RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ATG3Q9NT62 314 aa16.15■□□□□ 0.18
CPSF7-211ENST00000477890 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
CPSF7-211ENST00000477890 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
CPSF7-211ENST00000477890 PLEKHO1Q53GL0 409 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-211ENST00000477890 WWC3Q9ULE0 1092 aa16.12■□□□□ 0.17
CPSF7-211ENST00000477890 ERVV-2B6SEH9 535 aa16.11■□□□□ 0.17
CPSF7-211ENST00000477890 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
CPSF7-211ENST00000477890 MORC1Q86VD1 984 aa16.11■□□□□ 0.17
CPSF7-211ENST00000477890 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
CPSF7-211ENST00000477890 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
CPSF7-211ENST00000477890 KDRP35968 1356 aa16.11■□□□□ 0.17
CPSF7-211ENST00000477890 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
CPSF7-211ENST00000477890 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-211ENST00000477890 ZNF831Q5JPB2 1677 aa16.09■□□□□ 0.17
CPSF7-211ENST00000477890 SLC4A9Q96Q91 983 aa16.09■□□□□ 0.17
CPSF7-211ENST00000477890 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
CPSF7-211ENST00000477890 KDM6AO15550 1401 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-211ENST00000477890 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
CPSF7-211ENST00000477890 MMP10P09238 476 aa16.08■□□□□ 0.16
CPSF7-211ENST00000477890 CABP4P57796 275 aa16.08■□□□□ 0.16
CPSF7-211ENST00000477890 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.16
CPSF7-211ENST00000477890 TRAPPC3LQ5T215 181 aa16.08■□□□□ 0.16
CPSF7-211ENST00000477890 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.16
CPSF7-211ENST00000477890 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
CPSF7-211ENST00000477890 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
CPSF7-211ENST00000477890 KNSTRNQ9Y448 316 aa16.07■□□□□ 0.16
CPSF7-211ENST00000477890 MTHFSP49914 203 aa16.06■□□□□ 0.16
CPSF7-211ENST00000477890 GPBP1L1Q9HC44 474 aaPredicted RBP16.06■□□□□ 0.16
CPSF7-211ENST00000477890 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
CPSF7-211ENST00000477890 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-211ENST00000477890 ADCY9O60503 1353 aa16.05■□□□□ 0.16
CPSF7-211ENST00000477890 CNTNAP4Q9C0A0 1308 aa16.05■□□□□ 0.16
CPSF7-211ENST00000477890 RC3H1Q5TC82 1133 aaKnown RBP16.05■□□□□ 0.16
CPSF7-211ENST00000477890 SULT6B1Q6IMI4 303 aa16.05■□□□□ 0.16
CPSF7-211ENST00000477890 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-211ENST00000477890 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
CPSF7-211ENST00000477890 MYH14Q7Z406 1995 aaKnown RBP16.05■□□□□ 0.16
CPSF7-211ENST00000477890 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
CPSF7-211ENST00000477890 ADRA2BP18089 450 aa16.04■□□□□ 0.16
CPSF7-211ENST00000477890 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
CPSF7-211ENST00000477890 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
CPSF7-211ENST00000477890 C4AP0C0L4 1744 aa16.03■□□□□ 0.16
CPSF7-211ENST00000477890 KIAA1551Q9HCM1 1747 aa16.03■□□□□ 0.16
CPSF7-211ENST00000477890 PTCD1O75127 700 aaKnown RBP16.03■□□□□ 0.16
CPSF7-211ENST00000477890 RPS6KA4O75676 772 aa16.03■□□□□ 0.16
CPSF7-211ENST00000477890 RFC4P35249 363 aa16.03■□□□□ 0.16
CPSF7-211ENST00000477890 NFATC2IPQ8NCF5 419 aa16.03■□□□□ 0.16
CPSF7-211ENST00000477890 GYS1P13807 737 aa16.02■□□□□ 0.16
CPSF7-211ENST00000477890 IL13P35225 146 aa16.02■□□□□ 0.16
CPSF7-211ENST00000477890 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
CPSF7-211ENST00000477890 TGFB2P61812 414 aa16.01■□□□□ 0.15
CPSF7-211ENST00000477890 CCDC87Q9NVE4 849 aa16.01■□□□□ 0.15
CPSF7-211ENST00000477890 C10orf71Q711Q0 1435 aa16.01■□□□□ 0.15
CPSF7-211ENST00000477890 TJP1Q07157 1748 aa16■□□□□ 0.15
CPSF7-211ENST00000477890 A0A0G2JLW4 131 aa16■□□□□ 0.15
CPSF7-211ENST00000477890 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
CPSF7-211ENST00000477890 AMER1Q5JTC6 1135 aaPredicted RBP16■□□□□ 0.15
CPSF7-211ENST00000477890 BCS1LQ9Y276 419 aa16■□□□□ 0.15
CPSF7-211ENST00000477890 PARP3Q9Y6F1 533 aa16■□□□□ 0.15
CPSF7-211ENST00000477890 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
CPSF7-211ENST00000477890 VIRMAQ69YN4 1812 aaKnown RBP15.98■□□□□ 0.15
CPSF7-211ENST00000477890 KIF7Q2M1P5 1343 aa15.97■□□□□ 0.15
CPSF7-211ENST00000477890 BRCA1P38398 1863 aaKnown RBP15.97■□□□□ 0.15
CPSF7-211ENST00000477890 DPEP1P16444 411 aa15.97■□□□□ 0.15
CPSF7-211ENST00000477890 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
CPSF7-211ENST00000477890 HMOX1P09601 288 aa15.96■□□□□ 0.15
CPSF7-211ENST00000477890 LGR6Q9HBX8 967 aa15.96■□□□□ 0.15
CPSF7-211ENST00000477890 USP42Q9H9J4 1324 aaKnown RBP15.95■□□□□ 0.14
CPSF7-211ENST00000477890 FCHSD2O94868 740 aa15.95■□□□□ 0.14
CPSF7-211ENST00000477890 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
CPSF7-211ENST00000477890 SLC52A2Q9HAB3 445 aa15.95■□□□□ 0.14
CPSF7-211ENST00000477890 RNMTO43148 476 aaKnown RBP15.94■□□□□ 0.14
CPSF7-211ENST00000477890 FKBP8Q14318 412 aa15.94■□□□□ 0.14
CPSF7-211ENST00000477890 INTS5Q6P9B9 1019 aaKnown RBP15.94■□□□□ 0.14
CPSF7-211ENST00000477890 DNAJC10Q8IXB1 793 aa15.94■□□□□ 0.14
CPSF7-211ENST00000477890 ADAMTS7Q9UKP4 1686 aa15.93■□□□□ 0.14
CPSF7-211ENST00000477890 MRC1P22897 1456 aa15.93■□□□□ 0.14
CPSF7-211ENST00000477890 KIF3CO14782 793 aa15.93■□□□□ 0.14
CPSF7-211ENST00000477890 HSPA6P17066 643 aa15.93■□□□□ 0.14
CPSF7-211ENST00000477890 DDR1Q08345 913 aa15.93■□□□□ 0.14
CPSF7-211ENST00000477890 SLC39A6Q13433 755 aa15.93■□□□□ 0.14
CPSF7-211ENST00000477890 CC2D1BQ5T0F9 858 aaKnown RBP15.93■□□□□ 0.14
CPSF7-211ENST00000477890 ARFGEF1Q9Y6D6 1849 aa15.93■□□□□ 0.14
CPSF7-211ENST00000477890 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
CPSF7-211ENST00000477890 KCNA3P22001 575 aa15.92■□□□□ 0.14
CPSF7-211ENST00000477890 PER1O15534 1290 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-211ENST00000477890 ZPR1O75312 459 aa15.91■□□□□ 0.14
CPSF7-211ENST00000477890 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
CPSF7-211ENST00000477890 PIM2Q9P1W9 311 aa15.91■□□□□ 0.14
CPSF7-211ENST00000477890 SOS1Q07889 1333 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-211ENST00000477890 KCPQ6ZWJ8 1503 aa15.9■□□□□ 0.14
CPSF7-211ENST00000477890 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-211ENST00000477890 USPL1Q5W0Q7 1092 aa15.9■□□□□ 0.14
CPSF7-211ENST00000477890 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
CPSF7-211ENST00000477890 TM4SF1P30408 202 aa15.89■□□□□ 0.13
CPSF7-211ENST00000477890 CHRNA5P30532 468 aa15.89■□□□□ 0.13
CPSF7-211ENST00000477890 CNGB1Q14028 1251 aaPredicted RBP15.89■□□□□ 0.13
CPSF7-211ENST00000477890 DALRD3Q5D0E6 543 aaKnown RBP15.89■□□□□ 0.13
CPSF7-211ENST00000477890 CEP350Q5VT06 3117 aa15.89■□□□□ 0.13
CPSF7-211ENST00000477890 COL15A1P39059 1388 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms