RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 FOXN1O15353 648 aa13.77□□□□□ -0.21
COL4A5-204ENST00000477429 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
COL4A5-204ENST00000477429 AK7Q96M32 723 aa13.77□□□□□ -0.21
COL4A5-204ENST00000477429 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
COL4A5-204ENST00000477429 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
COL4A5-204ENST00000477429 PXDNLA1KZ92 1463 aa13.76□□□□□ -0.21
COL4A5-204ENST00000477429 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
COL4A5-204ENST00000477429 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
COL4A5-204ENST00000477429 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
COL4A5-204ENST00000477429 SIK1P57059 783 aa13.75□□□□□ -0.21
COL4A5-204ENST00000477429 FSTL1Q12841 308 aa13.75□□□□□ -0.21
COL4A5-204ENST00000477429 SLC4A9Q96Q91 983 aa13.75□□□□□ -0.21
COL4A5-204ENST00000477429 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
COL4A5-204ENST00000477429 CICQ96RK0 1608 aaPredicted RBP13.75□□□□□ -0.21
COL4A5-204ENST00000477429 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
COL4A5-204ENST00000477429 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
COL4A5-204ENST00000477429 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
COL4A5-204ENST00000477429 FLT4P35916 1363 aa13.73□□□□□ -0.21
COL4A5-204ENST00000477429 A0A0G2JLW4 131 aa13.73□□□□□ -0.21
COL4A5-204ENST00000477429 GNPATO15228 680 aa13.73□□□□□ -0.21
COL4A5-204ENST00000477429 MMP10P09238 476 aa13.73□□□□□ -0.21
COL4A5-204ENST00000477429 TONSLQ96HA7 1378 aa13.72□□□□□ -0.21
COL4A5-204ENST00000477429 SSFA2P28290 1259 aa13.72□□□□□ -0.21
COL4A5-204ENST00000477429 SMARCC1Q92922 1105 aaPredicted RBP13.72□□□□□ -0.21
COL4A5-204ENST00000477429 EYA1Q99502 592 aa13.72□□□□□ -0.21
COL4A5-204ENST00000477429 ATG3Q9NT62 314 aa13.72□□□□□ -0.21
COL4A5-204ENST00000477429 N4BP2Q86UW6 1770 aaPredicted RBP13.72□□□□□ -0.21
COL4A5-204ENST00000477429 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.22
COL4A5-204ENST00000477429 KIF20BQ96Q89 1820 aa13.71□□□□□ -0.22
COL4A5-204ENST00000477429 KDRP35968 1356 aa13.71□□□□□ -0.22
COL4A5-204ENST00000477429 KIF13BQ9NQT8 1826 aa13.7□□□□□ -0.22
COL4A5-204ENST00000477429 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
COL4A5-204ENST00000477429 CCDC85CA6NKD9 419 aa13.69□□□□□ -0.22
COL4A5-204ENST00000477429 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
COL4A5-204ENST00000477429 PHKG2P15735 406 aa13.69□□□□□ -0.22
COL4A5-204ENST00000477429 DPEP1P16444 411 aa13.69□□□□□ -0.22
COL4A5-204ENST00000477429 KCNA3P22001 575 aa13.69□□□□□ -0.22
COL4A5-204ENST00000477429 BCS1LQ9Y276 419 aa13.69□□□□□ -0.22
COL4A5-204ENST00000477429 C10orf71Q711Q0 1435 aa13.69□□□□□ -0.22
COL4A5-204ENST00000477429 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
COL4A5-204ENST00000477429 KIF24Q5T7B8 1368 aa13.68□□□□□ -0.22
COL4A5-204ENST00000477429 GYS1P13807 737 aa13.67□□□□□ -0.22
COL4A5-204ENST00000477429 ARHGEF1Q92888 912 aaKnown RBP13.67□□□□□ -0.22
COL4A5-204ENST00000477429 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
COL4A5-204ENST00000477429 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
COL4A5-204ENST00000477429 TMF1P82094 1093 aa13.66□□□□□ -0.22
COL4A5-204ENST00000477429 ARHGAP27Q6ZUM4 889 aa13.66□□□□□ -0.22
COL4A5-204ENST00000477429 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
COL4A5-204ENST00000477429 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
COL4A5-204ENST00000477429 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
COL4A5-204ENST00000477429 BRCA1P38398 1863 aaKnown RBP13.64□□□□□ -0.23
COL4A5-204ENST00000477429 TGFB2P61812 414 aa13.64□□□□□ -0.23
COL4A5-204ENST00000477429 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
COL4A5-204ENST00000477429 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
COL4A5-204ENST00000477429 C4AP0C0L4 1744 aa13.64□□□□□ -0.23
COL4A5-204ENST00000477429 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
COL4A5-204ENST00000477429 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
COL4A5-204ENST00000477429 FCHSD2O94868 740 aa13.63□□□□□ -0.23
COL4A5-204ENST00000477429 DDR1Q08345 913 aa13.63□□□□□ -0.23
COL4A5-204ENST00000477429 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
COL4A5-204ENST00000477429 TRAPPC3LQ5T215 181 aa13.63□□□□□ -0.23
COL4A5-204ENST00000477429 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
COL4A5-204ENST00000477429 IFNL2Q8IZJ0 200 aa13.63□□□□□ -0.23
COL4A5-204ENST00000477429 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
COL4A5-204ENST00000477429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL4A5-204ENST00000477429 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
COL4A5-204ENST00000477429 LBX1P52954 281 aa13.62□□□□□ -0.23
COL4A5-204ENST00000477429 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
COL4A5-204ENST00000477429 KCPQ6ZWJ8 1503 aa13.62□□□□□ -0.23
COL4A5-204ENST00000477429 CHRNA5P30532 468 aa13.61□□□□□ -0.23
COL4A5-204ENST00000477429 TNNT2P45379 298 aaPredicted RBP13.61□□□□□ -0.23
COL4A5-204ENST00000477429 FKBP8Q14318 412 aa13.61□□□□□ -0.23
COL4A5-204ENST00000477429 NLGN1Q8N2Q7 840 aa13.61□□□□□ -0.23
COL4A5-204ENST00000477429 RPS6KA4O75676 772 aa13.6□□□□□ -0.23
COL4A5-204ENST00000477429 CTCFP49711 727 aaPredicted RBP13.6□□□□□ -0.23
COL4A5-204ENST00000477429 RC3H1Q5TC82 1133 aaKnown RBP13.6□□□□□ -0.23
COL4A5-204ENST00000477429 CNTNAP4Q9C0A0 1308 aa13.6□□□□□ -0.23
COL4A5-204ENST00000477429 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
COL4A5-204ENST00000477429 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
COL4A5-204ENST00000477429 DCAF5Q96JK2 942 aa13.59□□□□□ -0.23
COL4A5-204ENST00000477429 CCDC87Q9NVE4 849 aa13.59□□□□□ -0.23
COL4A5-204ENST00000477429 ADAMTS7Q9UKP4 1686 aa13.59□□□□□ -0.23
COL4A5-204ENST00000477429 PTCD1O75127 700 aaKnown RBP13.58□□□□□ -0.24
COL4A5-204ENST00000477429 CRKLP46109 303 aaKnown RBP13.58□□□□□ -0.24
COL4A5-204ENST00000477429 RRAGCQ9HB90 399 aa13.58□□□□□ -0.24
COL4A5-204ENST00000477429 MKRN1Q9UHC7 482 aaKnown RBP13.58□□□□□ -0.24
COL4A5-204ENST00000477429 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.24
COL4A5-204ENST00000477429 ERVV-2B6SEH9 535 aa13.57□□□□□ -0.24
COL4A5-204ENST00000477429 SLC24A1O60721 1099 aa13.57□□□□□ -0.24
COL4A5-204ENST00000477429 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
COL4A5-204ENST00000477429 RFC4P35249 363 aa13.57□□□□□ -0.24
COL4A5-204ENST00000477429 RASSF7Q02833 373 aa13.57□□□□□ -0.24
COL4A5-204ENST00000477429 RNF181Q9P0P0 153 aa13.57□□□□□ -0.24
COL4A5-204ENST00000477429 PARP3Q9Y6F1 533 aa13.57□□□□□ -0.24
COL4A5-204ENST00000477429 TJP1Q07157 1748 aa13.56□□□□□ -0.24
COL4A5-204ENST00000477429 ARFGEF1Q9Y6D6 1849 aa13.56□□□□□ -0.24
COL4A5-204ENST00000477429 INTS5Q6P9B9 1019 aaKnown RBP13.56□□□□□ -0.24
COL4A5-204ENST00000477429 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
COL4A5-204ENST00000477429 USP42Q9H9J4 1324 aaKnown RBP13.56□□□□□ -0.24
COL4A5-204ENST00000477429 POLRMTO00411 1230 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms