RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 IFFO2Q5TF58 517 aa15.27■□□□□ 0.04
HDLBP-237ENST00000479169 IFNL2Q8IZJ0 200 aa15.27■□□□□ 0.04
HDLBP-237ENST00000479169 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
HDLBP-237ENST00000479169 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.045e-11■□□□□ 8.6
HDLBP-237ENST00000479169 MYH14Q7Z406 1995 aaKnown RBP15.27■□□□□ 0.03
HDLBP-237ENST00000479169 MMP10P09238 476 aa15.26■□□□□ 0.03
HDLBP-237ENST00000479169 HSPA6P17066 643 aa15.26■□□□□ 0.03
HDLBP-237ENST00000479169 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
HDLBP-237ENST00000479169 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
HDLBP-237ENST00000479169 PXDNLA1KZ92 1463 aa15.26■□□□□ 0.03
HDLBP-237ENST00000479169 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
HDLBP-237ENST00000479169 KDRP35968 1356 aa15.25■□□□□ 0.03
HDLBP-237ENST00000479169 BRCA1P38398 1863 aaKnown RBP15.25■□□□□ 0.03
HDLBP-237ENST00000479169 SLC4A9Q96Q91 983 aa15.25■□□□□ 0.03
HDLBP-237ENST00000479169 POLR3GLQ9BT43 218 aa15.24■□□□□ 0.03
HDLBP-237ENST00000479169 ZNF831Q5JPB2 1677 aa15.24■□□□□ 0.03
HDLBP-237ENST00000479169 KIF3CO14782 793 aa15.23■□□□□ 0.03
HDLBP-237ENST00000479169 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
HDLBP-237ENST00000479169 RTCBQ9Y3I0 505 aaKnown RBP15.22■□□□□ 0.03
HDLBP-237ENST00000479169 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
HDLBP-237ENST00000479169 KDM6AO15550 1401 aaPredicted RBP15.21■□□□□ 0.03
HDLBP-237ENST00000479169 A0A0G2JLW4 131 aa15.21■□□□□ 0.03
HDLBP-237ENST00000479169 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
HDLBP-237ENST00000479169 BCS1LQ9Y276 419 aa15.21■□□□□ 0.03
HDLBP-237ENST00000479169 ARHGEF1Q92888 912 aaKnown RBP15.2■□□□□ 0.02
HDLBP-237ENST00000479169 ARFGEF1Q9Y6D6 1849 aa15.2■□□□□ 0.02
HDLBP-237ENST00000479169 ERVV-2B6SEH9 535 aa15.19■□□□□ 0.02
HDLBP-237ENST00000479169 GYS1P13807 737 aa15.19■□□□□ 0.02
HDLBP-237ENST00000479169 NLGN1Q8N2Q7 840 aa15.19■□□□□ 0.02
HDLBP-237ENST00000479169 CNTNAP4Q9C0A0 1308 aa15.18■□□□□ 0.02
HDLBP-237ENST00000479169 TJP1Q07157 1748 aa15.18■□□□□ 0.02
HDLBP-237ENST00000479169 DPEP1P16444 411 aa15.18■□□□□ 0.02
HDLBP-237ENST00000479169 TGFB2P61812 414 aa15.18■□□□□ 0.02
HDLBP-237ENST00000479169 RC3H1Q5TC82 1133 aaKnown RBP15.18■□□□□ 0.02
HDLBP-237ENST00000479169 ZNF530Q6P9A1 599 aaPredicted RBP15.18■□□□□ 0.02
HDLBP-237ENST00000479169 DCAF5Q96JK2 942 aa15.18■□□□□ 0.02
HDLBP-237ENST00000479169 PLEKHG2Q9H7P9 1386 aa15.18■□□□□ 0.02
HDLBP-237ENST00000479169 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
HDLBP-237ENST00000479169 ADRA2BP18089 450 aa15.17■□□□□ 0.02
HDLBP-237ENST00000479169 RFC4P35249 363 aa15.17■□□□□ 0.02
HDLBP-237ENST00000479169 ARHGAP27Q6ZUM4 889 aa15.17■□□□□ 0.02
HDLBP-237ENST00000479169 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
HDLBP-237ENST00000479169 SCN11AQ9UI33 1791 aa15.16■□□□□ 0.02
HDLBP-237ENST00000479169 VIRMAQ69YN4 1812 aaKnown RBP15.16■□□□□ 0.02
HDLBP-237ENST00000479169 PTCD1O75127 700 aaKnown RBP15.16■□□□□ 0.02
HDLBP-237ENST00000479169 FCHSD2O94868 740 aa15.16■□□□□ 0.02
HDLBP-237ENST00000479169 HSP90AB1P08238 724 aaKnown RBP15.16■□□□□ 0.02
HDLBP-237ENST00000479169 CABP4P57796 275 aa15.16■□□□□ 0.02
HDLBP-237ENST00000479169 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
HDLBP-237ENST00000479169 AEBP1Q8IUX7 1158 aa15.16■□□□□ 0.02
HDLBP-237ENST00000479169 PARP3Q9Y6F1 533 aa15.16■□□□□ 0.02
HDLBP-237ENST00000479169 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
HDLBP-237ENST00000479169 NMRK2Q9NPI5 230 aa15.15■□□□□ 0.02
HDLBP-237ENST00000479169 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
HDLBP-237ENST00000479169 SBF1O95248 1867 aa15.14■□□□□ 0.01
HDLBP-237ENST00000479169 ADAMTS7Q9UKP4 1686 aa15.14■□□□□ 0.01
HDLBP-237ENST00000479169 KCNA3P22001 575 aa15.14■□□□□ 0.01
HDLBP-237ENST00000479169 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
HDLBP-237ENST00000479169 PANK3Q9H999 370 aa15.14■□□□□ 0.01
HDLBP-237ENST00000479169 MTHFSP49914 203 aa15.13■□□□□ 0.01
HDLBP-237ENST00000479169 WDR90Q96KV7 1748 aa15.13■□□□□ 0.01
HDLBP-237ENST00000479169 TOMM70O94826 608 aa15.12■□□□□ 0.01
HDLBP-237ENST00000479169 APLP1P51693 650 aa15.12■□□□□ 0.01
HDLBP-237ENST00000479169 DDR1Q08345 913 aa15.12■□□□□ 0.01
HDLBP-237ENST00000479169 FKBP8Q14318 412 aa15.12■□□□□ 0.01
HDLBP-237ENST00000479169 AMOTQ4VCS5 1084 aa15.12■□□□□ 0.01
HDLBP-237ENST00000479169 C1orf141Q5JVX7 400 aa15.12■□□□□ 0.01
HDLBP-237ENST00000479169 C9orf131Q5VYM1 1079 aa15.12■□□□□ 0.01
HDLBP-237ENST00000479169 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
HDLBP-237ENST00000479169 AFDNP55196 1824 aaKnown RBP15.11■□□□□ 0.01
HDLBP-237ENST00000479169 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
HDLBP-237ENST00000479169 HSPA5P11021 654 aaKnown RBP15.1■□□□□ 0.01
HDLBP-237ENST00000479169 SULT6B1Q6IMI4 303 aa15.1■□□□□ 0.01
HDLBP-237ENST00000479169 DNAJC5GQ8N7S2 189 aa15.1■□□□□ 0.01
HDLBP-237ENST00000479169 TIMELESSQ9UNS1 1208 aa15.1■□□□□ 0.01
HDLBP-237ENST00000479169 KCPQ6ZWJ8 1503 aa15.09■□□□□ 0.01
HDLBP-237ENST00000479169 CHRNA5P30532 468 aa15.09■□□□□ 0.01
HDLBP-237ENST00000479169 INTS5Q6P9B9 1019 aaKnown RBP15.09■□□□□ 0.01
HDLBP-237ENST00000479169 MORC1Q86VD1 984 aa15.09■□□□□ 0.01
HDLBP-237ENST00000479169 PIM2Q9P1W9 311 aa15.09■□□□□ 0.01
HDLBP-237ENST00000479169 PCNTO95613 3336 aa15.09■□□□□ 0.01
HDLBP-237ENST00000479169 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
HDLBP-237ENST00000479169 DALRD3Q5D0E6 543 aaKnown RBP15.08■□□□□ 0
HDLBP-237ENST00000479169 POLRMTO00411 1230 aaKnown RBP15.07■□□□□ 0
HDLBP-237ENST00000479169 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
HDLBP-237ENST00000479169 HTRA3P83110 453 aa15.07■□□□□ 0
HDLBP-237ENST00000479169 DNAJC10Q8IXB1 793 aa15.07■□□□□ 0
HDLBP-237ENST00000479169 RNF181Q9P0P0 153 aa15.07■□□□□ 0
HDLBP-237ENST00000479169 TNRC6CQ9HCJ0 1690 aaKnown RBP15.06■□□□□ 0
HDLBP-237ENST00000479169 IL13P35225 146 aa15.06■□□□□ 0
HDLBP-237ENST00000479169 RBM46Q8TBY0 533 aaKnown RBP15.06■□□□□ 0
HDLBP-237ENST00000479169 PCGF6Q9BYE7 350 aa15.06■□□□□ 0
HDLBP-237ENST00000479169 DLEC1Q9Y238 1755 aa15.06■□□□□ 0
HDLBP-237ENST00000479169 TM4SF1P30408 202 aa15.05■□□□□ -0
HDLBP-237ENST00000479169 USPL1Q5W0Q7 1092 aa15.05■□□□□ -0
HDLBP-237ENST00000479169 C16orf71Q8IYS4 520 aaPredicted RBP15.05■□□□□ -0
HDLBP-237ENST00000479169 LGR6Q9HBX8 967 aa15.05■□□□□ -0
HDLBP-237ENST00000479169 SOS1Q07889 1333 aaPredicted RBP15.05■□□□□ -0
HDLBP-237ENST00000479169 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
HDLBP-237ENST00000479169 MRC1P22897 1456 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms