RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 FAM163BP0C2L3 166 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 ITGAEP38570 1179 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 CD151P48509 253 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 NLRP7Q8WX94 980 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 FAM210AQ96ND0 272 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 SEZ6LQ9BYH1 1024 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 TMEM134Q9H6X4 195 aa7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 ISY1Q9ULR0 285 aaKnown RBP7.35□□□□□ -1.23
SPTLC3-205ENST00000476791 A6NJR5 290 aa7.34□□□□□ -1.23
SPTLC3-205ENST00000476791 CLCN1P35523 988 aa7.34□□□□□ -1.23
SPTLC3-205ENST00000476791 CCDC70Q6NSX1 233 aa7.34□□□□□ -1.23
SPTLC3-205ENST00000476791 HSCBQ8IWL3 235 aa7.34□□□□□ -1.23
SPTLC3-205ENST00000476791 SLF2Q8IX21 1173 aa7.34□□□□□ -1.23
SPTLC3-205ENST00000476791 TMC1Q8TDI8 760 aa7.34□□□□□ -1.23
SPTLC3-205ENST00000476791 GTPBP4Q9BZE4 634 aaKnown RBP7.34□□□□□ -1.23
SPTLC3-205ENST00000476791 IVNS1ABPQ9Y6Y0 642 aa7.34□□□□□ -1.23
SPTLC3-205ENST00000476791 ZNF853P0CG23 659 aa7.34□□□□□ -1.24
SPTLC3-205ENST00000476791 BIRC2Q13490 618 aa7.34□□□□□ -1.24
SPTLC3-205ENST00000476791 C16orf87Q6PH81 154 aa7.34□□□□□ -1.24
SPTLC3-205ENST00000476791 INO80BQ9C086 356 aaPredicted RBP7.34□□□□□ -1.24
SPTLC3-205ENST00000476791 ZMYND10O75800 440 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 TCF3P15923 654 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 HMGN5P82970 282 aaKnown RBP7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 MAP7D2Q96T17 732 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 G3BP2Q9UN86 482 aaKnown RBP7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 NACADO15069 1562 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 KIF16BQ96L93 1317 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 SYNRGQ9UMZ2 1314 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 RBM47A0AV96 593 aaKnown RBP7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 PPP1R12AO14974 1030 aaPredicted RBP7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 ECEL1O95672 775 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 IFT88Q13099 833 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 ZNF232Q9UNY5 417 aa7.33□□□□□ -1.24
SPTLC3-205ENST00000476791 ABCD1P33897 745 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 SLC4A3P48751 1232 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 INHBEP58166 350 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 LONRF1Q17RB8 773 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 TAF4BQ92750 862 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 TRIM34Q9BYJ4 488 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 MUC3BQ9H195 1237 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 KLHL33A6NCF5 533 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 ABL2P42684 1182 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 CCDC146Q8IYE0 955 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 PHC3Q8NDX5 983 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 PHOX2BQ99453 314 aa7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 DUSP9Q99956 384 aaKnown RBP7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 RSPH9Q9H1X1 276 aaPredicted RBP7.32□□□□□ -1.24
SPTLC3-205ENST00000476791 MECOMQ03112 1051 aa7.31□□□□□ -1.24
SPTLC3-205ENST00000476791 OGFOD1Q8N543 542 aa7.31□□□□□ -1.24
SPTLC3-205ENST00000476791 SMC4Q9NTJ3 1288 aa7.31□□□□□ -1.24
SPTLC3-205ENST00000476791 IPO5O00410 1097 aaKnown RBP7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 TNNT1P13805 278 aa7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 CDC37L1Q7L3B6 337 aa7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 UBXN4Q92575 508 aa7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 NCAPGQ9BPX3 1015 aa7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 SUDS3Q9H7L9 328 aaPredicted RBP7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 GIGYF1O75420 1035 aaPredicted RBP7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 NGDNQ8NEJ9 315 aaKnown RBP7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 SPACA7Q96KW9 195 aa7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 AGBL1Q96MI9 1066 aa7.3□□□□□ -1.24
SPTLC3-205ENST00000476791 RRM1P23921 792 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 CCDC15Q0P6D6 951 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 MAP2K5Q13163 448 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 HSP90AB2PQ58FF8 381 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 NOM1Q5C9Z4 860 aaKnown RBP7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 FNBP4Q8N3X1 1017 aaPredicted RBP7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 UHMK1Q8TAS1 419 aaKnown RBP7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 FRAT1Q92837 279 aaPredicted RBP7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 RPS6KC1Q96S38 1066 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 SLX1AQ9BQ83 275 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 CWC25Q9NXE8 425 aaPredicted RBP7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 SUN2Q9UH99 717 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 GOLGA6L3A6NEY3 463 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 CTAGE5O15320 804 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 IPO7O95373 1038 aaKnown RBP7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 KCNJ4P48050 445 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 SND1Q7KZF4 910 aaKnown RBP eCLIP7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 NLGN1Q8N2Q7 840 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 FMNL2Q96PY5 1086 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 RMI1Q9H9A7 625 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 DONSONQ9NYP3 566 aa7.29□□□□□ -1.24
SPTLC3-205ENST00000476791 LARP1BQ659C4 914 aaKnown RBP7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 ZNF512BQ96KM6 892 aaPredicted RBP7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 ZNF396Q96N95 335 aaPredicted RBP7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 RETREG1Q9H6L5 497 aa7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 RABL2BQ9UNT1 228 aa7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 ITGBL1O95965 494 aaPredicted RBP7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 HDLBPQ00341 1268 aaKnown RBP7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 POU5F1Q01860 360 aaKnown RBP7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 CC2D1AQ6P1N0 951 aaPredicted RBP7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 SENP7Q9BQF6 1050 aa7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 PAGR1Q9BTK6 254 aa7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 EFCC1Q9HA90 598 aa7.28□□□□□ -1.24
SPTLC3-205ENST00000476791 PLEKHG3A1L390 1219 aa7.27□□□□□ -1.24
SPTLC3-205ENST00000476791 SLC10A3P09131 477 aa7.27□□□□□ -1.24
SPTLC3-205ENST00000476791 KCNC4Q03721 635 aa7.27□□□□□ -1.24
SPTLC3-205ENST00000476791 DZIP3Q86Y13 1208 aaKnown RBP7.27□□□□□ -1.24
SPTLC3-205ENST00000476791 SNRNP27Q8WVK2 155 aaKnown RBP7.27□□□□□ -1.24
SPTLC3-205ENST00000476791 JADE2Q9NQC1 790 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms