RNA–Protein interactions for RNA: ENST00000478116.1

TBRG4-208, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 2

Gene TBRG4, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-208ENST00000478116 ATP10DQ9P241 1426 aa23.5■■□□□ 1.35
TBRG4-208ENST00000478116 TNNT2P45379 298 aaPredicted RBP23.5■■□□□ 1.35
TBRG4-208ENST00000478116 IFNL2Q8IZJ0 200 aa23.5■■□□□ 1.35
TBRG4-208ENST00000478116 AMIGO3Q86WK7 504 aa23.48■■□□□ 1.35
TBRG4-208ENST00000478116 LINC00116Q8NCU8 138 aa23.48■■□□□ 1.35
TBRG4-208ENST00000478116 PHKG2P15735 406 aa23.47■■□□□ 1.35
TBRG4-208ENST00000478116 ATP6V1AP38606 617 aa23.47■■□□□ 1.35
TBRG4-208ENST00000478116 GPBP1L1Q9HC44 474 aaPredicted RBP23.47■■□□□ 1.35
TBRG4-208ENST00000478116 POLKQ9UBT6 870 aa23.47■■□□□ 1.35
TBRG4-208ENST00000478116 IGSF1Q8N6C5 1336 aa23.47■■□□□ 1.35
TBRG4-208ENST00000478116 GNPATO15228 680 aa23.46■■□□□ 1.35
TBRG4-208ENST00000478116 ASAP1Q9ULH1 1129 aa23.46■■□□□ 1.35
TBRG4-208ENST00000478116 PLEKHG2Q9H7P9 1386 aa23.45■■□□□ 1.34
TBRG4-208ENST00000478116 SMIM5Q71RC9 77 aa23.45■■□□□ 1.34
TBRG4-208ENST00000478116 ITPK1Q13572 414 aa23.43■■□□□ 1.34
TBRG4-208ENST00000478116 EIF4A2Q14240 407 aaKnown RBP23.42■■□□□ 1.34
TBRG4-208ENST00000478116 ADCY9O60503 1353 aa23.41■■□□□ 1.34
TBRG4-208ENST00000478116 ATG3Q9NT62 314 aa23.41■■□□□ 1.34
TBRG4-208ENST00000478116 WWC3Q9ULE0 1092 aa23.41■■□□□ 1.34
TBRG4-208ENST00000478116 HSP90AB1P08238 724 aaKnown RBP23.4■■□□□ 1.34
TBRG4-208ENST00000478116 ZNF526Q8TF50 670 aaPredicted RBP23.39■■□□□ 1.33
TBRG4-208ENST00000478116 RTCBQ9Y3I0 505 aaKnown RBP23.39■■□□□ 1.33
TBRG4-208ENST00000478116 ERVV-2B6SEH9 535 aa23.38■■□□□ 1.33
TBRG4-208ENST00000478116 MMP10P09238 476 aa23.38■■□□□ 1.33
TBRG4-208ENST00000478116 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
TBRG4-208ENST00000478116 PLEKHO1Q53GL0 409 aaPredicted RBP23.37■■□□□ 1.33
TBRG4-208ENST00000478116 DCAF5Q96JK2 942 aa23.37■■□□□ 1.33
TBRG4-208ENST00000478116 RBM42Q9BTD8 480 aaKnown RBP23.37■■□□□ 1.33
TBRG4-208ENST00000478116 NLGN1Q8N2Q7 840 aa23.36■■□□□ 1.33
TBRG4-208ENST00000478116 KDRP35968 1356 aa23.36■■□□□ 1.33
TBRG4-208ENST00000478116 ZNF831Q5JPB2 1677 aa23.35■■□□□ 1.33
TBRG4-208ENST00000478116 ADRA2BP18089 450 aa23.34■■□□□ 1.33
TBRG4-208ENST00000478116 RALBP1Q15311 655 aa23.34■■□□□ 1.33
TBRG4-208ENST00000478116 AMOTQ4VCS5 1084 aa23.34■■□□□ 1.33
TBRG4-208ENST00000478116 RC3H1Q5TC82 1133 aaKnown RBP23.34■■□□□ 1.33
TBRG4-208ENST00000478116 TGFB2P61812 414 aa23.33■■□□□ 1.33
TBRG4-208ENST00000478116 KIF13BQ9NQT8 1826 aa23.33■■□□□ 1.32
TBRG4-208ENST00000478116 CEP350Q5VT06 3117 aa23.33■■□□□ 1.32
TBRG4-208ENST00000478116 HSPA6P17066 643 aa23.32■■□□□ 1.32
TBRG4-208ENST00000478116 PPP2R1AP30153 589 aa23.32■■□□□ 1.32
TBRG4-208ENST00000478116 MTHFSP49914 203 aa23.32■■□□□ 1.32
TBRG4-208ENST00000478116 CABP4P57796 275 aa23.32■■□□□ 1.32
TBRG4-208ENST00000478116 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
TBRG4-208ENST00000478116 CICQ96RK0 1608 aaPredicted RBP23.32■■□□□ 1.32
TBRG4-208ENST00000478116 RFC4P35249 363 aa23.31■■□□□ 1.32
TBRG4-208ENST00000478116 PRKRIP1Q9H875 184 aaPredicted RBP23.31■■□□□ 1.32
TBRG4-208ENST00000478116 CCDC87Q9NVE4 849 aa23.31■■□□□ 1.32
TBRG4-208ENST00000478116 CNTNAP4Q9C0A0 1308 aa23.31■■□□□ 1.32
TBRG4-208ENST00000478116 COL5A3P25940 1745 aaPredicted RBP23.3■■□□□ 1.32
TBRG4-208ENST00000478116 PXDNLA1KZ92 1463 aa23.3■■□□□ 1.32
TBRG4-208ENST00000478116 C1orf141Q5JVX7 400 aa23.3■■□□□ 1.32
TBRG4-208ENST00000478116 ARHGEF1Q92888 912 aaKnown RBP23.3■■□□□ 1.32
TBRG4-208ENST00000478116 SLC4A9Q96Q91 983 aa23.3■■□□□ 1.32
TBRG4-208ENST00000478116 N4BP2Q86UW6 1770 aaPredicted RBP23.29■■□□□ 1.32
TBRG4-208ENST00000478116 RPS6KA4O75676 772 aa23.29■■□□□ 1.32
TBRG4-208ENST00000478116 BCS1LQ9Y276 419 aa23.29■■□□□ 1.32
TBRG4-208ENST00000478116 PARP3Q9Y6F1 533 aa23.29■■□□□ 1.32
TBRG4-208ENST00000478116 C10orf71Q711Q0 1435 aa23.28■■□□□ 1.32
TBRG4-208ENST00000478116 ANP32CO43423 234 aa23.28■■□□□ 1.32
TBRG4-208ENST00000478116 KDM6AO15550 1401 aaPredicted RBP23.27■■□□□ 1.32
TBRG4-208ENST00000478116 A0A0G2JLW4 131 aa23.27■■□□□ 1.32
TBRG4-208ENST00000478116 GYS1P13807 737 aa23.27■■□□□ 1.32
TBRG4-208ENST00000478116 C4AP0C0L4 1744 aa23.27■■□□□ 1.32
TBRG4-208ENST00000478116 KIAA1551Q9HCM1 1747 aa23.27■■□□□ 1.32
TBRG4-208ENST00000478116 MYBBP1AQ9BQG0 1328 aaKnown RBP23.27■■□□□ 1.32
TBRG4-208ENST00000478116 IFFO2Q5TF58 517 aa23.25■■□□□ 1.31
TBRG4-208ENST00000478116 MYH14Q7Z406 1995 aaKnown RBP23.24■■□□□ 1.31
TBRG4-208ENST00000478116 KIF3CO14782 793 aa23.24■■□□□ 1.31
TBRG4-208ENST00000478116 PTCD1O75127 700 aaKnown RBP23.24■■□□□ 1.31
TBRG4-208ENST00000478116 ARHGAP27Q6ZUM4 889 aa23.24■■□□□ 1.31
TBRG4-208ENST00000478116 FCHSD2O94868 740 aa23.23■■□□□ 1.31
TBRG4-208ENST00000478116 DPEP1P16444 411 aa23.23■■□□□ 1.31
TBRG4-208ENST00000478116 CFAP53Q96M91 514 aa23.23■■□□□ 1.31
TBRG4-208ENST00000478116 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
TBRG4-208ENST00000478116 COL3A1P02461 1466 aaPredicted RBP23.22■■□□□ 1.31
TBRG4-208ENST00000478116 CRKLP46109 303 aaKnown RBP23.21■■□□□ 1.31
TBRG4-208ENST00000478116 DIEXFQ68CQ4 756 aaKnown RBP23.21■■□□□ 1.31
TBRG4-208ENST00000478116 SULT6B1Q6IMI4 303 aa23.21■■□□□ 1.31
TBRG4-208ENST00000478116 NFATC2IPQ8NCF5 419 aa23.21■■□□□ 1.31
TBRG4-208ENST00000478116 BRCA1P38398 1863 aaKnown RBP23.19■■□□□ 1.3
TBRG4-208ENST00000478116 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
TBRG4-208ENST00000478116 PIM2Q9P1W9 311 aa23.18■■□□□ 1.3
TBRG4-208ENST00000478116 ARFGEF1Q9Y6D6 1849 aa23.17■■□□□ 1.3
TBRG4-208ENST00000478116 SCN11AQ9UI33 1791 aa23.17■■□□□ 1.3
TBRG4-208ENST00000478116 USP42Q9H9J4 1324 aaKnown RBP23.17■■□□□ 1.3
TBRG4-208ENST00000478116 TOMM70O94826 608 aa23.17■■□□□ 1.3
TBRG4-208ENST00000478116 IL13P35225 146 aa23.16■■□□□ 1.3
TBRG4-208ENST00000478116 APLP1P51693 650 aa23.16■■□□□ 1.3
TBRG4-208ENST00000478116 SRP68Q9UHB9 627 aaKnown RBP23.16■■□□□ 1.3
TBRG4-208ENST00000478116 TJP1Q07157 1748 aa23.16■■□□□ 1.3
TBRG4-208ENST00000478116 FKBP8Q14318 412 aa23.15■■□□□ 1.3
TBRG4-208ENST00000478116 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
TBRG4-208ENST00000478116 DALRD3Q5D0E6 543 aaKnown RBP23.14■■□□□ 1.29
TBRG4-208ENST00000478116 ZPR1O75312 459 aa23.13■■□□□ 1.29
TBRG4-208ENST00000478116 KCNA3P22001 575 aa23.13■■□□□ 1.29
TBRG4-208ENST00000478116 C9orf131Q5VYM1 1079 aa23.13■■□□□ 1.29
TBRG4-208ENST00000478116 U2SURPO15042 1029 aaKnown RBP23.12■■□□□ 1.29
TBRG4-208ENST00000478116 SLC52A2Q9HAB3 445 aa23.12■■□□□ 1.29
TBRG4-208ENST00000478116 DDR1Q08345 913 aa23.11■■□□□ 1.29
TBRG4-208ENST00000478116 INTS5Q6P9B9 1019 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms