RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	DDX19B	Q9UMR2	479 aa		12.21	□□□□□ -0.45
ATG7-223	ENST00000478638	PCDHB15	Q9Y5E8	787 aa		12.21	□□□□□ -0.45
ATG7-223	ENST00000478638	ABCC4	O15439	1325 aa		12.2	□□□□□ -0.46
ATG7-223	ENST00000478638	CACNA1F	O60840	1977 aa		12.2	□□□□□ -0.46
ATG7-223	ENST00000478638	PDE4A	P27815	886 aa		12.2	□□□□□ -0.46
ATG7-223	ENST00000478638	KRT27	Q7Z3Y8	459 aa		12.2	□□□□□ -0.46
ATG7-223	ENST00000478638	GAS2L2	Q8NHY3	880 aa		12.2	□□□□□ -0.46
ATG7-223	ENST00000478638	BABAM1	Q9NWV8	329 aa		12.2	□□□□□ -0.46
ATG7-223	ENST00000478638	NOB1	Q9ULX3	412 aa	Known RBP	12.2	□□□□□ -0.46
ATG7-223	ENST00000478638	ADAMTS7	Q9UKP4	1686 aa		12.19	□□□□□ -0.46
ATG7-223	ENST00000478638	PLEKHG2	Q9H7P9	1386 aa		12.19	□□□□□ -0.46
ATG7-223	ENST00000478638	HDAC1	Q13547	482 aa	Predicted RBP	12.19	□□□□□ -0.46
ATG7-223	ENST00000478638	TSPYL6	Q8N831	410 aa		12.19	□□□□□ -0.46
ATG7-223	ENST00000478638	NWD2	Q9ULI1	1742 aa		12.19	□□□□□ -0.46
ATG7-223	ENST00000478638	PLCH1	Q4KWH8	1693 aa		12.19	□□□□□ -0.46
ATG7-223	ENST00000478638	COL18A1	P39060	1754 aa		12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	SOS1	Q07889	1333 aa	Predicted RBP	12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	MTHFSD	Q2M296	383 aa	Known RBP	12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	TWISTNB	Q3B726	338 aa	Predicted RBP	12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	C8orf58	Q8NAV2	365 aa		12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	ZCRB1	Q8TBF4	217 aa	Known RBP	12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	ZBTB40	Q9NUA8	1239 aa		12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	RGS12	O14924	1447 aa		12.18	□□□□□ -0.46
ATG7-223	ENST00000478638	DDX54	Q8TDD1	881 aa	Known RBP	12.17	□□□□□ -0.46
ATG7-223	ENST00000478638	OVOS2	A0A0G2JMS6	1433 aa		12.17	□□□□□ -0.46
ATG7-223	ENST00000478638	RGPD2	P0DJD1	1756 aa		12.17	□□□□□ -0.46
ATG7-223	ENST00000478638	CEMIP	Q8WUJ3	1361 aa		12.17	□□□□□ -0.46
ATG7-223	ENST00000478638	MSH5	O43196	834 aa		12.16	□□□□□ -0.46
ATG7-223	ENST00000478638	DCTN1	Q14203	1278 aa		12.16	□□□□□ -0.46
ATG7-223	ENST00000478638	FTSJ3	Q8IY81	847 aa	Known RBP	12.16	□□□□□ -0.46
ATG7-223	ENST00000478638	TMEM57	Q8N5G2	664 aa		12.16	□□□□□ -0.46
ATG7-223	ENST00000478638	CHMP4B	Q9H444	224 aa	Known RBP	12.16	□□□□□ -0.46
ATG7-223	ENST00000478638	SPG7	Q9UQ90	795 aa		12.16	□□□□□ -0.46
ATG7-223	ENST00000478638	FAM208A	Q9UK61	1670 aa	Known RBP	12.16	□□□□□ -0.46
ATG7-223	ENST00000478638	KDM3B	Q7LBC6	1761 aa		12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	NRAP	Q86VF7	1730 aa		12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	GLI3	P10071	1580 aa		12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	SMC5	Q8IY18	1101 aa		12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	API5	Q9BZZ5	524 aa	Known RBP	12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	RWDD1	Q9H446	243 aa	Predicted RBP	12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	MAP3K5	Q99683	1374 aa		12.15	□□□□□ -0.46
ATG7-223	ENST00000478638	C8orf34	Q49A92	452 aa		12.14	□□□□□ -0.47
ATG7-223	ENST00000478638	AMOT	Q4VCS5	1084 aa		12.14	□□□□□ -0.47
ATG7-223	ENST00000478638	FAM182B	Q5T319	152 aa		12.14	□□□□□ -0.47
ATG7-223	ENST00000478638	FAM196A	Q6ZSG2	479 aa		12.14	□□□□□ -0.47
ATG7-223	ENST00000478638	DISP2	A7MBM2	1401 aa		12.13	□□□□□ -0.47
ATG7-223	ENST00000478638	SIPA1L3	O60292	1781 aa	Predicted RBP	12.13	□□□□□ -0.47
ATG7-223	ENST00000478638	ZBTB7B	O15156	539 aa	Predicted RBP	12.13	□□□□□ -0.47
ATG7-223	ENST00000478638	FAM161A	Q3B820	660 aa		12.13	□□□□□ -0.47
ATG7-223	ENST00000478638	MCM10	Q7L590	875 aa		12.13	□□□□□ -0.47
ATG7-223	ENST00000478638	MARCH10	Q8NA82	808 aa	Predicted RBP	12.13	□□□□□ -0.47
ATG7-223	ENST00000478638	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.13	□□□□□ -0.47	6e-9	■■■□□ 18.9
ATG7-223	ENST00000478638	GNAT3	A8MTJ3	354 aa		12.12	□□□□□ -0.47
ATG7-223	ENST00000478638	INTS3	Q68E01	1043 aa	Known RBP	12.12	□□□□□ -0.47
ATG7-223	ENST00000478638	SKAP1	Q86WV1	359 aa		12.12	□□□□□ -0.47
ATG7-223	ENST00000478638	LAS1L	Q9Y4W2	734 aa	Known RBP	12.12	□□□□□ -0.47
ATG7-223	ENST00000478638	RGPD5	Q99666	1765 aa		12.12	□□□□□ -0.47
ATG7-223	ENST00000478638	PTPRC	P08575	1304 aa		12.11	□□□□□ -0.47
ATG7-223	ENST00000478638	PCDH11X	Q9BZA7	1347 aa		12.11	□□□□□ -0.47
ATG7-223	ENST00000478638	PCDH11Y	Q9BZA8	1340 aa		12.11	□□□□□ -0.47
ATG7-223	ENST00000478638	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.11	□□□□□ -0.47
ATG7-223	ENST00000478638	SF3B2	Q13435	895 aa	Known RBP	12.1	□□□□□ -0.47
ATG7-223	ENST00000478638	C1orf141	Q5JVX7	400 aa		12.1	□□□□□ -0.47
ATG7-223	ENST00000478638	ITPRIP	Q8IWB1	547 aa		12.1	□□□□□ -0.47
ATG7-223	ENST00000478638	IFNL2	Q8IZJ0	200 aa		12.1	□□□□□ -0.47
ATG7-223	ENST00000478638	IL17RE	Q8NFR9	667 aa		12.1	□□□□□ -0.47
ATG7-223	ENST00000478638	RTF1	Q92541	710 aa	Known RBP	12.1	□□□□□ -0.47
ATG7-223	ENST00000478638	PDZRN3	Q9UPQ7	1066 aa		12.1	□□□□□ -0.47
ATG7-223	ENST00000478638	MEGF6	O75095	1541 aa		12.1	□□□□□ -0.47
ATG7-223	ENST00000478638	HSP90AB1	P08238	724 aa	Known RBP	12.09	□□□□□ -0.47
ATG7-223	ENST00000478638	IPO9	Q96P70	1041 aa	Known RBP	12.09	□□□□□ -0.47
ATG7-223	ENST00000478638	TNS2	Q63HR2	1409 aa		12.09	□□□□□ -0.47
ATG7-223	ENST00000478638	PXDNL	A1KZ92	1463 aa		12.08	□□□□□ -0.47
ATG7-223	ENST00000478638	CYP27B1	O15528	508 aa		12.08	□□□□□ -0.48
ATG7-223	ENST00000478638	TRIM37	O94972	964 aa		12.08	□□□□□ -0.48
ATG7-223	ENST00000478638	ANP32A	P39687	249 aa	Known RBP	12.08	□□□□□ -0.48
ATG7-223	ENST00000478638	CCDC125	Q86Z20	511 aa		12.08	□□□□□ -0.48
ATG7-223	ENST00000478638	ACSBG1	Q96GR2	724 aa		12.08	□□□□□ -0.48
ATG7-223	ENST00000478638	ATP10D	Q9P241	1426 aa		12.08	□□□□□ -0.48
ATG7-223	ENST00000478638	PKD1L3	Q7Z443	1732 aa		12.08	□□□□□ -0.48
ATG7-223	ENST00000478638	SOCS7	O14512	581 aa		12.07	□□□□□ -0.48
ATG7-223	ENST00000478638	HOXB7	P09629	217 aa		12.07	□□□□□ -0.48
ATG7-223	ENST00000478638	PHKG2	P15735	406 aa		12.07	□□□□□ -0.48
ATG7-223	ENST00000478638	TAF7	Q15545	349 aa	Predicted RBP	12.07	□□□□□ -0.48
ATG7-223	ENST00000478638	KRT24	Q2M2I5	525 aa		12.07	□□□□□ -0.48
ATG7-223	ENST00000478638	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
ATG7-223	ENST00000478638	SYTL4	Q96C24	671 aa	Predicted RBP	12.07	□□□□□ -0.48
ATG7-223	ENST00000478638	TSPYL4	Q9UJ04	414 aa		12.07	□□□□□ -0.48
ATG7-223	ENST00000478638	HEG1	Q9ULI3	1381 aa		12.06	□□□□□ -0.48
ATG7-223	ENST00000478638	SCN11A	Q9UI33	1791 aa		12.06	□□□□□ -0.48
ATG7-223	ENST00000478638	PRIM1	P49642	420 aa	Known RBP	12.06	□□□□□ -0.48
ATG7-223	ENST00000478638	AKAP4	Q5JQC9	854 aa		12.06	□□□□□ -0.48
ATG7-223	ENST00000478638	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.06	□□□□□ -0.48
ATG7-223	ENST00000478638	THSD7A	Q9UPZ6	1657 aa		12.06	□□□□□ -0.48
ATG7-223	ENST00000478638	PARP4	Q9UKK3	1724 aa	Known RBP	12.06	□□□□□ -0.48
ATG7-223	ENST00000478638	ELL2	O00472	640 aa	Predicted RBP	12.05	□□□□□ -0.48
ATG7-223	ENST00000478638	APBA3	O96018	575 aa		12.05	□□□□□ -0.48

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