RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 ATP6V1AP38606 617 aa18.25■□□□□ 0.51
HMGCS2-203ENST00000476640 LINC00116Q8NCU8 138 aa18.24■□□□□ 0.51
HMGCS2-203ENST00000476640 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
HMGCS2-203ENST00000476640 GNPATO15228 680 aa18.23■□□□□ 0.51
HMGCS2-203ENST00000476640 ZNF530Q6P9A1 599 aaPredicted RBP18.23■□□□□ 0.51
HMGCS2-203ENST00000476640 ATG3Q9NT62 314 aa18.23■□□□□ 0.51
HMGCS2-203ENST00000476640 SCN11AQ9UI33 1791 aa18.22■□□□□ 0.51
HMGCS2-203ENST00000476640 VIRMAQ69YN4 1812 aaKnown RBP18.22■□□□□ 0.51
HMGCS2-203ENST00000476640 C1orf141Q5JVX7 400 aa18.22■□□□□ 0.51
HMGCS2-203ENST00000476640 CABP4P57796 275 aa18.21■□□□□ 0.51
HMGCS2-203ENST00000476640 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
HMGCS2-203ENST00000476640 ITPK1Q13572 414 aa18.2■□□□□ 0.5
HMGCS2-203ENST00000476640 KDRP35968 1356 aa18.19■□□□□ 0.5
HMGCS2-203ENST00000476640 YBX3P16989 372 aaKnown RBP eCLIP18.19■□□□□ 0.5
HMGCS2-203ENST00000476640 MTHFSP49914 203 aa18.19■□□□□ 0.5
HMGCS2-203ENST00000476640 AMIGO3Q86WK7 504 aa18.19■□□□□ 0.5
HMGCS2-203ENST00000476640 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
HMGCS2-203ENST00000476640 RTCBQ9Y3I0 505 aaKnown RBP18.19■□□□□ 0.5
HMGCS2-203ENST00000476640 KDM6AO15550 1401 aaPredicted RBP18.18■□□□□ 0.5
HMGCS2-203ENST00000476640 RC3H1Q5TC82 1133 aaKnown RBP18.18■□□□□ 0.5
HMGCS2-203ENST00000476640 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
HMGCS2-203ENST00000476640 KIF13BQ9NQT8 1826 aa18.17■□□□□ 0.5
HMGCS2-203ENST00000476640 ADRA2BP18089 450 aa18.17■□□□□ 0.5
HMGCS2-203ENST00000476640 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
HMGCS2-203ENST00000476640 AEBP1Q8IUX7 1158 aa18.17■□□□□ 0.5
HMGCS2-203ENST00000476640 KIF7Q2M1P5 1343 aa18.17■□□□□ 0.5
HMGCS2-203ENST00000476640 IL13P35225 146 aa18.16■□□□□ 0.5
HMGCS2-203ENST00000476640 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
HMGCS2-203ENST00000476640 MYH14Q7Z406 1995 aaKnown RBP18.16■□□□□ 0.5
HMGCS2-203ENST00000476640 SMIM5Q71RC9 77 aa18.15■□□□□ 0.5
HMGCS2-203ENST00000476640 NLGN1Q8N2Q7 840 aa18.15■□□□□ 0.5
HMGCS2-203ENST00000476640 CNTNAP4Q9C0A0 1308 aa18.15■□□□□ 0.5
HMGCS2-203ENST00000476640 CICQ96RK0 1608 aaPredicted RBP18.15■□□□□ 0.5
HMGCS2-203ENST00000476640 C4AP0C0L4 1744 aa18.15■□□□□ 0.5
HMGCS2-203ENST00000476640 GIGYF1O75420 1035 aaPredicted RBP18.13■□□□□ 0.49
HMGCS2-203ENST00000476640 C1QTNF8P60827 252 aa18.13■□□□□ 0.49
HMGCS2-203ENST00000476640 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
HMGCS2-203ENST00000476640 MMP10P09238 476 aa18.12■□□□□ 0.49
HMGCS2-203ENST00000476640 RFC4P35249 363 aa18.12■□□□□ 0.49
HMGCS2-203ENST00000476640 AKAP4Q5JQC9 854 aa18.12■□□□□ 0.49
HMGCS2-203ENST00000476640 NFATC2IPQ8NCF5 419 aa18.12■□□□□ 0.49
HMGCS2-203ENST00000476640 SLC4A9Q96Q91 983 aa18.12■□□□□ 0.49
HMGCS2-203ENST00000476640 TJP1Q07157 1748 aa18.12■□□□□ 0.49
HMGCS2-203ENST00000476640 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
HMGCS2-203ENST00000476640 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
HMGCS2-203ENST00000476640 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
HMGCS2-203ENST00000476640 DIAPH1O60610 1272 aaKnown RBP18.09■□□□□ 0.49
HMGCS2-203ENST00000476640 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.48
HMGCS2-203ENST00000476640 CRKLP46109 303 aaKnown RBP18.08■□□□□ 0.48
HMGCS2-203ENST00000476640 TGFB2P61812 414 aa18.08■□□□□ 0.48
HMGCS2-203ENST00000476640 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.48
HMGCS2-203ENST00000476640 SLC52A2Q9HAB3 445 aa18.08■□□□□ 0.48
HMGCS2-203ENST00000476640 CCDC87Q9NVE4 849 aa18.08■□□□□ 0.48
HMGCS2-203ENST00000476640 PARP3Q9Y6F1 533 aa18.08■□□□□ 0.48
HMGCS2-203ENST00000476640 KIAA1551Q9HCM1 1747 aa18.08■□□□□ 0.48
HMGCS2-203ENST00000476640 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
HMGCS2-203ENST00000476640 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
HMGCS2-203ENST00000476640 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
HMGCS2-203ENST00000476640 BRCA1P38398 1863 aaKnown RBP18.07■□□□□ 0.48
HMGCS2-203ENST00000476640 MRC1P22897 1456 aa18.07■□□□□ 0.48
HMGCS2-203ENST00000476640 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
HMGCS2-203ENST00000476640 HMOX1P09601 288 aa18.06■□□□□ 0.48
HMGCS2-203ENST00000476640 GYS1P13807 737 aa18.06■□□□□ 0.48
HMGCS2-203ENST00000476640 C10orf71Q711Q0 1435 aa18.06■□□□□ 0.48
HMGCS2-203ENST00000476640 GPBP1L1Q9HC44 474 aaPredicted RBP18.05■□□□□ 0.48
HMGCS2-203ENST00000476640 PXDNLA1KZ92 1463 aa18.05■□□□□ 0.48
HMGCS2-203ENST00000476640 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
HMGCS2-203ENST00000476640 RNMTO43148 476 aaKnown RBP18.04■□□□□ 0.48
HMGCS2-203ENST00000476640 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
HMGCS2-203ENST00000476640 ADCY9O60503 1353 aa18.04■□□□□ 0.48
HMGCS2-203ENST00000476640 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
HMGCS2-203ENST00000476640 USP42Q9H9J4 1324 aaKnown RBP18.02■□□□□ 0.48
HMGCS2-203ENST00000476640 LGR6Q9HBX8 967 aa18.02■□□□□ 0.48
HMGCS2-203ENST00000476640 ZPR1O75312 459 aa18.01■□□□□ 0.47
HMGCS2-203ENST00000476640 MTHFSDQ2M296 383 aaKnown RBP18.01■□□□□ 0.47
HMGCS2-203ENST00000476640 A0A0G2JLW4 131 aa18■□□□□ 0.47
HMGCS2-203ENST00000476640 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
HMGCS2-203ENST00000476640 BCS1LQ9Y276 419 aa18■□□□□ 0.47
HMGCS2-203ENST00000476640 COL3A1P02461 1466 aaPredicted RBP18■□□□□ 0.47
HMGCS2-203ENST00000476640 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
HMGCS2-203ENST00000476640 KCPQ6ZWJ8 1503 aa17.99■□□□□ 0.47
HMGCS2-203ENST00000476640 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
HMGCS2-203ENST00000476640 DNAJC10Q8IXB1 793 aa17.99■□□□□ 0.47
HMGCS2-203ENST00000476640 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
HMGCS2-203ENST00000476640 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
HMGCS2-203ENST00000476640 DPEP1P16444 411 aa17.98■□□□□ 0.47
HMGCS2-203ENST00000476640 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
HMGCS2-203ENST00000476640 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
HMGCS2-203ENST00000476640 SRP68Q9UHB9 627 aaKnown RBP17.98■□□□□ 0.47
HMGCS2-203ENST00000476640 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
HMGCS2-203ENST00000476640 FCHSD2O94868 740 aa17.97■□□□□ 0.47
HMGCS2-203ENST00000476640 CYP19A1P11511 503 aaPredicted RBP17.97■□□□□ 0.47
HMGCS2-203ENST00000476640 TEFQ10587 303 aa17.97■□□□□ 0.47
HMGCS2-203ENST00000476640 SLC39A6Q13433 755 aa17.97■□□□□ 0.47
HMGCS2-203ENST00000476640 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
HMGCS2-203ENST00000476640 FKBP8Q14318 412 aa17.97■□□□□ 0.47
HMGCS2-203ENST00000476640 ZNF526Q8TF50 670 aaPredicted RBP17.97■□□□□ 0.47
HMGCS2-203ENST00000476640 SOS1Q07889 1333 aaPredicted RBP17.97■□□□□ 0.47
HMGCS2-203ENST00000476640 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
HMGCS2-203ENST00000476640 PIM2Q9P1W9 311 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms