RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 ATAD2BQ9ULI0 1458 aa9.82□□□□□ -0.84
CDKN1B-204ENST00000477087 WDR44Q5JSH3 913 aa9.81□□□□□ -0.84
CDKN1B-204ENST00000477087 ETNK1Q9HBU6 452 aa9.81□□□□□ -0.84
CDKN1B-204ENST00000477087 TIMMDC1Q9NPL8 285 aa9.81□□□□□ -0.84
CDKN1B-204ENST00000477087 POM121CA8CG34 1229 aa9.8□□□□□ -0.84
CDKN1B-204ENST00000477087 TLR1Q15399 786 aa9.8□□□□□ -0.84
CDKN1B-204ENST00000477087 GMCL1Q96IK5 515 aa9.8□□□□□ -0.84
CDKN1B-204ENST00000477087 SMARCA2P51531 1590 aa9.8□□□□□ -0.84
CDKN1B-204ENST00000477087 H7C1W4 665 aa9.79□□□□□ -0.84
CDKN1B-204ENST00000477087 LZTS3O60299 673 aaPredicted RBP9.79□□□□□ -0.84
CDKN1B-204ENST00000477087 GDF10P55107 478 aa9.79□□□□□ -0.84
CDKN1B-204ENST00000477087 FOXR1Q6PIV2 292 aa9.79□□□□□ -0.84
CDKN1B-204ENST00000477087 NFATC2IPQ8NCF5 419 aa9.79□□□□□ -0.84
CDKN1B-204ENST00000477087 CLUAP1Q96AJ1 413 aa9.79□□□□□ -0.84
CDKN1B-204ENST00000477087 NOD1Q9Y239 953 aa9.79□□□□□ -0.84
CDKN1B-204ENST00000477087 HRH3Q9Y5N1 445 aa9.79□□□□□ -0.84
CDKN1B-204ENST00000477087 STAU1O95793 577 aaKnown RBP9.78□□□□□ -0.84
CDKN1B-204ENST00000477087 PHKA2P46019 1235 aa9.78□□□□□ -0.84
CDKN1B-204ENST00000477087 PROSER2Q86WR7 435 aaPredicted RBP9.78□□□□□ -0.84
CDKN1B-204ENST00000477087 TRIM22Q8IYM9 498 aa9.78□□□□□ -0.84
CDKN1B-204ENST00000477087 FHDC1Q9C0D6 1143 aaPredicted RBP9.78□□□□□ -0.84
CDKN1B-204ENST00000477087 CUEDC1Q9NWM3 386 aaPredicted RBP9.78□□□□□ -0.84
CDKN1B-204ENST00000477087 INHAP05111 366 aa9.77□□□□□ -0.85
CDKN1B-204ENST00000477087 KRT76Q01546 638 aa9.77□□□□□ -0.85
CDKN1B-204ENST00000477087 HDGFL1Q5TGJ6 251 aa9.77□□□□□ -0.85
CDKN1B-204ENST00000477087 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.85
CDKN1B-204ENST00000477087 EIF4G1Q04637 1599 aaKnown RBP9.76□□□□□ -0.85
CDKN1B-204ENST00000477087 F11P03951 625 aa9.76□□□□□ -0.85
CDKN1B-204ENST00000477087 LORP23490 312 aaPredicted RBP9.76□□□□□ -0.85
CDKN1B-204ENST00000477087 SCNN1DP51172 638 aa9.76□□□□□ -0.85
CDKN1B-204ENST00000477087 RHBDD1Q8TEB9 315 aa9.76□□□□□ -0.85
CDKN1B-204ENST00000477087 ZNF837Q96EG3 531 aaPredicted RBP9.76□□□□□ -0.85
CDKN1B-204ENST00000477087 USP17L5A8MUK1 530 aa9.75□□□□□ -0.85
CDKN1B-204ENST00000477087 PSME1Q06323 249 aa9.75□□□□□ -0.85
CDKN1B-204ENST00000477087 NCOA4Q13772 614 aa9.75□□□□□ -0.85
CDKN1B-204ENST00000477087 WIZO95785 1651 aa9.74□□□□□ -0.85
CDKN1B-204ENST00000477087 A0A1B0GTH6 734 aa9.74□□□□□ -0.85
CDKN1B-204ENST00000477087 GTF2IP78347 998 aa9.74□□□□□ -0.85
CDKN1B-204ENST00000477087 C4orf17Q53FE4 359 aa9.74□□□□□ -0.85
CDKN1B-204ENST00000477087 RNFT1Q5M7Z0 435 aa9.74□□□□□ -0.85
CDKN1B-204ENST00000477087 ADAMTS19Q8TE59 1207 aa9.74□□□□□ -0.85
CDKN1B-204ENST00000477087 TRERF1Q96PN7 1200 aa9.74□□□□□ -0.85
CDKN1B-204ENST00000477087 SERTAD1Q9UHV2 236 aa9.74□□□□□ -0.85
CDKN1B-204ENST00000477087 DBN1Q16643 649 aa9.73□□□□□ -0.85
CDKN1B-204ENST00000477087 PPARGC1BQ86YN6 1023 aaKnown RBP9.73□□□□□ -0.85
CDKN1B-204ENST00000477087 DEPDC4Q8N2C3 294 aa9.73□□□□□ -0.85
CDKN1B-204ENST00000477087 NUCKS1Q9H1E3 243 aaKnown RBP9.73□□□□□ -0.85
CDKN1B-204ENST00000477087 GPAMQ9HCL2 828 aa9.73□□□□□ -0.85
CDKN1B-204ENST00000477087 CSB-PGBD3P0DP91 1061 aa9.72□□□□□ -0.85
CDKN1B-204ENST00000477087 SMTNP53814 917 aa9.72□□□□□ -0.85
CDKN1B-204ENST00000477087 TRIM50Q86XT4 487 aa9.72□□□□□ -0.85
CDKN1B-204ENST00000477087 PGBD3Q8N328 593 aa9.72□□□□□ -0.85
CDKN1B-204ENST00000477087 GTPBP3Q969Y2 492 aaKnown RBP9.72□□□□□ -0.85
CDKN1B-204ENST00000477087 PCDHGA11Q9Y5H2 935 aa9.72□□□□□ -0.85
CDKN1B-204ENST00000477087 TMEM229AB2RXF0 380 aa9.71□□□□□ -0.86
CDKN1B-204ENST00000477087 GPR25O00155 361 aa9.71□□□□□ -0.86
CDKN1B-204ENST00000477087 BACH1O14867 736 aa9.71□□□□□ -0.86
CDKN1B-204ENST00000477087 HMGXB3Q12766 1538 aa9.71□□□□□ -0.86
CDKN1B-204ENST00000477087 A6NJR5 290 aa9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 ATP9BO43861 1147 aa9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 PLA2G4AP47712 749 aa9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 TBC1D9Q6ZT07 1266 aa9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 PLEKHM2Q8IWE5 1019 aa9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 GLMNQ92990 594 aa9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 NIFKQ9BYG3 293 aaKnown RBP9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
CDKN1B-204ENST00000477087 CCDC88BA6NC98 1476 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 USP17L2Q6R6M4 530 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 USP17L1Q7RTZ2 530 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 SVOPQ8N4V2 548 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 UCN2Q96RP3 112 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 MBIPQ9NS73 344 aa9.69□□□□□ -0.86
CDKN1B-204ENST00000477087 A6NJY4 79 aa9.68□□□□□ -0.86
CDKN1B-204ENST00000477087 MSX1P28360 303 aa9.68□□□□□ -0.86
CDKN1B-204ENST00000477087 SRSF11Q05519 484 aaKnown RBP9.68□□□□□ -0.86
CDKN1B-204ENST00000477087 GAS6Q14393 721 aa9.68□□□□□ -0.86
CDKN1B-204ENST00000477087 LBRQ14739 615 aaKnown RBP9.68□□□□□ -0.86
CDKN1B-204ENST00000477087 EFHC2Q5JST6 749 aa9.68□□□□□ -0.86
CDKN1B-204ENST00000477087 SLC4A9Q96Q91 983 aa9.68□□□□□ -0.86
CDKN1B-204ENST00000477087 ADAMTS2O95450 1211 aa9.67□□□□□ -0.86
CDKN1B-204ENST00000477087 SLURP2P0DP57 97 aa9.67□□□□□ -0.86
CDKN1B-204ENST00000477087 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDKN1B-204ENST00000477087 RUBCNLQ9H714 662 aa9.67□□□□□ -0.86
CDKN1B-204ENST00000477087 CDK2AP1O14519 115 aa9.66□□□□□ -0.86
CDKN1B-204ENST00000477087 MTFR1Q15390 333 aa9.66□□□□□ -0.86
CDKN1B-204ENST00000477087 AIDAQ96BJ3 306 aa9.66□□□□□ -0.86
CDKN1B-204ENST00000477087 CALR3Q96L12 384 aaKnown RBP9.66□□□□□ -0.86
CDKN1B-204ENST00000477087 ZNF358Q9NW07 568 aa9.66□□□□□ -0.86
CDKN1B-204ENST00000477087 CABP1Q9NZU7 370 aa9.66□□□□□ -0.86
CDKN1B-204ENST00000477087 NSFL1CQ9UNZ2 370 aaKnown RBP9.66□□□□□ -0.86
CDKN1B-204ENST00000477087 PHF24Q9UPV7 400 aa9.66□□□□□ -0.86
CDKN1B-204ENST00000477087 NBPF1Q3BBV0 1214 aa9.65□□□□□ -0.86
CDKN1B-204ENST00000477087 ZNF385CQ66K41 422 aaPredicted RBP9.65□□□□□ -0.86
CDKN1B-204ENST00000477087 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
CDKN1B-204ENST00000477087 MX2P20592 715 aa9.64□□□□□ -0.87
CDKN1B-204ENST00000477087 MAP3K10Q02779 954 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms