RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 VIRMAQ69YN4 1812 aaKnown RBP10.29□□□□□ -0.76
RN7SL549P-201ENST00000478997 HMOX1P09601 288 aa10.29□□□□□ -0.76
RN7SL549P-201ENST00000478997 PPP2R1AP30153 589 aa10.29□□□□□ -0.76
RN7SL549P-201ENST00000478997 CFAP53Q96M91 514 aa10.29□□□□□ -0.76
RN7SL549P-201ENST00000478997 CABP4P57796 275 aa10.28□□□□□ -0.76
RN7SL549P-201ENST00000478997 ITPK1Q13572 414 aa10.28□□□□□ -0.76
RN7SL549P-201ENST00000478997 COL23A1Q86Y22 540 aaPredicted RBP10.28□□□□□ -0.76
RN7SL549P-201ENST00000478997 SSFA2P28290 1259 aa10.27□□□□□ -0.77
RN7SL549P-201ENST00000478997 MTHFSDQ2M296 383 aaKnown RBP10.27□□□□□ -0.77
RN7SL549P-201ENST00000478997 LINC00116Q8NCU8 138 aa10.27□□□□□ -0.77
RN7SL549P-201ENST00000478997 AK7Q96M32 723 aa10.27□□□□□ -0.77
RN7SL549P-201ENST00000478997 ARXQ96QS3 562 aa10.27□□□□□ -0.77
RN7SL549P-201ENST00000478997 U2SURPO15042 1029 aaKnown RBP10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 RNMTO43148 476 aaKnown RBP10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 POLD1P28340 1107 aa10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 GAS2L2Q8NHY3 880 aa10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 SLC4A9Q96Q91 983 aa10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 SLC52A2Q9HAB3 445 aa10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 NUDCQ9Y266 331 aa10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 TJP1Q07157 1748 aa10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 CNTNAP4Q9C0A0 1308 aa10.26□□□□□ -0.77
RN7SL549P-201ENST00000478997 SIPA1L3O60292 1781 aaPredicted RBP10.25□□□□□ -0.77
RN7SL549P-201ENST00000478997 UBR2Q8IWV8 1755 aa10.25□□□□□ -0.77
RN7SL549P-201ENST00000478997 CNGB1Q14028 1251 aaPredicted RBP10.25□□□□□ -0.77
RN7SL549P-201ENST00000478997 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
RN7SL549P-201ENST00000478997 NFATC2IPQ8NCF5 419 aa10.25□□□□□ -0.77
RN7SL549P-201ENST00000478997 SYT17Q9BSW7 474 aa10.25□□□□□ -0.77
RN7SL549P-201ENST00000478997 FHDC1Q9C0D6 1143 aaPredicted RBP10.25□□□□□ -0.77
RN7SL549P-201ENST00000478997 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
RN7SL549P-201ENST00000478997 KCPQ6ZWJ8 1503 aa10.24□□□□□ -0.77
RN7SL549P-201ENST00000478997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
RN7SL549P-201ENST00000478997 AMIGO3Q86WK7 504 aa10.24□□□□□ -0.77
RN7SL549P-201ENST00000478997 LGR6Q9HBX8 967 aa10.24□□□□□ -0.77
RN7SL549P-201ENST00000478997 MYH14Q7Z406 1995 aaKnown RBP10.24□□□□□ -0.77
RN7SL549P-201ENST00000478997 CEMIPQ8WUJ3 1361 aa10.24□□□□□ -0.77
RN7SL549P-201ENST00000478997 GNPATO15228 680 aa10.23□□□□□ -0.77
RN7SL549P-201ENST00000478997 FCHSD2O94868 740 aa10.23□□□□□ -0.77
RN7SL549P-201ENST00000478997 ADRA2BP18089 450 aa10.23□□□□□ -0.77
RN7SL549P-201ENST00000478997 PRKAR2BP31323 418 aa10.23□□□□□ -0.77
RN7SL549P-201ENST00000478997 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
RN7SL549P-201ENST00000478997 C4AP0C0L4 1744 aa10.22□□□□□ -0.77
RN7SL549P-201ENST00000478997 GNAT3A8MTJ3 354 aa10.22□□□□□ -0.77
RN7SL549P-201ENST00000478997 MSH5O43196 834 aa10.22□□□□□ -0.77
RN7SL549P-201ENST00000478997 RALBP1Q15311 655 aa10.22□□□□□ -0.77
RN7SL549P-201ENST00000478997 DCAF8L1A6NGE4 600 aa10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 RPS6KA4O75676 772 aa10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 PHF14O94880 888 aa10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 U2AF1L5P0DN76 240 aaPredicted RBP10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 U2AF1Q01081 240 aaKnown RBP eCLIP10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 VSIG10Q8N0Z9 540 aa10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 IL17REQ8NFR9 667 aa10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 PHACTR3Q96KR7 559 aa10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 RTCBQ9Y3I0 505 aaKnown RBP10.21□□□□□ -0.77
RN7SL549P-201ENST00000478997 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
RN7SL549P-201ENST00000478997 MSL1Q68DK7 614 aa10.2□□□□□ -0.78
RN7SL549P-201ENST00000478997 HTATSF1O43719 755 aaKnown RBP10.19□□□□□ -0.78
RN7SL549P-201ENST00000478997 CRKLP46109 303 aaKnown RBP10.19□□□□□ -0.78
RN7SL549P-201ENST00000478997 TEFQ10587 303 aa10.19□□□□□ -0.78
RN7SL549P-201ENST00000478997 TRAPPC3LQ5T215 181 aa10.19□□□□□ -0.78
RN7SL549P-201ENST00000478997 SMIM5Q71RC9 77 aa10.19□□□□□ -0.78
RN7SL549P-201ENST00000478997 CD2APQ9Y5K6 639 aa10.19□□□□□ -0.78
RN7SL549P-201ENST00000478997 KIF13BQ9NQT8 1826 aa10.19□□□□□ -0.78
RN7SL549P-201ENST00000478997 CYP19A1P11511 503 aaPredicted RBP10.18□□□□□ -0.78
RN7SL549P-201ENST00000478997 DDX10Q13206 875 aaKnown RBP10.18□□□□□ -0.78
RN7SL549P-201ENST00000478997 SLC39A6Q13433 755 aa10.18□□□□□ -0.78
RN7SL549P-201ENST00000478997 INTS5Q6P9B9 1019 aaKnown RBP10.18□□□□□ -0.78
RN7SL549P-201ENST00000478997 ZNF790Q6PG37 636 aa10.18□□□□□ -0.78
RN7SL549P-201ENST00000478997 DNAJC10Q8IXB1 793 aa10.18□□□□□ -0.78
RN7SL549P-201ENST00000478997 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
RN7SL549P-201ENST00000478997 HEG1Q9ULI3 1381 aa10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 SOS1Q07889 1333 aaPredicted RBP10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 MYBBP1AQ9BQG0 1328 aaKnown RBP10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 USP42Q9H9J4 1324 aaKnown RBP10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 GYS1P13807 737 aa10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 TTC5Q8N0Z6 440 aa10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 NLGN1Q8N2Q7 840 aa10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 PLEKHF1Q96S99 279 aa10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 CCDC87Q9NVE4 849 aa10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 CHD4Q14839 1912 aa10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 DLG5Q8TDM6 1919 aa10.17□□□□□ -0.78
RN7SL549P-201ENST00000478997 RFC4P35249 363 aa10.16□□□□□ -0.78
RN7SL549P-201ENST00000478997 NLGN2Q8NFZ4 835 aa10.16□□□□□ -0.78
RN7SL549P-201ENST00000478997 RTF1Q92541 710 aaKnown RBP10.16□□□□□ -0.78
RN7SL549P-201ENST00000478997 ZNF496Q96IT1 587 aaPredicted RBP10.16□□□□□ -0.78
RN7SL549P-201ENST00000478997 PNNQ9H307 717 aaKnown RBP10.16□□□□□ -0.78
RN7SL549P-201ENST00000478997 C10orf71Q711Q0 1435 aa10.16□□□□□ -0.78
RN7SL549P-201ENST00000478997 NEFMP07197 916 aa10.15□□□□□ -0.78
RN7SL549P-201ENST00000478997 MMP10P09238 476 aa10.15□□□□□ -0.78
RN7SL549P-201ENST00000478997 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
RN7SL549P-201ENST00000478997 TEX13AQ9BXU3 409 aaPredicted RBP10.15□□□□□ -0.78
RN7SL549P-201ENST00000478997 ZBTB1Q9Y2K1 713 aa10.15□□□□□ -0.78
RN7SL549P-201ENST00000478997 KIAA1551Q9HCM1 1747 aa10.15□□□□□ -0.78
RN7SL549P-201ENST00000478997 COL15A1P39059 1388 aa10.14□□□□□ -0.79
RN7SL549P-201ENST00000478997 BTBD11A6QL63 1104 aa10.14□□□□□ -0.79
RN7SL549P-201ENST00000478997 STARD3NLO95772 234 aa10.14□□□□□ -0.79
RN7SL549P-201ENST00000478997 FMNL2Q96PY5 1086 aa10.14□□□□□ -0.79
RN7SL549P-201ENST00000478997 UTRNP46939 3433 aa10.14□□□□□ -0.79
RN7SL549P-201ENST00000478997 KDM3BQ7LBC6 1761 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms