RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 FBLN1P23142 703 aa13.84□□□□□ -0.19
SMARCB1-206ENST00000477836 SIK1P57059 783 aa13.84□□□□□ -0.19
SMARCB1-206ENST00000477836 FOXN1O15353 648 aa13.83□□□□□ -0.2
SMARCB1-206ENST00000477836 TMF1P82094 1093 aa13.83□□□□□ -0.2
SMARCB1-206ENST00000477836 NLGN1Q8N2Q7 840 aa13.83□□□□□ -0.2
SMARCB1-206ENST00000477836 PIGBQ92521 554 aa13.83□□□□□ -0.2
SMARCB1-206ENST00000477836 DCAF5Q96JK2 942 aa13.83□□□□□ -0.2
SMARCB1-206ENST00000477836 PIM2Q9P1W9 311 aa13.83□□□□□ -0.2
SMARCB1-206ENST00000477836 ITPK1Q13572 414 aa13.82□□□□□ -0.2
SMARCB1-206ENST00000477836 DALRD3Q5D0E6 543 aaKnown RBP13.82□□□□□ -0.2
SMARCB1-206ENST00000477836 SLC12A5Q9H2X9 1139 aa13.82□□□□□ -0.2
SMARCB1-206ENST00000477836 MAP2P11137 1827 aaKnown RBP13.82□□□□□ -0.2
SMARCB1-206ENST00000477836 C4AP0C0L4 1744 aa13.81□□□□□ -0.2
SMARCB1-206ENST00000477836 SBF1O95248 1867 aa13.81□□□□□ -0.2
SMARCB1-206ENST00000477836 CYP27B1O15528 508 aa13.81□□□□□ -0.2
SMARCB1-206ENST00000477836 VEGFAP15692 232 aaPredicted RBP13.81□□□□□ -0.2
SMARCB1-206ENST00000477836 ATP6V1AP38606 617 aa13.81□□□□□ -0.2
SMARCB1-206ENST00000477836 TRAPPC3LQ5T215 181 aa13.81□□□□□ -0.2
SMARCB1-206ENST00000477836 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
SMARCB1-206ENST00000477836 PARP3Q9Y6F1 533 aa13.81□□□□□ -0.2
SMARCB1-206ENST00000477836 COG3Q96JB2 828 aa13.8□□□□□ -0.2
SMARCB1-206ENST00000477836 PRDM10Q9NQV6 1147 aa13.8□□□□□ -0.2
SMARCB1-206ENST00000477836 A0A1W2PP64 1363 aa13.8□□□□□ -0.2
SMARCB1-206ENST00000477836 TERF2IPQ9NYB0 399 aa13.79□□□□□ -0.2
SMARCB1-206ENST00000477836 RTCBQ9Y3I0 505 aaKnown RBP13.79□□□□□ -0.2
SMARCB1-206ENST00000477836 ROCK2O75116 1388 aaKnown RBP13.79□□□□□ -0.2
SMARCB1-206ENST00000477836 GLTPD2A6NH11 291 aa13.78□□□□□ -0.2
SMARCB1-206ENST00000477836 ASAP1Q9ULH1 1129 aa13.78□□□□□ -0.2
SMARCB1-206ENST00000477836 SMG6Q86US8 1419 aaKnown RBP13.78□□□□□ -0.2
SMARCB1-206ENST00000477836 GYS1P13807 737 aa13.77□□□□□ -0.21
SMARCB1-206ENST00000477836 RASSF7Q02833 373 aa13.77□□□□□ -0.21
SMARCB1-206ENST00000477836 RRS1Q15050 365 aaKnown RBP13.77□□□□□ -0.21
SMARCB1-206ENST00000477836 ARHGEF1Q92888 912 aaKnown RBP13.77□□□□□ -0.21
SMARCB1-206ENST00000477836 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
SMARCB1-206ENST00000477836 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
SMARCB1-206ENST00000477836 RTL1A6NKG5 1358 aa13.76□□□□□ -0.21
SMARCB1-206ENST00000477836 RFC4P35249 363 aa13.76□□□□□ -0.21
SMARCB1-206ENST00000477836 CTCFP49711 727 aaPredicted RBP13.76□□□□□ -0.21
SMARCB1-206ENST00000477836 AIDAQ96BJ3 306 aa13.76□□□□□ -0.21
SMARCB1-206ENST00000477836 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
SMARCB1-206ENST00000477836 CHRNA5P30532 468 aa13.75□□□□□ -0.21
SMARCB1-206ENST00000477836 ABHD8Q96I13 439 aa13.75□□□□□ -0.21
SMARCB1-206ENST00000477836 MLLT1Q03111 559 aaPredicted RBP13.74□□□□□ -0.21
SMARCB1-206ENST00000477836 L3MBTL2Q969R5 705 aa13.74□□□□□ -0.21
SMARCB1-206ENST00000477836 ADRA2BP18089 450 aa13.73□□□□□ -0.21
SMARCB1-206ENST00000477836 LMNB1P20700 586 aa13.73□□□□□ -0.21
SMARCB1-206ENST00000477836 LBX1P52954 281 aa13.73□□□□□ -0.21
SMARCB1-206ENST00000477836 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
SMARCB1-206ENST00000477836 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
SMARCB1-206ENST00000477836 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
SMARCB1-206ENST00000477836 CNTNAP1P78357 1384 aa13.72□□□□□ -0.21
SMARCB1-206ENST00000477836 POTECB2RU33 542 aa13.72□□□□□ -0.21
SMARCB1-206ENST00000477836 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
SMARCB1-206ENST00000477836 TIAM2Q8IVF5 1701 aa13.71□□□□□ -0.21
SMARCB1-206ENST00000477836 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
SMARCB1-206ENST00000477836 CCDC85CA6NKD9 419 aa13.7□□□□□ -0.22
SMARCB1-206ENST00000477836 RPS6KA4O75676 772 aa13.7□□□□□ -0.22
SMARCB1-206ENST00000477836 DDR1Q08345 913 aa13.7□□□□□ -0.22
SMARCB1-206ENST00000477836 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
SMARCB1-206ENST00000477836 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
SMARCB1-206ENST00000477836 SPG7Q9UQ90 795 aa13.7□□□□□ -0.22
SMARCB1-206ENST00000477836 INSRP06213 1382 aa13.7□□□□□ -0.22
SMARCB1-206ENST00000477836 VEGFBP49765 207 aa13.69□□□□□ -0.22
SMARCB1-206ENST00000477836 RC3H1Q5TC82 1133 aaKnown RBP13.69□□□□□ -0.22
SMARCB1-206ENST00000477836 SLC4A9Q96Q91 983 aa13.69□□□□□ -0.22
SMARCB1-206ENST00000477836 KDRP35968 1356 aa13.69□□□□□ -0.22
SMARCB1-206ENST00000477836 CNTNAP4Q9C0A0 1308 aa13.68□□□□□ -0.22
SMARCB1-206ENST00000477836 CCDC88AQ3V6T2 1871 aa13.68□□□□□ -0.22
SMARCB1-206ENST00000477836 FKBP8Q14318 412 aa13.68□□□□□ -0.22
SMARCB1-206ENST00000477836 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
SMARCB1-206ENST00000477836 WBP1LQ9NX94 342 aa13.68□□□□□ -0.22
SMARCB1-206ENST00000477836 SRP68Q9UHB9 627 aaKnown RBP13.68□□□□□ -0.22
SMARCB1-206ENST00000477836 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
SMARCB1-206ENST00000477836 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
SMARCB1-206ENST00000477836 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
SMARCB1-206ENST00000477836 HSPA8P11142 646 aaKnown RBP13.67□□□□□ -0.22
SMARCB1-206ENST00000477836 RGS19P49795 217 aa13.67□□□□□ -0.22
SMARCB1-206ENST00000477836 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
SMARCB1-206ENST00000477836 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
SMARCB1-206ENST00000477836 FLT4P35916 1363 aa13.66□□□□□ -0.22
SMARCB1-206ENST00000477836 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
SMARCB1-206ENST00000477836 PHKG2P15735 406 aa13.65□□□□□ -0.22
SMARCB1-206ENST00000477836 ZNF831Q5JPB2 1677 aa13.65□□□□□ -0.22
SMARCB1-206ENST00000477836 USP42Q9H9J4 1324 aaKnown RBP13.64□□□□□ -0.23
SMARCB1-206ENST00000477836 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
SMARCB1-206ENST00000477836 MYH14Q7Z406 1995 aaKnown RBP13.64□□□□□ -0.23
SMARCB1-206ENST00000477836 NFKBIEO00221 500 aa13.64□□□□□ -0.23
SMARCB1-206ENST00000477836 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
SMARCB1-206ENST00000477836 TMEM88BA6NKF7 163 aa13.63□□□□□ -0.23
SMARCB1-206ENST00000477836 FYB1O15117 783 aa13.63□□□□□ -0.23
SMARCB1-206ENST00000477836 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
SMARCB1-206ENST00000477836 PASKQ96RG2 1323 aa13.63□□□□□ -0.23
SMARCB1-206ENST00000477836 TM4SF1P30408 202 aa13.62□□□□□ -0.23
SMARCB1-206ENST00000477836 TTLL6Q8N841 843 aa13.62□□□□□ -0.23
SMARCB1-206ENST00000477836 CFAP44Q96MT7 982 aa13.62□□□□□ -0.23
SMARCB1-206ENST00000477836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCB1-206ENST00000477836 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
SMARCB1-206ENST00000477836 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
SMARCB1-206ENST00000477836 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
SMARCB1-206ENST00000477836 KIF24Q5T7B8 1368 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms