RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 PRAMEF22A3QJZ6 481 aa8.38□□□□□ -1.07
CCDC30-209ENST00000477155 PHAXQ9H814 394 aaKnown RBP8.38□□□□□ -1.07
CCDC30-209ENST00000477155 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
CCDC30-209ENST00000477155 PDZRN3Q9UPQ7 1066 aa8.38□□□□□ -1.07
CCDC30-209ENST00000477155 FLIIQ13045 1269 aa8.38□□□□□ -1.07
CCDC30-209ENST00000477155 COL18A1P39060 1754 aa8.38□□□□□ -1.07
CCDC30-209ENST00000477155 NCAPD2Q15021 1401 aa8.38□□□□□ -1.07
CCDC30-209ENST00000477155 ADAMTS2O95450 1211 aa8.38□□□□□ -1.07
CCDC30-209ENST00000477155 PTPRCP08575 1304 aa8.37□□□□□ -1.07
CCDC30-209ENST00000477155 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-209ENST00000477155 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-209ENST00000477155 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
CCDC30-209ENST00000477155 CHPF2Q9P2E5 772 aa8.37□□□□□ -1.07
CCDC30-209ENST00000477155 INTS3Q68E01 1043 aaKnown RBP8.36□□□□□ -1.07
CCDC30-209ENST00000477155 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
CCDC30-209ENST00000477155 ZCRB1Q8TBF4 217 aaKnown RBP8.36□□□□□ -1.07
CCDC30-209ENST00000477155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC30-209ENST00000477155 MEIS3Q99687 375 aa8.36□□□□□ -1.07
CCDC30-209ENST00000477155 SLC52A2Q9HAB3 445 aa8.36□□□□□ -1.07
CCDC30-209ENST00000477155 IL2RBP14784 551 aa8.36□□□□□ -1.07
CCDC30-209ENST00000477155 HDAC1Q13547 482 aaPredicted RBP8.36□□□□□ -1.07
CCDC30-209ENST00000477155 BACH2Q9BYV9 841 aa8.36□□□□□ -1.07
CCDC30-209ENST00000477155 CHMP4BQ9H444 224 aaKnown RBP8.36□□□□□ -1.07
CCDC30-209ENST00000477155 GIGYF1O75420 1035 aaPredicted RBP8.35□□□□□ -1.07
CCDC30-209ENST00000477155 CABP4P57796 275 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 ZNF790Q6PG37 636 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 CARD10Q9BWT7 1032 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 SIRT2Q8IXJ6 389 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 RGS12O14924 1447 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 COL5A2P05997 1499 aaPredicted RBP8.35□□□□□ -1.07
CCDC30-209ENST00000477155 TOM1O60784 492 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 CRYBG1Q9Y4K1 1723 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 LRRC37A3O60309 1634 aa8.35□□□□□ -1.07
CCDC30-209ENST00000477155 KDM6AO15550 1401 aaPredicted RBP8.34□□□□□ -1.07
CCDC30-209ENST00000477155 UBAP1LF5GYI3 381 aa8.34□□□□□ -1.07
CCDC30-209ENST00000477155 ROBO1Q9Y6N7 1651 aa8.34□□□□□ -1.07
CCDC30-209ENST00000477155 LTBP4Q8N2S1 1624 aa8.34□□□□□ -1.07
CCDC30-209ENST00000477155 PROSER3Q2NL68 480 aa8.34□□□□□ -1.07
CCDC30-209ENST00000477155 ZNF496Q96IT1 587 aaPredicted RBP8.34□□□□□ -1.07
CCDC30-209ENST00000477155 LNPKQ9C0E8 428 aa8.34□□□□□ -1.07
CCDC30-209ENST00000477155 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
CCDC30-209ENST00000477155 AIMP1Q12904 312 aaKnown RBP8.34□□□□□ -1.07
CCDC30-209ENST00000477155 ANKRD45Q5TZF3 282 aa8.34□□□□□ -1.07
CCDC30-209ENST00000477155 TTC5Q8N0Z6 440 aa8.34□□□□□ -1.07
CCDC30-209ENST00000477155 LMO7Q8WWI1 1683 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 PI4KAP2A4QPH2 592 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 APBB1O00213 710 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 CCT4P50991 539 aaKnown RBP8.33□□□□□ -1.08
CCDC30-209ENST00000477155 SMC5Q8IY18 1101 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 PI4KAP1Q8N8J0 262 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 KAT6BQ8WYB5 2073 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 NHSL1Q5SYE7 1610 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 FAM208AQ9UK61 1670 aaKnown RBP8.33□□□□□ -1.08
CCDC30-209ENST00000477155 HSP90AB1P08238 724 aaKnown RBP8.33□□□□□ -1.08
CCDC30-209ENST00000477155 MYL6BP14649 208 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 DBF4Q9UBU7 674 aaPredicted RBP8.33□□□□□ -1.08
CCDC30-209ENST00000477155 USP16Q9Y5T5 823 aa8.33□□□□□ -1.08
CCDC30-209ENST00000477155 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
CCDC30-209ENST00000477155 HOXB7P09629 217 aa8.32□□□□□ -1.08
CCDC30-209ENST00000477155 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
CCDC30-209ENST00000477155 PCDH11XQ9BZA7 1347 aa8.32□□□□□ -1.08
CCDC30-209ENST00000477155 PCDH11YQ9BZA8 1340 aa8.32□□□□□ -1.08
CCDC30-209ENST00000477155 PTCD1O75127 700 aaKnown RBP8.32□□□□□ -1.08
CCDC30-209ENST00000477155 OVOS2A0A0G2JMS6 1433 aa8.32□□□□□ -1.08
CCDC30-209ENST00000477155 C8orf34Q49A92 452 aa8.32□□□□□ -1.08
CCDC30-209ENST00000477155 AEBP2Q6ZN18 517 aaPredicted RBP8.31□□□□□ -1.08
CCDC30-209ENST00000477155 CCDC9Q9Y3X0 531 aaKnown RBP8.31□□□□□ -1.08
CCDC30-209ENST00000477155 CEP85Q6P2H3 762 aa8.31□□□□□ -1.08
CCDC30-209ENST00000477155 CHD1LQ86WJ1 897 aa8.31□□□□□ -1.08
CCDC30-209ENST00000477155 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
CCDC30-209ENST00000477155 A0A0G2JS52 829 aa8.31□□□□□ -1.08
CCDC30-209ENST00000477155 NUCB1Q02818 461 aa8.31□□□□□ -1.08
CCDC30-209ENST00000477155 DNAAF4Q8WXU2 420 aa8.31□□□□□ -1.08
CCDC30-209ENST00000477155 VIRMAQ69YN4 1812 aaKnown RBP8.3□□□□□ -1.08
CCDC30-209ENST00000477155 GNAI2P04899 355 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 ANKRD44Q8N8A2 993 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 FMNL2Q96PY5 1086 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 SRCIN1Q9C0H9 1055 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 USP44Q9H0E7 712 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 MAP3K2Q9Y2U5 619 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 ABCC6O95255 1503 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 SNRPA1P09661 255 aaKnown RBP8.3□□□□□ -1.08
CCDC30-209ENST00000477155 RPAP2Q8IXW5 612 aaPredicted RBP8.3□□□□□ -1.08
CCDC30-209ENST00000477155 GCC1Q96CN9 775 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 HEG1Q9ULI3 1381 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 ABCA3Q99758 1704 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 PDIA6Q15084 440 aa8.3□□□□□ -1.08
CCDC30-209ENST00000477155 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
CCDC30-209ENST00000477155 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCDC30-209ENST00000477155 LRRFIP2Q9Y608 721 aaKnown RBP8.3□□□□□ -1.08
CCDC30-209ENST00000477155 KDM3BQ7LBC6 1761 aa8.29□□□□□ -1.08
CCDC30-209ENST00000477155 ANP32AP39687 249 aaKnown RBP8.29□□□□□ -1.08
CCDC30-209ENST00000477155 HYPKQ9NX55 129 aa8.29□□□□□ -1.08
CCDC30-209ENST00000477155 ERVV-2B6SEH9 535 aa8.29□□□□□ -1.08
CCDC30-209ENST00000477155 EXOC5O00471 708 aa8.29□□□□□ -1.08
CCDC30-209ENST00000477155 GNAI3P08754 354 aa8.29□□□□□ -1.08
CCDC30-209ENST00000477155 NBPF7P0C2Y1 421 aaPredicted RBP8.29□□□□□ -1.08
CCDC30-209ENST00000477155 UBTFL1P0CB47 393 aaPredicted RBP8.29□□□□□ -1.08
CCDC30-209ENST00000477155 COPS6Q7L5N1 327 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms