RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
LMBR1-216ENST00000477983 NUCKS1Q9H1E3 243 aaKnown RBP9.74□□□□□ -0.85
LMBR1-216ENST00000477983 A0A1B0GTH6 734 aa9.73□□□□□ -0.85
LMBR1-216ENST00000477983 THBS1P07996 1170 aa9.73□□□□□ -0.85
LMBR1-216ENST00000477983 PPARGC1BQ86YN6 1023 aaKnown RBP9.73□□□□□ -0.85
LMBR1-216ENST00000477983 PLPP7Q8NBV4 271 aa9.73□□□□□ -0.85
LMBR1-216ENST00000477983 TRERF1Q96PN7 1200 aa9.73□□□□□ -0.85
LMBR1-216ENST00000477983 IGF1RP08069 1367 aa9.73□□□□□ -0.85
LMBR1-216ENST00000477983 RNF225M0QZC1 329 aaPredicted RBP9.72□□□□□ -0.85
LMBR1-216ENST00000477983 SCNN1DP51172 638 aa9.72□□□□□ -0.85
LMBR1-216ENST00000477983 C4orf17Q53FE4 359 aa9.72□□□□□ -0.85
LMBR1-216ENST00000477983 GNASQ5JWF2 1037 aa9.72□□□□□ -0.85
LMBR1-216ENST00000477983 TMEM214Q6NUQ4 689 aaKnown RBP9.72□□□□□ -0.85
LMBR1-216ENST00000477983 KCTD17Q8N5Z5 321 aa9.72□□□□□ -0.85
LMBR1-216ENST00000477983 CFHR5Q9BXR6 569 aa9.72□□□□□ -0.85
LMBR1-216ENST00000477983 STAU1O95793 577 aaKnown RBP9.71□□□□□ -0.86
LMBR1-216ENST00000477983 INHAP05111 366 aa9.71□□□□□ -0.86
LMBR1-216ENST00000477983 GTF2E1P29083 439 aaPredicted RBP9.71□□□□□ -0.86
LMBR1-216ENST00000477983 PHKA2P46019 1235 aa9.71□□□□□ -0.86
LMBR1-216ENST00000477983 LBRQ14739 615 aaKnown RBP9.71□□□□□ -0.86
LMBR1-216ENST00000477983 RHBDD1Q8TEB9 315 aa9.71□□□□□ -0.86
LMBR1-216ENST00000477983 ALG2Q9H553 416 aa9.71□□□□□ -0.86
LMBR1-216ENST00000477983 RASSF7Q02833 373 aa9.7□□□□□ -0.86
LMBR1-216ENST00000477983 UBAP2LQ14157 1087 aaKnown RBP9.7□□□□□ -0.86
LMBR1-216ENST00000477983 MAP3K10Q02779 954 aa9.69□□□□□ -0.86
LMBR1-216ENST00000477983 TMEM151AQ8N4L1 468 aa9.69□□□□□ -0.86
LMBR1-216ENST00000477983 LRRC4BQ9NT99 713 aa9.69□□□□□ -0.86
LMBR1-216ENST00000477983 LZTS3O60299 673 aaPredicted RBP9.68□□□□□ -0.86
LMBR1-216ENST00000477983 MX2P20592 715 aa9.68□□□□□ -0.86
LMBR1-216ENST00000477983 MSX1P28360 303 aa9.68□□□□□ -0.86
LMBR1-216ENST00000477983 GDF10P55107 478 aa9.68□□□□□ -0.86
LMBR1-216ENST00000477983 TLR1Q15399 786 aa9.68□□□□□ -0.86
LMBR1-216ENST00000477983 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
LMBR1-216ENST00000477983 GDF11O95390 407 aa9.67□□□□□ -0.86
LMBR1-216ENST00000477983 BCRP11274 1271 aa9.67□□□□□ -0.86
LMBR1-216ENST00000477983 MARSP56192 900 aaKnown RBP9.67□□□□□ -0.86
LMBR1-216ENST00000477983 ACDQ96AP0 544 aa9.67□□□□□ -0.86
LMBR1-216ENST00000477983 SCARF2Q96GP6 870 aaPredicted RBP9.67□□□□□ -0.86
LMBR1-216ENST00000477983 SLC4A9Q96Q91 983 aa9.67□□□□□ -0.86
LMBR1-216ENST00000477983 GPAMQ9HCL2 828 aa9.67□□□□□ -0.86
LMBR1-216ENST00000477983 PIK3CDO00329 1044 aa9.66□□□□□ -0.86
LMBR1-216ENST00000477983 SMTNP53814 917 aa9.66□□□□□ -0.86
LMBR1-216ENST00000477983 NFATC2IPQ8NCF5 419 aa9.66□□□□□ -0.86
LMBR1-216ENST00000477983 CRISPLD1Q9H336 500 aa9.66□□□□□ -0.86
LMBR1-216ENST00000477983 NSFL1CQ9UNZ2 370 aaKnown RBP9.66□□□□□ -0.86
LMBR1-216ENST00000477983 PHF24Q9UPV7 400 aa9.66□□□□□ -0.86
LMBR1-216ENST00000477983 PCDHGA11Q9Y5H2 935 aa9.66□□□□□ -0.86
LMBR1-216ENST00000477983 TMEM229AB2RXF0 380 aa9.65□□□□□ -0.86
LMBR1-216ENST00000477983 FLIIQ13045 1269 aa9.65□□□□□ -0.86
LMBR1-216ENST00000477983 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
LMBR1-216ENST00000477983 POM121Q96HA1 1249 aa9.65□□□□□ -0.86
LMBR1-216ENST00000477983 CSB-PGBD3P0DP91 1061 aa9.64□□□□□ -0.87
LMBR1-216ENST00000477983 MAP2K3P46734 347 aa9.64□□□□□ -0.87
LMBR1-216ENST00000477983 MTFR1Q15390 333 aa9.64□□□□□ -0.87
LMBR1-216ENST00000477983 KANK3Q6NY19 840 aa9.64□□□□□ -0.87
LMBR1-216ENST00000477983 ZNF295-AS1Q8N0V1 137 aa9.64□□□□□ -0.87
LMBR1-216ENST00000477983 PGBD3Q8N328 593 aa9.64□□□□□ -0.87
LMBR1-216ENST00000477983 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
LMBR1-216ENST00000477983 EFHC2Q5JST6 749 aa9.63□□□□□ -0.87
LMBR1-216ENST00000477983 C1orf216Q8TAB5 229 aa9.63□□□□□ -0.87
LMBR1-216ENST00000477983 NIFKQ9BYG3 293 aaKnown RBP9.63□□□□□ -0.87
LMBR1-216ENST00000477983 NDFIP2Q9NV92 336 aa9.63□□□□□ -0.87
LMBR1-216ENST00000477983 CDK2AP1O14519 115 aa9.62□□□□□ -0.87
LMBR1-216ENST00000477983 RAD21O60216 631 aa9.62□□□□□ -0.87
LMBR1-216ENST00000477983 SKIP12755 728 aa9.62□□□□□ -0.87
LMBR1-216ENST00000477983 IRS1P35568 1242 aa9.62□□□□□ -0.87
LMBR1-216ENST00000477983 EML3Q32P44 896 aa9.62□□□□□ -0.87
LMBR1-216ENST00000477983 IQSEC3Q9UPP2 1182 aaPredicted RBP9.62□□□□□ -0.87
LMBR1-216ENST00000477983 A6NJY4 79 aa9.61□□□□□ -0.87
LMBR1-216ENST00000477983 OIP5O43482 229 aa9.61□□□□□ -0.87
LMBR1-216ENST00000477983 KLRG1Q96E93 195 aa9.61□□□□□ -0.87
LMBR1-216ENST00000477983 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
LMBR1-216ENST00000477983 NOD1Q9Y239 953 aa9.61□□□□□ -0.87
LMBR1-216ENST00000477983 PLA2G4AP47712 749 aa9.6□□□□□ -0.87
LMBR1-216ENST00000477983 TBC1D9Q6ZT07 1266 aa9.6□□□□□ -0.87
LMBR1-216ENST00000477983 OXCT2Q9BYC2 517 aaPredicted RBP9.6□□□□□ -0.87
LMBR1-216ENST00000477983 SERTAD1Q9UHV2 236 aa9.6□□□□□ -0.87
LMBR1-216ENST00000477983 BNIP3LO60238 219 aa9.59□□□□□ -0.87
LMBR1-216ENST00000477983 ATP4AP20648 1035 aa9.59□□□□□ -0.87
LMBR1-216ENST00000477983 NLRP8Q86W28 1048 aa9.59□□□□□ -0.87
LMBR1-216ENST00000477983 DNAAF2Q9NVR5 837 aaKnown RBP9.59□□□□□ -0.87
LMBR1-216ENST00000477983 DNMT3AQ9Y6K1 912 aaPredicted RBP9.59□□□□□ -0.87
LMBR1-216ENST00000477983 BACH1O14867 736 aa9.58□□□□□ -0.88
LMBR1-216ENST00000477983 UBTFP17480 764 aaKnown RBP9.58□□□□□ -0.88
LMBR1-216ENST00000477983 NCOA4Q13772 614 aa9.58□□□□□ -0.88
LMBR1-216ENST00000477983 BEND7Q8N7W2 519 aaPredicted RBP9.58□□□□□ -0.88
LMBR1-216ENST00000477983 NEDD1Q8NHV4 660 aa9.58□□□□□ -0.88
LMBR1-216ENST00000477983 CNTNAP5Q8WYK1 1306 aa9.57□□□□□ -0.88
LMBR1-216ENST00000477983 PHF20L1A8MW92 1017 aa9.57□□□□□ -0.88
LMBR1-216ENST00000477983 C2CD2LO14523 706 aa9.57□□□□□ -0.88
LMBR1-216ENST00000477983 GTF2IP78347 998 aa9.57□□□□□ -0.88
LMBR1-216ENST00000477983 FIGNL1Q6PIW4 674 aa9.57□□□□□ -0.88
LMBR1-216ENST00000477983 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
LMBR1-216ENST00000477983 ZCCHC2Q9C0B9 1178 aaKnown RBP9.57□□□□□ -0.88
LMBR1-216ENST00000477983 ZDHHC3Q9NYG2 299 aa9.57□□□□□ -0.88
LMBR1-216ENST00000477983 GDF2Q9UK05 429 aaPredicted RBP9.57□□□□□ -0.88
LMBR1-216ENST00000477983 USP3Q9Y6I4 520 aa9.57□□□□□ -0.88
LMBR1-216ENST00000477983 POM121CA8CG34 1229 aa9.56□□□□□ -0.88
LMBR1-216ENST00000477983 C1orf229Q6ZS94 237 aaPredicted RBP9.56□□□□□ -0.88
LMBR1-216ENST00000477983 AIDAQ96BJ3 306 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms