RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SBF2Q86WG5 1849 aa15.62■□□□□ 0.09
PRPF39-203ENST00000477626 TAF7Q15545 349 aaPredicted RBP15.61■□□□□ 0.09
PRPF39-203ENST00000477626 CARD10Q9BWT7 1032 aa15.61■□□□□ 0.09
PRPF39-203ENST00000477626 HOXB7P09629 217 aa15.61■□□□□ 0.09
PRPF39-203ENST00000477626 DZIP1LQ8IYY4 767 aaKnown RBP15.61■□□□□ 0.09
PRPF39-203ENST00000477626 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
PRPF39-203ENST00000477626 SMC4Q9NTJ3 1288 aa15.61■□□□□ 0.09
PRPF39-203ENST00000477626 MIS18AQ9NYP9 233 aa15.61■□□□□ 0.09
PRPF39-203ENST00000477626 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
PRPF39-203ENST00000477626 CHRNA2Q15822 529 aa15.61■□□□□ 0.09
PRPF39-203ENST00000477626 ANKRD36CQ5JPF3 1778 aa15.6■□□□□ 0.09
PRPF39-203ENST00000477626 AFDNP55196 1824 aaKnown RBP15.6■□□□□ 0.09
PRPF39-203ENST00000477626 CASZ1Q86V15 1759 aa15.59■□□□□ 0.09
PRPF39-203ENST00000477626 HDAC1Q13547 482 aaPredicted RBP15.59■□□□□ 0.09
PRPF39-203ENST00000477626 CENPQQ7L2Z9 268 aaPredicted RBP15.59■□□□□ 0.09
PRPF39-203ENST00000477626 PTPRCP08575 1304 aa15.59■□□□□ 0.09
PRPF39-203ENST00000477626 KCNQ3O43525 872 aa15.59■□□□□ 0.09
PRPF39-203ENST00000477626 PLEKHO1Q53GL0 409 aaPredicted RBP15.58■□□□□ 0.08
PRPF39-203ENST00000477626 SIRT2Q8IXJ6 389 aa15.58■□□□□ 0.08
PRPF39-203ENST00000477626 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
PRPF39-203ENST00000477626 NEFMP07197 916 aa15.58■□□□□ 0.08
PRPF39-203ENST00000477626 BCL9LQ86UU0 1499 aa15.58■□□□□ 0.08
PRPF39-203ENST00000477626 PDIA6Q15084 440 aa15.57■□□□□ 0.08
PRPF39-203ENST00000477626 G2E3Q7L622 706 aa15.56■□□□□ 0.08
PRPF39-203ENST00000477626 NHSQ6T4R5 1651 aa15.56■□□□□ 0.08
PRPF39-203ENST00000477626 BCORQ6W2J9 1755 aa15.56■□□□□ 0.08
PRPF39-203ENST00000477626 LY75O60449 1722 aa15.55■□□□□ 0.08
PRPF39-203ENST00000477626 ZNF530Q6P9A1 599 aaPredicted RBP15.55■□□□□ 0.08
PRPF39-203ENST00000477626 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
PRPF39-203ENST00000477626 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
PRPF39-203ENST00000477626 SKAP1Q86WV1 359 aa15.55■□□□□ 0.08
PRPF39-203ENST00000477626 ADCY9O60503 1353 aa15.55■□□□□ 0.08
PRPF39-203ENST00000477626 LARP1Q6PKG0 1096 aaKnown RBP15.55■□□□□ 0.08
PRPF39-203ENST00000477626 MPRIPQ6WCQ1 1025 aa15.54■□□□□ 0.08
PRPF39-203ENST00000477626 FRAT1Q92837 279 aaPredicted RBP15.54■□□□□ 0.08
PRPF39-203ENST00000477626 GIGYF1O75420 1035 aaPredicted RBP15.53■□□□□ 0.08
PRPF39-203ENST00000477626 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
PRPF39-203ENST00000477626 SMC5Q8IY18 1101 aa15.53■□□□□ 0.08
PRPF39-203ENST00000477626 DDX19BQ9UMR2 479 aa15.53■□□□□ 0.08
PRPF39-203ENST00000477626 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.08
PRPF39-203ENST00000477626 TAF1LQ8IZX4 1826 aa15.52■□□□□ 0.07
PRPF39-203ENST00000477626 MS4A1P11836 297 aa15.51■□□□□ 0.07
PRPF39-203ENST00000477626 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
PRPF39-203ENST00000477626 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
PRPF39-203ENST00000477626 IPO8O15397 1037 aaKnown RBP15.5■□□□□ 0.07
PRPF39-203ENST00000477626 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
PRPF39-203ENST00000477626 PCDH11XQ9BZA7 1347 aa15.5■□□□□ 0.07
PRPF39-203ENST00000477626 PCDH11YQ9BZA8 1340 aa15.5■□□□□ 0.07
PRPF39-203ENST00000477626 LAMB2P55268 1798 aa15.5■□□□□ 0.07
PRPF39-203ENST00000477626 ELL2O00472 640 aaPredicted RBP15.5■□□□□ 0.07
PRPF39-203ENST00000477626 PRAMEF22A3QJZ6 481 aa15.5■□□□□ 0.07
PRPF39-203ENST00000477626 BCL9O00512 1426 aa15.5■□□□□ 0.07
PRPF39-203ENST00000477626 IFNL2Q8IZJ0 200 aa15.49■□□□□ 0.07
PRPF39-203ENST00000477626 PRDM11Q9NQV5 511 aa15.49■□□□□ 0.07
PRPF39-203ENST00000477626 SPATA31A1Q5TZJ5 1347 aa15.48■□□□□ 0.07
PRPF39-203ENST00000477626 API5Q9BZZ5 524 aaKnown RBP15.48■□□□□ 0.07
PRPF39-203ENST00000477626 SPG7Q9UQ90 795 aa15.48■□□□□ 0.07
PRPF39-203ENST00000477626 EP400Q96L91 3159 aa15.48■□□□□ 0.07
PRPF39-203ENST00000477626 TATP17735 454 aaPredicted RBP15.48■□□□□ 0.07
PRPF39-203ENST00000477626 MYH14Q7Z406 1995 aaKnown RBP15.47■□□□□ 0.07
PRPF39-203ENST00000477626 NLRP2Q9NX02 1062 aa15.47■□□□□ 0.07
PRPF39-203ENST00000477626 BTBD11A6QL63 1104 aa15.47■□□□□ 0.07
PRPF39-203ENST00000477626 C8orf34Q49A92 452 aa15.47■□□□□ 0.07
PRPF39-203ENST00000477626 ZNF790Q6PG37 636 aa15.47■□□□□ 0.07
PRPF39-203ENST00000477626 BTAF1O14981 1849 aa15.47■□□□□ 0.07
PRPF39-203ENST00000477626 NUP98P52948 1817 aa15.47■□□□□ 0.07
PRPF39-203ENST00000477626 BRWD3Q6RI45 1802 aa15.47■□□□□ 0.07
PRPF39-203ENST00000477626 UTYO14607 1347 aa15.46■□□□□ 0.07
PRPF39-203ENST00000477626 TOM1O60784 492 aa15.46■□□□□ 0.07
PRPF39-203ENST00000477626 PDE4AP27815 886 aa15.46■□□□□ 0.07
PRPF39-203ENST00000477626 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
PRPF39-203ENST00000477626 TCERG1O14776 1098 aaKnown RBP15.46■□□□□ 0.07
PRPF39-203ENST00000477626 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
PRPF39-203ENST00000477626 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
PRPF39-203ENST00000477626 IL2RBP14784 551 aa15.46■□□□□ 0.07
PRPF39-203ENST00000477626 SPATA31A5Q5VU36 1347 aa15.46■□□□□ 0.06
PRPF39-203ENST00000477626 SPATA31A7Q8IWB4 1347 aa15.46■□□□□ 0.06
PRPF39-203ENST00000477626 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.06
PRPF39-203ENST00000477626 FLIIQ13045 1269 aa15.46■□□□□ 0.06
PRPF39-203ENST00000477626 PROSER3Q2NL68 480 aa15.45■□□□□ 0.06
PRPF39-203ENST00000477626 COL15A1P39059 1388 aa15.45■□□□□ 0.06
PRPF39-203ENST00000477626 UBAP1LF5GYI3 381 aa15.45■□□□□ 0.06
PRPF39-203ENST00000477626 PIP4K2BP78356 416 aa15.45■□□□□ 0.06
PRPF39-203ENST00000477626 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
PRPF39-203ENST00000477626 CCDC30Q5VVM6 783 aa15.44■□□□□ 0.06
PRPF39-203ENST00000477626 RAPGEF4Q8WZA2 1011 aa15.44■□□□□ 0.06
PRPF39-203ENST00000477626 A0A1B0GUL6 1792 aa15.44■□□□□ 0.06
PRPF39-203ENST00000477626 PHAXQ9H814 394 aaKnown RBP15.44■□□□□ 0.06
PRPF39-203ENST00000477626 C1orf141Q5JVX7 400 aa15.44■□□□□ 0.06
PRPF39-203ENST00000477626 ZCRB1Q8TBF4 217 aaKnown RBP15.44■□□□□ 0.06
PRPF39-203ENST00000477626 RBM19Q9Y4C8 960 aaKnown RBP15.44■□□□□ 0.06
PRPF39-203ENST00000477626 SCN7AQ01118 1682 aa15.43■□□□□ 0.06
PRPF39-203ENST00000477626 NFATC2IPQ8NCF5 419 aa15.43■□□□□ 0.06
PRPF39-203ENST00000477626 BACH2Q9BYV9 841 aa15.43■□□□□ 0.06
PRPF39-203ENST00000477626 NUCB1Q02818 461 aa15.43■□□□□ 0.06
PRPF39-203ENST00000477626 BEND3Q5T5X7 828 aa15.43■□□□□ 0.06
PRPF39-203ENST00000477626 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
PRPF39-203ENST00000477626 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
PRPF39-203ENST00000477626 BARGINQ6ZT62 677 aa15.42■□□□□ 0.06
PRPF39-203ENST00000477626 ITPRIPQ8IWB1 547 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms