RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 ZNF530Q6P9A1 599 aaPredicted RBP29.95■■■□□ 2.39
MCF2L2-210ENST00000478652 MYH14Q7Z406 1995 aaKnown RBP29.95■■■□□ 2.38
MCF2L2-210ENST00000478652 GPR162Q16538 588 aa29.94■■■□□ 2.38
MCF2L2-210ENST00000478652 PLEKHO1Q53GL0 409 aaPredicted RBP29.94■■■□□ 2.38
MCF2L2-210ENST00000478652 ATP6V1AP38606 617 aa29.93■■■□□ 2.38
MCF2L2-210ENST00000478652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.92■■■□□ 2.38
MCF2L2-210ENST00000478652 HMGB2P26583 209 aaKnown RBP29.92■■■□□ 2.38
MCF2L2-210ENST00000478652 IL13P35225 146 aa29.92■■■□□ 2.38
MCF2L2-210ENST00000478652 SULT6B1Q6IMI4 303 aa29.92■■■□□ 2.38
MCF2L2-210ENST00000478652 PELP1Q8IZL8 1130 aaKnown RBP29.92■■■□□ 2.38
MCF2L2-210ENST00000478652 DCAF5Q96JK2 942 aa29.91■■■□□ 2.38
MCF2L2-210ENST00000478652 SLC4A9Q96Q91 983 aa29.91■■■□□ 2.38
MCF2L2-210ENST00000478652 ERVV-2B6SEH9 535 aa29.9■■■□□ 2.38
MCF2L2-210ENST00000478652 PER1O15534 1290 aaPredicted RBP29.9■■■□□ 2.38
MCF2L2-210ENST00000478652 C4AP0C0L4 1744 aa29.89■■■□□ 2.38
MCF2L2-210ENST00000478652 HSP90AB1P08238 724 aaKnown RBP29.89■■■□□ 2.38
MCF2L2-210ENST00000478652 AMOTQ4VCS5 1084 aa29.89■■■□□ 2.38
MCF2L2-210ENST00000478652 ZNF784Q8NCA9 323 aaPredicted RBP29.89■■■□□ 2.38
MCF2L2-210ENST00000478652 TJP1Q07157 1748 aa29.88■■■□□ 2.37
MCF2L2-210ENST00000478652 GNPATO15228 680 aa29.88■■■□□ 2.37
MCF2L2-210ENST00000478652 SSFA2P28290 1259 aa29.88■■■□□ 2.37
MCF2L2-210ENST00000478652 GOLGB1Q14789 3259 aaKnown RBP29.86■■■□□ 2.37
MCF2L2-210ENST00000478652 YBX3P16989 372 aaKnown RBP eCLIP29.86■■■□□ 2.37
MCF2L2-210ENST00000478652 MTHFSP49914 203 aa29.86■■■□□ 2.37
MCF2L2-210ENST00000478652 CC2D1BQ5T0F9 858 aaKnown RBP29.85■■■□□ 2.37
MCF2L2-210ENST00000478652 CABP4P57796 275 aa29.84■■■□□ 2.37
MCF2L2-210ENST00000478652 RBM42Q9BTD8 480 aaKnown RBP29.84■■■□□ 2.37
MCF2L2-210ENST00000478652 CICQ96RK0 1608 aaPredicted RBP29.84■■■□□ 2.37
MCF2L2-210ENST00000478652 C1orf141Q5JVX7 400 aa29.83■■■□□ 2.37
MCF2L2-210ENST00000478652 KIF13BQ9NQT8 1826 aa29.82■■■□□ 2.36
MCF2L2-210ENST00000478652 CD2APQ9Y5K6 639 aa29.81■■■□□ 2.36
MCF2L2-210ENST00000478652 KIAA1551Q9HCM1 1747 aa29.81■■■□□ 2.36
MCF2L2-210ENST00000478652 ADAMTS7Q9UKP4 1686 aa29.8■■■□□ 2.36
MCF2L2-210ENST00000478652 COL3A1P02461 1466 aaPredicted RBP29.8■■■□□ 2.36
MCF2L2-210ENST00000478652 HMOX1P09601 288 aa29.79■■■□□ 2.36
MCF2L2-210ENST00000478652 NFATC2IPQ8NCF5 419 aa29.78■■■□□ 2.36
MCF2L2-210ENST00000478652 MRC1P22897 1456 aa29.77■■■□□ 2.36
MCF2L2-210ENST00000478652 N4BP2Q86UW6 1770 aaPredicted RBP29.77■■■□□ 2.36
MCF2L2-210ENST00000478652 CNTNAP4Q9C0A0 1308 aa29.76■■■□□ 2.36
MCF2L2-210ENST00000478652 CNGB1Q14028 1251 aaPredicted RBP29.76■■■□□ 2.35
MCF2L2-210ENST00000478652 PTCD1O75127 700 aaKnown RBP29.75■■■□□ 2.35
MCF2L2-210ENST00000478652 RTCBQ9Y3I0 505 aaKnown RBP29.75■■■□□ 2.35
MCF2L2-210ENST00000478652 NPC1L1Q9UHC9 1359 aa29.74■■■□□ 2.35
MCF2L2-210ENST00000478652 AKAP4Q5JQC9 854 aa29.73■■■□□ 2.35
MCF2L2-210ENST00000478652 RC3H1Q5TC82 1133 aaKnown RBP29.73■■■□□ 2.35
MCF2L2-210ENST00000478652 DIAPH1O60610 1272 aaKnown RBP29.72■■■□□ 2.35
MCF2L2-210ENST00000478652 LGR6Q9HBX8 967 aa29.72■■■□□ 2.35
MCF2L2-210ENST00000478652 UBR2Q8IWV8 1755 aa29.72■■■□□ 2.35
MCF2L2-210ENST00000478652 TRAPPC3LQ5T215 181 aa29.71■■■□□ 2.35
MCF2L2-210ENST00000478652 ARHGEF1Q92888 912 aaKnown RBP29.71■■■□□ 2.35
MCF2L2-210ENST00000478652 WWC3Q9ULE0 1092 aa29.71■■■□□ 2.35
MCF2L2-210ENST00000478652 GRIN3BO60391 1043 aa29.7■■■□□ 2.35
MCF2L2-210ENST00000478652 MMP10P09238 476 aa29.7■■■□□ 2.35
MCF2L2-210ENST00000478652 BRCA1P38398 1863 aaKnown RBP29.7■■■□□ 2.34
MCF2L2-210ENST00000478652 RPS6KA4O75676 772 aa29.69■■■□□ 2.34
MCF2L2-210ENST00000478652 SIPA1L3O60292 1781 aaPredicted RBP29.68■■■□□ 2.34
MCF2L2-210ENST00000478652 KCPQ6ZWJ8 1503 aa29.68■■■□□ 2.34
MCF2L2-210ENST00000478652 CRKLP46109 303 aaKnown RBP29.68■■■□□ 2.34
MCF2L2-210ENST00000478652 MTHFSDQ2M296 383 aaKnown RBP29.68■■■□□ 2.34
MCF2L2-210ENST00000478652 SLC52A2Q9HAB3 445 aa29.68■■■□□ 2.34
MCF2L2-210ENST00000478652 RNMTO43148 476 aaKnown RBP29.67■■■□□ 2.34
MCF2L2-210ENST00000478652 ADRA2BP18089 450 aa29.66■■■□□ 2.34
MCF2L2-210ENST00000478652 GYS1P13807 737 aa29.65■■■□□ 2.34
MCF2L2-210ENST00000478652 PXDNLA1KZ92 1463 aa29.65■■■□□ 2.34
MCF2L2-210ENST00000478652 C10orf71Q711Q0 1435 aa29.63■■■□□ 2.33
MCF2L2-210ENST00000478652 RFC4P35249 363 aa29.63■■■□□ 2.33
MCF2L2-210ENST00000478652 SLC39A6Q13433 755 aa29.63■■■□□ 2.33
MCF2L2-210ENST00000478652 NLGN1Q8N2Q7 840 aa29.62■■■□□ 2.33
MCF2L2-210ENST00000478652 DNAJC10Q8IXB1 793 aa29.61■■■□□ 2.33
MCF2L2-210ENST00000478652 SRP68Q9UHB9 627 aaKnown RBP29.61■■■□□ 2.33
MCF2L2-210ENST00000478652 U2SURPO15042 1029 aaKnown RBP29.6■■■□□ 2.33
MCF2L2-210ENST00000478652 INTS5Q6P9B9 1019 aaKnown RBP29.6■■■□□ 2.33
MCF2L2-210ENST00000478652 AFDNP55196 1824 aaKnown RBP29.59■■■□□ 2.33
MCF2L2-210ENST00000478652 ATP10DQ9P241 1426 aa29.57■■■□□ 2.32
MCF2L2-210ENST00000478652 USP42Q9H9J4 1324 aaKnown RBP29.57■■■□□ 2.32
MCF2L2-210ENST00000478652 ADCY9O60503 1353 aa29.56■■■□□ 2.32
MCF2L2-210ENST00000478652 ARFGEF1Q9Y6D6 1849 aa29.56■■■□□ 2.32
MCF2L2-210ENST00000478652 CCDC87Q9NVE4 849 aa29.55■■■□□ 2.32
MCF2L2-210ENST00000478652 C1QTNF8P60827 252 aa29.54■■■□□ 2.32
MCF2L2-210ENST00000478652 FKBP8Q14318 412 aa29.54■■■□□ 2.32
MCF2L2-210ENST00000478652 SOS1Q07889 1333 aaPredicted RBP29.53■■■□□ 2.32
MCF2L2-210ENST00000478652 CYP19A1P11511 503 aaPredicted RBP29.53■■■□□ 2.32
MCF2L2-210ENST00000478652 PARP3Q9Y6F1 533 aa29.53■■■□□ 2.32
MCF2L2-210ENST00000478652 A0A0G2JLW4 131 aa29.52■■■□□ 2.32
MCF2L2-210ENST00000478652 DDR1Q08345 913 aa29.52■■■□□ 2.32
MCF2L2-210ENST00000478652 GIGYF1O75420 1035 aaPredicted RBP29.51■■■□□ 2.31
MCF2L2-210ENST00000478652 TGFB2P61812 414 aa29.5■■■□□ 2.31
MCF2L2-210ENST00000478652 IL17REQ8NFR9 667 aa29.5■■■□□ 2.31
MCF2L2-210ENST00000478652 ZBTB1Q9Y2K1 713 aa29.5■■■□□ 2.31
MCF2L2-210ENST00000478652 NRXN2Q9P2S2 1712 aa29.49■■■□□ 2.31
MCF2L2-210ENST00000478652 DPEP1P16444 411 aa29.49■■■□□ 2.31
MCF2L2-210ENST00000478652 GAS2L2Q8NHY3 880 aa29.48■■■□□ 2.31
MCF2L2-210ENST00000478652 PHACTR3Q96KR7 559 aa29.48■■■□□ 2.31
MCF2L2-210ENST00000478652 RSPH6AQ9H0K4 717 aa29.48■■■□□ 2.31
MCF2L2-210ENST00000478652 COL15A1P39059 1388 aa29.48■■■□□ 2.31
MCF2L2-210ENST00000478652 GNAT3A8MTJ3 354 aa29.47■■■□□ 2.31
MCF2L2-210ENST00000478652 PPP2R1AP30153 589 aa29.47■■■□□ 2.31
MCF2L2-210ENST00000478652 PRKAR2BP31323 418 aa29.47■■■□□ 2.31
MCF2L2-210ENST00000478652 USPL1Q5W0Q7 1092 aa29.46■■■□□ 2.31
MCF2L2-210ENST00000478652 BCS1LQ9Y276 419 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms