RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
PRKD3-209ENST00000477132 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
PRKD3-209ENST00000477132 ATG3Q9NT62 314 aa16.5■□□□□ 0.23
PRKD3-209ENST00000477132 UBR3Q6ZT12 1888 aa16.5■□□□□ 0.23
PRKD3-209ENST00000477132 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
PRKD3-209ENST00000477132 ERVV-2B6SEH9 535 aa16.49■□□□□ 0.23
PRKD3-209ENST00000477132 COL5A3P25940 1745 aaPredicted RBP16.49■□□□□ 0.23
PRKD3-209ENST00000477132 COL24A1Q17RW2 1714 aa16.49■□□□□ 0.23
PRKD3-209ENST00000477132 AKAP4Q5JQC9 854 aa16.49■□□□□ 0.23
PRKD3-209ENST00000477132 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
PRKD3-209ENST00000477132 PNPLA7Q6ZV29 1317 aa16.48■□□□□ 0.23
PRKD3-209ENST00000477132 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
PRKD3-209ENST00000477132 SMARCC1Q92922 1105 aaPredicted RBP16.48■□□□□ 0.23
PRKD3-209ENST00000477132 SIPA1L3O60292 1781 aaPredicted RBP16.48■□□□□ 0.23
PRKD3-209ENST00000477132 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
PRKD3-209ENST00000477132 TJP1Q07157 1748 aa16.47■□□□□ 0.23
PRKD3-209ENST00000477132 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
PRKD3-209ENST00000477132 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
PRKD3-209ENST00000477132 SIK1P57059 783 aa16.46■□□□□ 0.23
PRKD3-209ENST00000477132 CABP4P57796 275 aa16.46■□□□□ 0.23
PRKD3-209ENST00000477132 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
PRKD3-209ENST00000477132 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
PRKD3-209ENST00000477132 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
PRKD3-209ENST00000477132 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRKD3-209ENST00000477132 ITPK1Q13572 414 aa16.45■□□□□ 0.22
PRKD3-209ENST00000477132 AMIGO3Q86WK7 504 aa16.45■□□□□ 0.22
PRKD3-209ENST00000477132 NFATC2IPQ8NCF5 419 aa16.45■□□□□ 0.22
PRKD3-209ENST00000477132 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
PRKD3-209ENST00000477132 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
PRKD3-209ENST00000477132 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
PRKD3-209ENST00000477132 UBR2Q8IWV8 1755 aa16.44■□□□□ 0.22
PRKD3-209ENST00000477132 RNMTO43148 476 aaKnown RBP16.44■□□□□ 0.22
PRKD3-209ENST00000477132 PTGER2P43116 358 aa16.44■□□□□ 0.22
PRKD3-209ENST00000477132 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
PRKD3-209ENST00000477132 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
PRKD3-209ENST00000477132 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
PRKD3-209ENST00000477132 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
PRKD3-209ENST00000477132 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
PRKD3-209ENST00000477132 RALBP1Q15311 655 aa16.43■□□□□ 0.22
PRKD3-209ENST00000477132 MYH14Q7Z406 1995 aaKnown RBP16.43■□□□□ 0.22
PRKD3-209ENST00000477132 KCPQ6ZWJ8 1503 aa16.42■□□□□ 0.22
PRKD3-209ENST00000477132 SMIM5Q71RC9 77 aa16.42■□□□□ 0.22
PRKD3-209ENST00000477132 SGIP1Q9BQI5 828 aa16.42■□□□□ 0.22
PRKD3-209ENST00000477132 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
PRKD3-209ENST00000477132 SLC52A2Q9HAB3 445 aa16.42■□□□□ 0.22
PRKD3-209ENST00000477132 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
PRKD3-209ENST00000477132 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
PRKD3-209ENST00000477132 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
PRKD3-209ENST00000477132 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
PRKD3-209ENST00000477132 FCHSD2O94868 740 aa16.4■□□□□ 0.22
PRKD3-209ENST00000477132 IL17REQ8NFR9 667 aa16.4■□□□□ 0.22
PRKD3-209ENST00000477132 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
PRKD3-209ENST00000477132 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
PRKD3-209ENST00000477132 C4AP0C0L4 1744 aa16.39■□□□□ 0.21
PRKD3-209ENST00000477132 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
PRKD3-209ENST00000477132 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
PRKD3-209ENST00000477132 SLC39A6Q13433 755 aa16.38■□□□□ 0.21
PRKD3-209ENST00000477132 AK7Q96M32 723 aa16.38■□□□□ 0.21
PRKD3-209ENST00000477132 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
PRKD3-209ENST00000477132 PLEKHF1Q96S99 279 aa16.37■□□□□ 0.21
PRKD3-209ENST00000477132 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
PRKD3-209ENST00000477132 PHF14O94880 888 aa16.36■□□□□ 0.21
PRKD3-209ENST00000477132 SLC16A10Q8TF71 515 aa16.36■□□□□ 0.21
PRKD3-209ENST00000477132 PPP1R1BQ9UD71 204 aaPredicted RBP16.36■□□□□ 0.21
PRKD3-209ENST00000477132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
PRKD3-209ENST00000477132 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
PRKD3-209ENST00000477132 GNPATO15228 680 aa16.35■□□□□ 0.21
PRKD3-209ENST00000477132 DSG3P32926 999 aa16.34■□□□□ 0.21
PRKD3-209ENST00000477132 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
PRKD3-209ENST00000477132 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
PRKD3-209ENST00000477132 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
PRKD3-209ENST00000477132 SSFA2P28290 1259 aa16.33■□□□□ 0.2
PRKD3-209ENST00000477132 DCTN1Q14203 1278 aa16.33■□□□□ 0.2
PRKD3-209ENST00000477132 MCM10Q7L590 875 aa16.33■□□□□ 0.2
PRKD3-209ENST00000477132 HMGB2P26583 209 aaKnown RBP16.32■□□□□ 0.2
PRKD3-209ENST00000477132 TEFQ10587 303 aa16.32■□□□□ 0.2
PRKD3-209ENST00000477132 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
PRKD3-209ENST00000477132 ARXQ96QS3 562 aa16.32■□□□□ 0.2
PRKD3-209ENST00000477132 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
PRKD3-209ENST00000477132 FLAD1Q8NFF5 587 aa16.31■□□□□ 0.2
PRKD3-209ENST00000477132 FHDC1Q9C0D6 1143 aaPredicted RBP16.31■□□□□ 0.2
PRKD3-209ENST00000477132 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
PRKD3-209ENST00000477132 KCNQ3O43525 872 aa16.3■□□□□ 0.2
PRKD3-209ENST00000477132 CAPN15O75808 1086 aa16.3■□□□□ 0.2
PRKD3-209ENST00000477132 RC3H1Q5TC82 1133 aaKnown RBP16.3■□□□□ 0.2
PRKD3-209ENST00000477132 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
PRKD3-209ENST00000477132 INTS5Q6P9B9 1019 aaKnown RBP16.29■□□□□ 0.2
PRKD3-209ENST00000477132 ZNF790Q6PG37 636 aa16.29■□□□□ 0.2
PRKD3-209ENST00000477132 ZNF496Q96IT1 587 aaPredicted RBP16.29■□□□□ 0.2
PRKD3-209ENST00000477132 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
PRKD3-209ENST00000477132 CYP19A1P11511 503 aaPredicted RBP16.28■□□□□ 0.2
PRKD3-209ENST00000477132 POLD1P28340 1107 aa16.28■□□□□ 0.2
PRKD3-209ENST00000477132 NFE2L2Q16236 605 aa16.28■□□□□ 0.2
PRKD3-209ENST00000477132 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
PRKD3-209ENST00000477132 SYT17Q9BSW7 474 aa16.28■□□□□ 0.2
PRKD3-209ENST00000477132 HEG1Q9ULI3 1381 aa16.27■□□□□ 0.2
PRKD3-209ENST00000477132 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.2
PRKD3-209ENST00000477132 BTBD11A6QL63 1104 aa16.27■□□□□ 0.2
PRKD3-209ENST00000477132 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
PRKD3-209ENST00000477132 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms