RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 TIMELESSQ9UNS1 1208 aa17.72■□□□□ 0.43
TDP2-204ENST00000478507 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
TDP2-204ENST00000478507 COL5A3P25940 1745 aaPredicted RBP17.71■□□□□ 0.43
TDP2-204ENST00000478507 GNPATO15228 680 aa17.7■□□□□ 0.42
TDP2-204ENST00000478507 SLC4A9Q96Q91 983 aa17.7■□□□□ 0.42
TDP2-204ENST00000478507 ATP6V1AP38606 617 aa17.69■□□□□ 0.42
TDP2-204ENST00000478507 GPBP1L1Q9HC44 474 aaPredicted RBP17.69■□□□□ 0.42
TDP2-204ENST00000478507 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
TDP2-204ENST00000478507 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
TDP2-204ENST00000478507 MYH14Q7Z406 1995 aaKnown RBP17.67■□□□□ 0.42
TDP2-204ENST00000478507 ERVV-2B6SEH9 535 aa17.66■□□□□ 0.42
TDP2-204ENST00000478507 MMP10P09238 476 aa17.66■□□□□ 0.42
TDP2-204ENST00000478507 WWC3Q9ULE0 1092 aa17.66■□□□□ 0.42
TDP2-204ENST00000478507 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
TDP2-204ENST00000478507 C10orf71Q711Q0 1435 aa17.65■□□□□ 0.42
TDP2-204ENST00000478507 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
TDP2-204ENST00000478507 C4AP0C0L4 1744 aa17.65■□□□□ 0.42
TDP2-204ENST00000478507 TNNT2P45379 298 aaPredicted RBP17.65■□□□□ 0.42
TDP2-204ENST00000478507 RC3H1Q5TC82 1133 aaKnown RBP17.64■□□□□ 0.41
TDP2-204ENST00000478507 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
TDP2-204ENST00000478507 CNTNAP4Q9C0A0 1308 aa17.64■□□□□ 0.41
TDP2-204ENST00000478507 CLSPNQ9HAW4 1339 aa17.64■□□□□ 0.41
TDP2-204ENST00000478507 ZNF526Q8TF50 670 aaPredicted RBP17.63■□□□□ 0.41
TDP2-204ENST00000478507 RTCBQ9Y3I0 505 aaKnown RBP17.63■□□□□ 0.41
TDP2-204ENST00000478507 KIF3CO14782 793 aa17.62■□□□□ 0.41
TDP2-204ENST00000478507 HSPA6P17066 643 aa17.62■□□□□ 0.41
TDP2-204ENST00000478507 ADRA2BP18089 450 aa17.62■□□□□ 0.41
TDP2-204ENST00000478507 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
TDP2-204ENST00000478507 NLGN1Q8N2Q7 840 aa17.62■□□□□ 0.41
TDP2-204ENST00000478507 ARHGEF1Q92888 912 aaKnown RBP17.62■□□□□ 0.41
TDP2-204ENST00000478507 HSP90AB1P08238 724 aaKnown RBP17.61■□□□□ 0.41
TDP2-204ENST00000478507 GYS1P13807 737 aa17.61■□□□□ 0.41
TDP2-204ENST00000478507 TGFB2P61812 414 aa17.61■□□□□ 0.41
TDP2-204ENST00000478507 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
TDP2-204ENST00000478507 PANK3Q9H999 370 aa17.6■□□□□ 0.41
TDP2-204ENST00000478507 TJP1Q07157 1748 aa17.59■□□□□ 0.41
TDP2-204ENST00000478507 ADAMTS7Q9UKP4 1686 aa17.59■□□□□ 0.41
TDP2-204ENST00000478507 AMOTQ4VCS5 1084 aa17.59■□□□□ 0.41
TDP2-204ENST00000478507 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
TDP2-204ENST00000478507 IFFO2Q5TF58 517 aa17.59■□□□□ 0.41
TDP2-204ENST00000478507 RBM42Q9BTD8 480 aaKnown RBP17.59■□□□□ 0.41
TDP2-204ENST00000478507 A0A0G2JLW4 131 aa17.58■□□□□ 0.4
TDP2-204ENST00000478507 ZNF530Q6P9A1 599 aaPredicted RBP17.58■□□□□ 0.4
TDP2-204ENST00000478507 AEBP1Q8IUX7 1158 aa17.58■□□□□ 0.4
TDP2-204ENST00000478507 POLR3GLQ9BT43 218 aa17.58■□□□□ 0.4
TDP2-204ENST00000478507 ARFGEF1Q9Y6D6 1849 aa17.58■□□□□ 0.4
TDP2-204ENST00000478507 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.4
TDP2-204ENST00000478507 HSPA5P11021 654 aaKnown RBP17.56■□□□□ 0.4
TDP2-204ENST00000478507 DPEP1P16444 411 aa17.56■□□□□ 0.4
TDP2-204ENST00000478507 KCNA3P22001 575 aa17.56■□□□□ 0.4
TDP2-204ENST00000478507 CABP4P57796 275 aa17.56■□□□□ 0.4
TDP2-204ENST00000478507 RFC4P35249 363 aa17.55■□□□□ 0.4
TDP2-204ENST00000478507 MTHFSP49914 203 aa17.55■□□□□ 0.4
TDP2-204ENST00000478507 EIF4G2P78344 907 aaKnown RBP eCLIP17.55■□□□□ 0.4
TDP2-204ENST00000478507 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
TDP2-204ENST00000478507 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
TDP2-204ENST00000478507 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
TDP2-204ENST00000478507 USP42Q9H9J4 1324 aaKnown RBP17.53■□□□□ 0.4
TDP2-204ENST00000478507 PTCD1O75127 700 aaKnown RBP17.53■□□□□ 0.4
TDP2-204ENST00000478507 IL13P35225 146 aa17.53■□□□□ 0.4
TDP2-204ENST00000478507 NFATC2IPQ8NCF5 419 aa17.53■□□□□ 0.4
TDP2-204ENST00000478507 PARP3Q9Y6F1 533 aa17.53■□□□□ 0.4
TDP2-204ENST00000478507 MRC1P22897 1456 aa17.52■□□□□ 0.4
TDP2-204ENST00000478507 DDR1Q08345 913 aa17.52■□□□□ 0.4
TDP2-204ENST00000478507 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
TDP2-204ENST00000478507 SULT6B1Q6IMI4 303 aa17.52■□□□□ 0.4
TDP2-204ENST00000478507 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.4
TDP2-204ENST00000478507 FKBP8Q14318 412 aa17.51■□□□□ 0.39
TDP2-204ENST00000478507 INTS5Q6P9B9 1019 aaKnown RBP17.51■□□□□ 0.39
TDP2-204ENST00000478507 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
TDP2-204ENST00000478507 VIRMAQ69YN4 1812 aaKnown RBP17.51■□□□□ 0.39
TDP2-204ENST00000478507 FCHSD2O94868 740 aa17.5■□□□□ 0.39
TDP2-204ENST00000478507 ARHGAP27Q6ZUM4 889 aa17.5■□□□□ 0.39
TDP2-204ENST00000478507 TOMM70O94826 608 aa17.49■□□□□ 0.39
TDP2-204ENST00000478507 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
TDP2-204ENST00000478507 SBF1O95248 1867 aa17.48■□□□□ 0.39
TDP2-204ENST00000478507 NMRK2Q9NPI5 230 aa17.48■□□□□ 0.39
TDP2-204ENST00000478507 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
TDP2-204ENST00000478507 NRXN2Q9P2S2 1712 aa17.47■□□□□ 0.39
TDP2-204ENST00000478507 POLRMTO00411 1230 aaKnown RBP17.47■□□□□ 0.39
TDP2-204ENST00000478507 TM4SF1P30408 202 aa17.47■□□□□ 0.39
TDP2-204ENST00000478507 AKAP4Q5JQC9 854 aa17.47■□□□□ 0.39
TDP2-204ENST00000478507 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
TDP2-204ENST00000478507 SLC52A2Q9HAB3 445 aa17.47■□□□□ 0.39
TDP2-204ENST00000478507 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
TDP2-204ENST00000478507 APLP1P51693 650 aa17.46■□□□□ 0.39
TDP2-204ENST00000478507 C9orf131Q5VYM1 1079 aa17.46■□□□□ 0.39
TDP2-204ENST00000478507 DNAJC5GQ8N7S2 189 aa17.46■□□□□ 0.39
TDP2-204ENST00000478507 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
TDP2-204ENST00000478507 AFDNP55196 1824 aaKnown RBP17.46■□□□□ 0.39
TDP2-204ENST00000478507 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.38
TDP2-204ENST00000478507 DALRD3Q5D0E6 543 aaKnown RBP17.45■□□□□ 0.38
TDP2-204ENST00000478507 DNAJC10Q8IXB1 793 aa17.45■□□□□ 0.38
TDP2-204ENST00000478507 KNSTRNQ9Y448 316 aa17.45■□□□□ 0.38
TDP2-204ENST00000478507 UBR2Q8IWV8 1755 aa17.45■□□□□ 0.38
TDP2-204ENST00000478507 DLEC1Q9Y238 1755 aa17.44■□□□□ 0.38
TDP2-204ENST00000478507 CYP19A1P11511 503 aaPredicted RBP17.44■□□□□ 0.38
TDP2-204ENST00000478507 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
TDP2-204ENST00000478507 CHRNA5P30532 468 aa17.43■□□□□ 0.38
TDP2-204ENST00000478507 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms