RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 ITPK1Q13572 414 aa21.58■■□□□ 1.05
GARNL3-215ENST00000478702 ASAP1Q9ULH1 1129 aa21.58■■□□□ 1.05
GARNL3-215ENST00000478702 KNSTRNQ9Y448 316 aa21.58■■□□□ 1.05
GARNL3-215ENST00000478702 CICQ96RK0 1608 aaPredicted RBP21.58■■□□□ 1.04
GARNL3-215ENST00000478702 BRCA1P38398 1863 aaKnown RBP21.58■■□□□ 1.04
GARNL3-215ENST00000478702 POLKQ9UBT6 870 aa21.57■■□□□ 1.04
GARNL3-215ENST00000478702 WWC3Q9ULE0 1092 aa21.57■■□□□ 1.04
GARNL3-215ENST00000478702 MYH14Q7Z406 1995 aaKnown RBP21.57■■□□□ 1.04
GARNL3-215ENST00000478702 PHKG2P15735 406 aa21.56■■□□□ 1.04
GARNL3-215ENST00000478702 AMER1Q5JTC6 1135 aaPredicted RBP21.56■■□□□ 1.04
GARNL3-215ENST00000478702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.56■■□□□ 1.04
GARNL3-215ENST00000478702 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
GARNL3-215ENST00000478702 TNNT2P45379 298 aaPredicted RBP21.55■■□□□ 1.04
GARNL3-215ENST00000478702 GPBP1L1Q9HC44 474 aaPredicted RBP21.55■■□□□ 1.04
GARNL3-215ENST00000478702 TMOD3Q9NYL9 352 aa21.55■■□□□ 1.04
GARNL3-215ENST00000478702 IFNL2Q8IZJ0 200 aa21.54■■□□□ 1.04
GARNL3-215ENST00000478702 KDRP35968 1356 aa21.53■■□□□ 1.04
GARNL3-215ENST00000478702 GNPATO15228 680 aa21.53■■□□□ 1.04
GARNL3-215ENST00000478702 ATP6V1AP38606 617 aa21.53■■□□□ 1.04
GARNL3-215ENST00000478702 ZNF526Q8TF50 670 aaPredicted RBP21.53■■□□□ 1.04
GARNL3-215ENST00000478702 ATG3Q9NT62 314 aa21.53■■□□□ 1.04
GARNL3-215ENST00000478702 PER1O15534 1290 aaPredicted RBP21.52■■□□□ 1.04
GARNL3-215ENST00000478702 MORC1Q86VD1 984 aa21.52■■□□□ 1.04
GARNL3-215ENST00000478702 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
GARNL3-215ENST00000478702 PXDNLA1KZ92 1463 aa21.51■■□□□ 1.03
GARNL3-215ENST00000478702 NPC1L1Q9UHC9 1359 aa21.5■■□□□ 1.03
GARNL3-215ENST00000478702 SLC4A9Q96Q91 983 aa21.5■■□□□ 1.03
GARNL3-215ENST00000478702 VIRMAQ69YN4 1812 aaKnown RBP21.5■■□□□ 1.03
GARNL3-215ENST00000478702 ARFGEF1Q9Y6D6 1849 aa21.49■■□□□ 1.03
GARNL3-215ENST00000478702 PLEKHG2Q9H7P9 1386 aa21.48■■□□□ 1.03
GARNL3-215ENST00000478702 MMP10P09238 476 aa21.47■■□□□ 1.03
GARNL3-215ENST00000478702 HSPA6P17066 643 aa21.46■■□□□ 1.03
GARNL3-215ENST00000478702 IFFO2Q5TF58 517 aa21.46■■□□□ 1.03
GARNL3-215ENST00000478702 TJP1Q07157 1748 aa21.46■■□□□ 1.03
GARNL3-215ENST00000478702 SCN11AQ9UI33 1791 aa21.46■■□□□ 1.03
GARNL3-215ENST00000478702 KDM6AO15550 1401 aaPredicted RBP21.46■■□□□ 1.03
GARNL3-215ENST00000478702 C10orf71Q711Q0 1435 aa21.46■■□□□ 1.03
GARNL3-215ENST00000478702 KIF3CO14782 793 aa21.45■■□□□ 1.02
GARNL3-215ENST00000478702 ERVV-2B6SEH9 535 aa21.43■■□□□ 1.02
GARNL3-215ENST00000478702 TRAPPC3LQ5T215 181 aa21.43■■□□□ 1.02
GARNL3-215ENST00000478702 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
GARNL3-215ENST00000478702 ARHGEF1Q92888 912 aaKnown RBP21.42■■□□□ 1.02
GARNL3-215ENST00000478702 ADAMTS7Q9UKP4 1686 aa21.42■■□□□ 1.02
GARNL3-215ENST00000478702 CNTNAP4Q9C0A0 1308 aa21.41■■□□□ 1.02
GARNL3-215ENST00000478702 CC2D1BQ5T0F9 858 aaKnown RBP21.41■■□□□ 1.02
GARNL3-215ENST00000478702 RC3H1Q5TC82 1133 aaKnown RBP21.41■■□□□ 1.02
GARNL3-215ENST00000478702 RBM42Q9BTD8 480 aaKnown RBP21.41■■□□□ 1.02
GARNL3-215ENST00000478702 SBF1O95248 1867 aa21.41■■□□□ 1.02
GARNL3-215ENST00000478702 COL3A1P02461 1466 aaPredicted RBP21.4■■□□□ 1.02
GARNL3-215ENST00000478702 A0A0G2JLW4 131 aa21.4■■□□□ 1.02
GARNL3-215ENST00000478702 GYS1P13807 737 aa21.4■■□□□ 1.02
GARNL3-215ENST00000478702 TGFB2P61812 414 aa21.4■■□□□ 1.02
GARNL3-215ENST00000478702 NLGN1Q8N2Q7 840 aa21.4■■□□□ 1.02
GARNL3-215ENST00000478702 DCAF5Q96JK2 942 aa21.4■■□□□ 1.02
GARNL3-215ENST00000478702 RPS6KA4O75676 772 aa21.38■■□□□ 1.01
GARNL3-215ENST00000478702 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
GARNL3-215ENST00000478702 ADRA2BP18089 450 aa21.38■■□□□ 1.01
GARNL3-215ENST00000478702 BCS1LQ9Y276 419 aa21.38■■□□□ 1.01
GARNL3-215ENST00000478702 DPEP1P16444 411 aa21.37■■□□□ 1.01
GARNL3-215ENST00000478702 PLEKHO1Q53GL0 409 aaPredicted RBP21.37■■□□□ 1.01
GARNL3-215ENST00000478702 ZNF530Q6P9A1 599 aaPredicted RBP21.37■■□□□ 1.01
GARNL3-215ENST00000478702 AFDNP55196 1824 aaKnown RBP21.36■■□□□ 1.01
GARNL3-215ENST00000478702 AEBP1Q8IUX7 1158 aa21.36■■□□□ 1.01
GARNL3-215ENST00000478702 RFC4P35249 363 aa21.35■■□□□ 1.01
GARNL3-215ENST00000478702 MTHFSP49914 203 aa21.35■■□□□ 1.01
GARNL3-215ENST00000478702 CABP4P57796 275 aa21.35■■□□□ 1.01
GARNL3-215ENST00000478702 CCDC87Q9NVE4 849 aa21.35■■□□□ 1.01
GARNL3-215ENST00000478702 KCNA3P22001 575 aa21.34■■□□□ 1.01
GARNL3-215ENST00000478702 IL13P35225 146 aa21.34■■□□□ 1.01
GARNL3-215ENST00000478702 AMOTQ4VCS5 1084 aa21.34■■□□□ 1.01
GARNL3-215ENST00000478702 WDR90Q96KV7 1748 aa21.34■■□□□ 1.01
GARNL3-215ENST00000478702 PARP3Q9Y6F1 533 aa21.33■■□□□ 1.01
GARNL3-215ENST00000478702 PTCD1O75127 700 aaKnown RBP21.32■■□□□ 1
GARNL3-215ENST00000478702 ARHGAP27Q6ZUM4 889 aa21.32■■□□□ 1
GARNL3-215ENST00000478702 CCDC88AQ3V6T2 1871 aa21.32■■□□□ 1
GARNL3-215ENST00000478702 FCHSD2O94868 740 aa21.31■■□□□ 1
GARNL3-215ENST00000478702 CRKLP46109 303 aaKnown RBP21.31■■□□□ 1
GARNL3-215ENST00000478702 NFATC2IPQ8NCF5 419 aa21.31■■□□□ 1
GARNL3-215ENST00000478702 SRP68Q9UHB9 627 aaKnown RBP21.31■■□□□ 1
GARNL3-215ENST00000478702 DLEC1Q9Y238 1755 aa21.31■■□□□ 1
GARNL3-215ENST00000478702 CNGB1Q14028 1251 aaPredicted RBP21.3■■□□□ 1
GARNL3-215ENST00000478702 NMRK2Q9NPI5 230 aa21.3■■□□□ 1
GARNL3-215ENST00000478702 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
GARNL3-215ENST00000478702 NRXN2Q9P2S2 1712 aa21.29■■□□□ 1
GARNL3-215ENST00000478702 TOMM70O94826 608 aa21.29■■□□□ 1
GARNL3-215ENST00000478702 DDR1Q08345 913 aa21.29■■□□□ 1
GARNL3-215ENST00000478702 FKBP8Q14318 412 aa21.29■■□□□ 1
GARNL3-215ENST00000478702 C1orf141Q5JVX7 400 aa21.28■■□□□ 1
GARNL3-215ENST00000478702 SULT6B1Q6IMI4 303 aa21.28■■□□□ 1
GARNL3-215ENST00000478702 UBR2Q8IWV8 1755 aa21.27■■□□□ 1
GARNL3-215ENST00000478702 TNRC6CQ9HCJ0 1690 aaKnown RBP21.27■■□□□ 1
GARNL3-215ENST00000478702 DIAPH1O60610 1272 aaKnown RBP21.26■□□□□ 0.99
GARNL3-215ENST00000478702 APLP1P51693 650 aa21.26■□□□□ 0.99
GARNL3-215ENST00000478702 INTS5Q6P9B9 1019 aaKnown RBP21.26■□□□□ 0.99
GARNL3-215ENST00000478702 DNAJC5GQ8N7S2 189 aa21.26■□□□□ 0.99
GARNL3-215ENST00000478702 MRC1P22897 1456 aa21.26■□□□□ 0.99
GARNL3-215ENST00000478702 C9orf131Q5VYM1 1079 aa21.25■□□□□ 0.99
GARNL3-215ENST00000478702 PIM2Q9P1W9 311 aa21.25■□□□□ 0.99
GARNL3-215ENST00000478702 KCPQ6ZWJ8 1503 aa21.24■□□□□ 0.99
GARNL3-215ENST00000478702 POLRMTO00411 1230 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms