RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 CABP4P57796 275 aa14.72□□□□□ -0.05
VANGL1-206ENST00000478369 AEBP1Q8IUX7 1158 aa14.72□□□□□ -0.05
VANGL1-206ENST00000478369 LINC00116Q8NCU8 138 aa14.72□□□□□ -0.05
VANGL1-206ENST00000478369 UBR3Q6ZT12 1888 aa14.72□□□□□ -0.05
VANGL1-206ENST00000478369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.71□□□□□ -0.05
VANGL1-206ENST00000478369 GPR162Q16538 588 aa14.71□□□□□ -0.05
VANGL1-206ENST00000478369 KLHL34Q8N239 644 aa14.71□□□□□ -0.05
VANGL1-206ENST00000478369 KDM6AO15550 1401 aaPredicted RBP14.71□□□□□ -0.05
VANGL1-206ENST00000478369 ITPK1Q13572 414 aa14.7□□□□□ -0.06
VANGL1-206ENST00000478369 CD2APQ9Y5K6 639 aa14.7□□□□□ -0.06
VANGL1-206ENST00000478369 PHF14O94880 888 aa14.69□□□□□ -0.06
VANGL1-206ENST00000478369 AKAP4Q5JQC9 854 aa14.69□□□□□ -0.06
VANGL1-206ENST00000478369 RC3H1Q5TC82 1133 aaKnown RBP14.69□□□□□ -0.06
VANGL1-206ENST00000478369 MSL1Q68DK7 614 aa14.69□□□□□ -0.06
VANGL1-206ENST00000478369 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
VANGL1-206ENST00000478369 GNPATO15228 680 aa14.68□□□□□ -0.06
VANGL1-206ENST00000478369 DIAPH1O60610 1272 aaKnown RBP14.68□□□□□ -0.06
VANGL1-206ENST00000478369 CC2D1BQ5T0F9 858 aaKnown RBP14.68□□□□□ -0.06
VANGL1-206ENST00000478369 AMIGO3Q86WK7 504 aa14.68□□□□□ -0.06
VANGL1-206ENST00000478369 NLGN2Q8NFZ4 835 aa14.68□□□□□ -0.06
VANGL1-206ENST00000478369 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
VANGL1-206ENST00000478369 CHD4Q14839 1912 aa14.68□□□□□ -0.06
VANGL1-206ENST00000478369 GRIN3BO60391 1043 aa14.67□□□□□ -0.06
VANGL1-206ENST00000478369 ADRA2BP18089 450 aa14.67□□□□□ -0.06
VANGL1-206ENST00000478369 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
VANGL1-206ENST00000478369 CNTNAP4Q9C0A0 1308 aa14.66□□□□□ -0.06
VANGL1-206ENST00000478369 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
VANGL1-206ENST00000478369 SLC4A9Q96Q91 983 aa14.66□□□□□ -0.06
VANGL1-206ENST00000478369 TRAPPC3LQ5T215 181 aa14.65□□□□□ -0.06
VANGL1-206ENST00000478369 RPS6KA4O75676 772 aa14.64□□□□□ -0.07
VANGL1-206ENST00000478369 HMOX1P09601 288 aa14.64□□□□□ -0.07
VANGL1-206ENST00000478369 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
VANGL1-206ENST00000478369 ZNF784Q8NCA9 323 aaPredicted RBP14.64□□□□□ -0.07
VANGL1-206ENST00000478369 SLC52A2Q9HAB3 445 aa14.64□□□□□ -0.07
VANGL1-206ENST00000478369 SCN11AQ9UI33 1791 aa14.64□□□□□ -0.07
VANGL1-206ENST00000478369 COL5A3P25940 1745 aaPredicted RBP14.63□□□□□ -0.07
VANGL1-206ENST00000478369 CICQ96RK0 1608 aaPredicted RBP14.63□□□□□ -0.07
VANGL1-206ENST00000478369 NLGN1Q8N2Q7 840 aa14.63□□□□□ -0.07
VANGL1-206ENST00000478369 RNMTO43148 476 aaKnown RBP14.62□□□□□ -0.07
VANGL1-206ENST00000478369 PTCD1O75127 700 aaKnown RBP14.62□□□□□ -0.07
VANGL1-206ENST00000478369 SMIM5Q71RC9 77 aa14.62□□□□□ -0.07
VANGL1-206ENST00000478369 COL3A1P02461 1466 aaPredicted RBP14.62□□□□□ -0.07
VANGL1-206ENST00000478369 MRC1P22897 1456 aa14.62□□□□□ -0.07
VANGL1-206ENST00000478369 YBX3P16989 372 aaKnown RBP eCLIP14.61□□□□□ -0.07
VANGL1-206ENST00000478369 RFC4P35249 363 aa14.61□□□□□ -0.07
VANGL1-206ENST00000478369 MTHFSDQ2M296 383 aaKnown RBP14.61□□□□□ -0.07
VANGL1-206ENST00000478369 ARHGEF1Q92888 912 aaKnown RBP14.61□□□□□ -0.07
VANGL1-206ENST00000478369 CRKLP46109 303 aaKnown RBP14.6□□□□□ -0.07
VANGL1-206ENST00000478369 CFAP53Q96M91 514 aa14.6□□□□□ -0.07
VANGL1-206ENST00000478369 LGR6Q9HBX8 967 aa14.6□□□□□ -0.07
VANGL1-206ENST00000478369 ADAMTS7Q9UKP4 1686 aa14.6□□□□□ -0.07
VANGL1-206ENST00000478369 MMP10P09238 476 aa14.59□□□□□ -0.07
VANGL1-206ENST00000478369 GAS2L2Q8NHY3 880 aa14.59□□□□□ -0.07
VANGL1-206ENST00000478369 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
VANGL1-206ENST00000478369 GYS1P13807 737 aa14.58□□□□□ -0.08
VANGL1-206ENST00000478369 VSIG10Q8N0Z9 540 aa14.58□□□□□ -0.08
VANGL1-206ENST00000478369 MYH14Q7Z406 1995 aaKnown RBP14.58□□□□□ -0.08
VANGL1-206ENST00000478369 TGFB2P61812 414 aa14.57□□□□□ -0.08
VANGL1-206ENST00000478369 NUDCQ9Y266 331 aa14.57□□□□□ -0.08
VANGL1-206ENST00000478369 TJP1Q07157 1748 aa14.57□□□□□ -0.08
VANGL1-206ENST00000478369 GNAT3A8MTJ3 354 aa14.56□□□□□ -0.08
VANGL1-206ENST00000478369 CNGB1Q14028 1251 aaPredicted RBP14.56□□□□□ -0.08
VANGL1-206ENST00000478369 INTS5Q6P9B9 1019 aaKnown RBP14.56□□□□□ -0.08
VANGL1-206ENST00000478369 CCDC87Q9NVE4 849 aa14.56□□□□□ -0.08
VANGL1-206ENST00000478369 PARP3Q9Y6F1 533 aa14.56□□□□□ -0.08
VANGL1-206ENST00000478369 VIRMAQ69YN4 1812 aaKnown RBP14.55□□□□□ -0.08
VANGL1-206ENST00000478369 KIF13BQ9NQT8 1826 aa14.55□□□□□ -0.08
VANGL1-206ENST00000478369 USP42Q9H9J4 1324 aaKnown RBP14.55□□□□□ -0.08
VANGL1-206ENST00000478369 KCPQ6ZWJ8 1503 aa14.55□□□□□ -0.08
VANGL1-206ENST00000478369 C4AP0C0L4 1744 aa14.55□□□□□ -0.08
VANGL1-206ENST00000478369 CYP19A1P11511 503 aaPredicted RBP14.54□□□□□ -0.08
VANGL1-206ENST00000478369 TEFQ10587 303 aa14.54□□□□□ -0.08
VANGL1-206ENST00000478369 SLC39A6Q13433 755 aa14.54□□□□□ -0.08
VANGL1-206ENST00000478369 DNAJC10Q8IXB1 793 aa14.54□□□□□ -0.08
VANGL1-206ENST00000478369 TTC5Q8N0Z6 440 aa14.54□□□□□ -0.08
VANGL1-206ENST00000478369 C10orf71Q711Q0 1435 aa14.54□□□□□ -0.08
VANGL1-206ENST00000478369 SOS1Q07889 1333 aaPredicted RBP14.53□□□□□ -0.08
VANGL1-206ENST00000478369 PPP2R1AP30153 589 aa14.53□□□□□ -0.08
VANGL1-206ENST00000478369 RSPH6AQ9H0K4 717 aa14.53□□□□□ -0.08
VANGL1-206ENST00000478369 PXDNLA1KZ92 1463 aa14.52□□□□□ -0.08
VANGL1-206ENST00000478369 CEMIPQ8WUJ3 1361 aa14.52□□□□□ -0.08
VANGL1-206ENST00000478369 ZPR1O75312 459 aa14.52□□□□□ -0.09
VANGL1-206ENST00000478369 FCHSD2O94868 740 aa14.52□□□□□ -0.09
VANGL1-206ENST00000478369 IL17REQ8NFR9 667 aa14.52□□□□□ -0.09
VANGL1-206ENST00000478369 TEX13AQ9BXU3 409 aaPredicted RBP14.52□□□□□ -0.09
VANGL1-206ENST00000478369 UBR2Q8IWV8 1755 aa14.52□□□□□ -0.09
VANGL1-206ENST00000478369 STARD3NLO95772 234 aa14.51□□□□□ -0.09
VANGL1-206ENST00000478369 PRKAR2BP31323 418 aa14.51□□□□□ -0.09
VANGL1-206ENST00000478369 FKBP8Q14318 412 aa14.51□□□□□ -0.09
VANGL1-206ENST00000478369 ZNF790Q6PG37 636 aa14.51□□□□□ -0.09
VANGL1-206ENST00000478369 SRP68Q9UHB9 627 aaKnown RBP14.51□□□□□ -0.09
VANGL1-206ENST00000478369 TM4SF1P30408 202 aa14.5□□□□□ -0.09
VANGL1-206ENST00000478369 NARFQ9UHQ1 456 aa14.5□□□□□ -0.09
VANGL1-206ENST00000478369 KIAA1551Q9HCM1 1747 aa14.49□□□□□ -0.09
VANGL1-206ENST00000478369 COL15A1P39059 1388 aa14.49□□□□□ -0.09
VANGL1-206ENST00000478369 A0A0G2JLW4 131 aa14.49□□□□□ -0.09
VANGL1-206ENST00000478369 GIGYF1O75420 1035 aaPredicted RBP14.49□□□□□ -0.09
VANGL1-206ENST00000478369 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
VANGL1-206ENST00000478369 C1QTNF8P60827 252 aa14.49□□□□□ -0.09
VANGL1-206ENST00000478369 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms