RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 C1orf115Q9H7X2 142 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 TIMELESSQ9UNS1 1208 aa7.31□□□□□ -1.24
ITGA4-208ENST00000476824 SLC35F4A4IF30 521 aa7.3□□□□□ -1.24
ITGA4-208ENST00000476824 H3BM21 787 aa7.3□□□□□ -1.24
ITGA4-208ENST00000476824 PHKA2P46019 1235 aa7.3□□□□□ -1.24
ITGA4-208ENST00000476824 KANK4Q5T7N3 995 aaPredicted RBP7.3□□□□□ -1.24
ITGA4-208ENST00000476824 ZSCAN10Q96SZ4 725 aaPredicted RBP7.3□□□□□ -1.24
ITGA4-208ENST00000476824 DNAAF2Q9NVR5 837 aaKnown RBP7.3□□□□□ -1.24
ITGA4-208ENST00000476824 ZNF358Q9NW07 568 aa7.3□□□□□ -1.24
ITGA4-208ENST00000476824 USP3Q9Y6I4 520 aa7.3□□□□□ -1.24
ITGA4-208ENST00000476824 ERBB4Q15303 1308 aa7.29□□□□□ -1.24
ITGA4-208ENST00000476824 WFS1O76024 890 aa7.29□□□□□ -1.24
ITGA4-208ENST00000476824 RASA1P20936 1047 aa7.29□□□□□ -1.24
ITGA4-208ENST00000476824 LCE2AQ5TA79 106 aaPredicted RBP7.29□□□□□ -1.24
ITGA4-208ENST00000476824 CCDC102BQ68D86 513 aa7.29□□□□□ -1.24
ITGA4-208ENST00000476824 NBPF10Q6P3W6 841 aaKnown RBP7.29□□□□□ -1.24
ITGA4-208ENST00000476824 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
ITGA4-208ENST00000476824 TRIM50Q86XT4 487 aa7.29□□□□□ -1.24
ITGA4-208ENST00000476824 NBPF15Q8N660 670 aa7.29□□□□□ -1.24
ITGA4-208ENST00000476824 WASLO00401 505 aaPredicted RBP7.28□□□□□ -1.24
ITGA4-208ENST00000476824 DKK1O94907 266 aa7.28□□□□□ -1.24
ITGA4-208ENST00000476824 CRTC2Q53ET0 693 aaPredicted RBP7.28□□□□□ -1.24
ITGA4-208ENST00000476824 TMEM214Q6NUQ4 689 aaKnown RBP7.28□□□□□ -1.24
ITGA4-208ENST00000476824 CUEDC1Q9NWM3 386 aaPredicted RBP7.28□□□□□ -1.24
ITGA4-208ENST00000476824 SFI1A8K8P3 1242 aa7.27□□□□□ -1.25
ITGA4-208ENST00000476824 SPATA31C2B4DYI2 1134 aa7.27□□□□□ -1.25
ITGA4-208ENST00000476824 ATP1A2P50993 1020 aa7.27□□□□□ -1.25
ITGA4-208ENST00000476824 SMTNP53814 917 aa7.27□□□□□ -1.25
ITGA4-208ENST00000476824 C4orf17Q53FE4 359 aa7.27□□□□□ -1.25
ITGA4-208ENST00000476824 TBCELQ5QJ74 424 aa7.27□□□□□ -1.25
ITGA4-208ENST00000476824 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
ITGA4-208ENST00000476824 LGR5O75473 907 aa7.26□□□□□ -1.25
ITGA4-208ENST00000476824 TAS1R3Q7RTX0 852 aa7.26□□□□□ -1.25
ITGA4-208ENST00000476824 PPARGC1BQ86YN6 1023 aaKnown RBP7.26□□□□□ -1.25
ITGA4-208ENST00000476824 LARGE2Q8N3Y3 721 aa7.26□□□□□ -1.25
ITGA4-208ENST00000476824 SLC4A9Q96Q91 983 aa7.26□□□□□ -1.25
ITGA4-208ENST00000476824 VRTNQ9H8Y1 702 aa7.26□□□□□ -1.25
ITGA4-208ENST00000476824 TIMMDC1Q9NPL8 285 aa7.26□□□□□ -1.25
ITGA4-208ENST00000476824 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.25□□□□□ -1.25
ITGA4-208ENST00000476824 A6NJY4 79 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L15C9J2P7 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L10C9JJH3 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L13C9JLJ4 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L12C9JPN9 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L11C9JVI0 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L21D6R901 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L18D6R9N7 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L22D6RA61 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L17D6RBQ6 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L19D6RCP7 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L20D6RJB6 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 SUPT5HO00267 1087 aaKnown RBP7.25□□□□□ -1.25
ITGA4-208ENST00000476824 ITGA6P23229 1130 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 USP17L24Q0WX57 530 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 PTK7Q13308 1070 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 GNASQ5JWF2 1037 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 CCDC82Q8N4S0 544 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 TSEN2Q8NCE0 465 aaKnown RBP7.25□□□□□ -1.25
ITGA4-208ENST00000476824 SLC16A10Q8TF71 515 aa7.25□□□□□ -1.25
ITGA4-208ENST00000476824 CCDC97Q96F63 343 aaPredicted RBP7.25□□□□□ -1.25
ITGA4-208ENST00000476824 GAS2L1Q99501 681 aaPredicted RBP7.25□□□□□ -1.25
ITGA4-208ENST00000476824 IQSEC3Q9UPP2 1182 aaPredicted RBP7.25□□□□□ -1.25
ITGA4-208ENST00000476824 PLA2G4AP47712 749 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 EPHA4P54764 986 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 DPYDQ12882 1025 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 MTFR1Q15390 333 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
ITGA4-208ENST00000476824 RIPOR1Q6ZS17 1223 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 NPAS3Q8IXF0 933 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 ZNF295-AS1Q8N0V1 137 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 SIX5Q8N196 739 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 VWA5B2Q8N398 1253 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 GPR161Q8N6U8 529 aaKnown RBP7.24□□□□□ -1.25
ITGA4-208ENST00000476824 RHBDD1Q8TEB9 315 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 GPAMQ9HCL2 828 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 PARP3Q9Y6F1 533 aa7.24□□□□□ -1.25
ITGA4-208ENST00000476824 CDC14CA4D256 554 aa7.23□□□□□ -1.25
ITGA4-208ENST00000476824 BACH1O14867 736 aa7.23□□□□□ -1.25
ITGA4-208ENST00000476824 GTF2E1P29083 439 aaPredicted RBP7.23□□□□□ -1.25
ITGA4-208ENST00000476824 GMPRP36959 345 aa7.23□□□□□ -1.25
ITGA4-208ENST00000476824 GAS2L2Q8NHY3 880 aa7.23□□□□□ -1.25
ITGA4-208ENST00000476824 IRF7Q92985 503 aa7.23□□□□□ -1.25
ITGA4-208ENST00000476824 SCHIP1Q9P0W5 487 aaPredicted RBP7.23□□□□□ -1.25
ITGA4-208ENST00000476824 DYRK1BQ9Y463 629 aa7.23□□□□□ -1.25
ITGA4-208ENST00000476824 CDK2AP1O14519 115 aa7.22□□□□□ -1.25
ITGA4-208ENST00000476824 SRPK2P78362 688 aaKnown RBP7.22□□□□□ -1.25
ITGA4-208ENST00000476824 FOXK2Q01167 660 aa7.22□□□□□ -1.25
ITGA4-208ENST00000476824 WDR44Q5JSH3 913 aa7.22□□□□□ -1.25
ITGA4-208ENST00000476824 ANKMY2Q8IV38 441 aa7.22□□□□□ -1.25
ITGA4-208ENST00000476824 SLC9A9Q8IVB4 645 aa7.22□□□□□ -1.25
ITGA4-208ENST00000476824 TSPAN10Q9H1Z9 355 aaPredicted RBP7.22□□□□□ -1.25
ITGA4-208ENST00000476824 FAM196BA6NMK8 535 aa7.21□□□□□ -1.26
ITGA4-208ENST00000476824 THBS1P07996 1170 aa7.21□□□□□ -1.26
ITGA4-208ENST00000476824 MSX1P28360 303 aa7.21□□□□□ -1.26
ITGA4-208ENST00000476824 SEC13P55735 322 aa7.21□□□□□ -1.26
ITGA4-208ENST00000476824 DBN1Q16643 649 aa7.21□□□□□ -1.26
ITGA4-208ENST00000476824 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
ITGA4-208ENST00000476824 ZDHHC1Q8WTX9 485 aa7.21□□□□□ -1.26
ITGA4-208ENST00000476824 ZNF837Q96EG3 531 aaPredicted RBP7.21□□□□□ -1.26
ITGA4-208ENST00000476824 ARXQ96QS3 562 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms