203ENST00000479294 TUBGCP6Q96RT7 1819 aa30.24■■■□□ 2.43
SRRM3-203ENST00000479294 SMIM5Q71RC9 77 aa30.23■■■□□ 2.43
SRRM3-203ENST00000479294 MSL1Q68DK7 614 aa30.22■■■□□ 2.43
SRRM3-203ENST00000479294 RTCBQ9Y3I0 505 aaKnown RBP30.22■■■□□ 2.43
SRRM3-203ENST00000479294 SCN11AQ9UI33 1791 aa30.22■■■□□ 2.43
SRRM3-203ENST00000479294 CNTNAP4Q9C0A0 1308 aa30.22■■■□□ 2.43
SRRM3-203ENST00000479294 TEFQ10587 303 aa30.21■■■□□ 2.43
SRRM3-203ENST00000479294 SLC39A6Q13433 755 aa30.21■■■□□ 2.43
SRRM3-203ENST00000479294 DCAF8L1A6NGE4 600 aa30.19■■■□□ 2.42
SRRM3-203ENST00000479294 ZNF831Q5JPB2 1677 aa30.18■■■□□ 2.42
SRRM3-203ENST00000479294 ADAMTS7Q9UKP4 1686 aa30.18■■■□□ 2.42
SRRM3-203ENST00000479294 TRAPPC3LQ5T215 181 aa30.18■■■□□ 2.42
SRRM3-203ENST00000479294 RPS6KA4O75676 772 aa30.17■■■□□ 2.42
SRRM3-203ENST00000479294 NEFMP07197 916 aa30.16■■■□□ 2.42
SRRM3-203ENST00000479294 ADRA2BP18089 450 aa30.16■■■□□ 2.42
SRRM3-203ENST00000479294 MYBBP1AQ9BQG0 1328 aaKnown RBP30.16■■■□□ 2.42
SRRM3-203ENST00000479294 CEMIPQ8WUJ3 1361 aa30.15■■■□□ 2.42
SRRM3-203ENST00000479294 TTC5Q8N0Z6 440 aa30.15■■■□□ 2.42
SRRM3-203ENST00000479294 RTF1Q92541 710 aaKnown RBP30.15■■■□□ 2.42
SRRM3-203ENST00000479294 CRKLP46109 303 aaKnown RBP30.14■■■□□ 2.42
SRRM3-203ENST00000479294 DNAJC10Q8IXB1 793 aa30.14■■■□□ 2.42
SRRM3-203ENST00000479294 KLHL34Q8N239 644 aa30.14■■■□□ 2.42
SRRM3-203ENST00000479294 VSIG10Q8N0Z9 540 aa30.13■■■□□ 2.41
SRRM3-203ENST00000479294 PNNQ9H307 717 aaKnown RBP30.13■■■□□ 2.41
SRRM3-203ENST00000479294 COL24A1Q17RW2 1714 aa30.13■■■□□ 2.41
SRRM3-203ENST00000479294 UBR3Q6ZT12 1888 aa30.12■■■□□ 2.41
SRRM3-203ENST00000479294 HTATSF1O43719 755 aaKnown RBP30.12■■■□□ 2.41
SRRM3-203ENST00000479294 ARHGEF1Q92888 912 aaKnown RBP30.12■■■□□ 2.41
SRRM3-203ENST00000479294 ZNF790Q6PG37 636 aa30.11■■■□□ 2.41
SRRM3-203ENST00000479294 PLEKHF1Q96S99 279 aa30.1■■■□□ 2.41
SRRM3-203ENST00000479294 RFC4P35249 363 aa30.09■■■□□ 2.41
SRRM3-203ENST00000479294 INTS5Q6P9B9 1019 aaKnown RBP30.09■■■□□ 2.41
SRRM3-203ENST00000479294 KCPQ6ZWJ8 1503 aa30.09■■■□□ 2.41
SRRM3-203ENST00000479294 MCM10Q7L590 875 aa30.09■■■□□ 2.41
SRRM3-203ENST00000479294 BTBD11A6QL63 1104 aa30.08■■■□□ 2.41
SRRM3-203ENST00000479294 CYP19A1P11511 503 aaPredicted RBP30.08■■■□□ 2.41
SRRM3-203ENST00000479294 CCDC87Q9NVE4 849 aa30.08■■■□□ 2.41
SRRM3-203ENST00000479294 COL5A3P25940 1745 aaPredicted RBP30.07■■■□□ 2.4
SRRM3-203ENST00000479294 NLGN1Q8N2Q7 840 aa30.06■■■□□ 2.4
SRRM3-203ENST00000479294 ZNF496Q96IT1 587 aaPredicted RBP30.06■■■□□ 2.4
SRRM3-203ENST00000479294 PRKRIP1Q9H875 184 aaPredicted RBP30.06■■■□□ 2.4
SRRM3-203ENST00000479294 MAPK8IP3Q9UPT6 1336 aa30.05■■■□□ 2.4
SRRM3-203ENST00000479294 DCTN1Q14203 1278 aa30.05■■■□□ 2.4
SRRM3-203ENST00000479294 CICQ96RK0 1608 aaPredicted RBP30.04■■■□□ 2.4
SRRM3-203ENST00000479294 TJP1Q07157 1748 aa30.03■■■□□ 2.4
SRRM3-203ENST00000479294 STARD3NLO95772 234 aa30.03■■■□□ 2.4
SRRM3-203ENST00000479294 NFE2L2Q16236 605 aa30.03■■■□□ 2.4
SRRM3-203ENST00000479294 FMNL2Q96PY5 1086 aa30.03■■■□□ 2.4
SRRM3-203ENST00000479294 TEX13AQ9BXU3 409 aaPredicted RBP30.03■■■□□ 2.4
SRRM3-203ENST00000479294 CD2APQ9Y5K6 639 aa30.03■■■□□ 2.4
SRRM3-203ENST00000479294 HEG1Q9ULI3 1381 aa30.03■■■□□ 2.4
SRRM3-203ENST00000479294 GYS1P13807 737 aa30.02■■■□□ 2.4
SRRM3-203ENST00000479294 NLGN2Q8NFZ4 835 aa30.02■■■□□ 2.4
SRRM3-203ENST00000479294 MMP10P09238 476 aa30.01■■■□□ 2.39
SRRM3-203ENST00000479294 SOS1Q07889 1333 aaPredicted RBP30■■■□□ 2.39
SRRM3-203ENST00000479294 KCNQ3O43525 872 aa30■■■□□ 2.39
SRRM3-203ENST00000479294 ZNF316A6NFI3 1004 aaPredicted RBP29.99■■■□□ 2.39
SRRM3-203ENST00000479294 ZBTB1Q9Y2K1 713 aa29.99■■■□□ 2.39
SRRM3-203ENST00000479294 USP42Q9H9J4 1324 aaKnown RBP29.98■■■□□ 2.39
SRRM3-203ENST00000479294 MYH14Q7Z406 1995 aaKnown RBP29.98■■■□□ 2.39
SRRM3-203ENST00000479294 TAF7Q15545 349 aaPredicted RBP29.98■■■□□ 2.39
SRRM3-203ENST00000479294 VIRMAQ69YN4 1812 aaKnown RBP29.97■■■□□ 2.39
SRRM3-203ENST00000479294 SRP68Q9UHB9 627 aaKnown RBP29.97■■■□□ 2.39
SRRM3-203ENST00000479294 WDR43Q15061 677 aaKnown RBP eCLIP29.96■■■□□ 2.39
SRRM3-203ENST00000479294 GPR162Q16538 588 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms