RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 SMIM5Q71RC9 77 aa14.61□□□□□ -0.07
SEC13-214ENST00000476597 NFATC2IPQ8NCF5 419 aa14.61□□□□□ -0.07
SEC13-214ENST00000476597 QSER1Q2KHR3 1735 aa14.61□□□□□ -0.07
SEC13-214ENST00000476597 KDM6AO15550 1401 aaPredicted RBP14.6□□□□□ -0.07
SEC13-214ENST00000476597 HMOX1P09601 288 aa14.6□□□□□ -0.07
SEC13-214ENST00000476597 SSFA2P28290 1259 aa14.6□□□□□ -0.07
SEC13-214ENST00000476597 CNGB1Q14028 1251 aaPredicted RBP14.6□□□□□ -0.07
SEC13-214ENST00000476597 AKAP4Q5JQC9 854 aa14.6□□□□□ -0.07
SEC13-214ENST00000476597 MSL1Q68DK7 614 aa14.6□□□□□ -0.07
SEC13-214ENST00000476597 RBM42Q9BTD8 480 aaKnown RBP14.6□□□□□ -0.07
SEC13-214ENST00000476597 GOLGB1Q14789 3259 aaKnown RBP14.6□□□□□ -0.07
SEC13-214ENST00000476597 PHF14O94880 888 aa14.59□□□□□ -0.07
SEC13-214ENST00000476597 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
SEC13-214ENST00000476597 ITGB4P16144 1822 aa14.59□□□□□ -0.07
SEC13-214ENST00000476597 GNPATO15228 680 aa14.58□□□□□ -0.08
SEC13-214ENST00000476597 MTHFSDQ2M296 383 aaKnown RBP14.58□□□□□ -0.08
SEC13-214ENST00000476597 RC3H1Q5TC82 1133 aaKnown RBP14.58□□□□□ -0.08
SEC13-214ENST00000476597 LGR6Q9HBX8 967 aa14.58□□□□□ -0.08
SEC13-214ENST00000476597 NLGN2Q8NFZ4 835 aa14.57□□□□□ -0.08
SEC13-214ENST00000476597 C5P01031 1676 aa14.56□□□□□ -0.08
SEC13-214ENST00000476597 C4BP0C0L5 1744 aa14.56□□□□□ -0.08
SEC13-214ENST00000476597 COL24A1Q17RW2 1714 aa14.56□□□□□ -0.08
SEC13-214ENST00000476597 GPR162Q16538 588 aa14.56□□□□□ -0.08
SEC13-214ENST00000476597 TRAPPC3LQ5T215 181 aa14.56□□□□□ -0.08
SEC13-214ENST00000476597 SLC52A2Q9HAB3 445 aa14.56□□□□□ -0.08
SEC13-214ENST00000476597 RTCBQ9Y3I0 505 aaKnown RBP14.56□□□□□ -0.08
SEC13-214ENST00000476597 TUBGCP6Q96RT7 1819 aa14.55□□□□□ -0.08
SEC13-214ENST00000476597 U2SURPO15042 1029 aaKnown RBP14.55□□□□□ -0.08
SEC13-214ENST00000476597 RNMTO43148 476 aaKnown RBP14.55□□□□□ -0.08
SEC13-214ENST00000476597 PTCD1O75127 700 aaKnown RBP14.55□□□□□ -0.08
SEC13-214ENST00000476597 RPS6KA4O75676 772 aa14.55□□□□□ -0.08
SEC13-214ENST00000476597 CD2APQ9Y5K6 639 aa14.55□□□□□ -0.08
SEC13-214ENST00000476597 CNTNAP4Q9C0A0 1308 aa14.54□□□□□ -0.08
SEC13-214ENST00000476597 ADRA2BP18089 450 aa14.53□□□□□ -0.08
SEC13-214ENST00000476597 ARHGEF1Q92888 912 aaKnown RBP14.53□□□□□ -0.08
SEC13-214ENST00000476597 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.08
SEC13-214ENST00000476597 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.08
SEC13-214ENST00000476597 PPP2R1AP30153 589 aa14.52□□□□□ -0.09
SEC13-214ENST00000476597 CFAP53Q96M91 514 aa14.52□□□□□ -0.09
SEC13-214ENST00000476597 CRKLP46109 303 aaKnown RBP14.51□□□□□ -0.09
SEC13-214ENST00000476597 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
SEC13-214ENST00000476597 NLGN1Q8N2Q7 840 aa14.51□□□□□ -0.09
SEC13-214ENST00000476597 YBX3P16989 372 aaKnown RBP eCLIP14.5□□□□□ -0.092e-11■■□□□ 14.4
SEC13-214ENST00000476597 RFC4P35249 363 aa14.5□□□□□ -0.09
SEC13-214ENST00000476597 SLC39A6Q13433 755 aa14.5□□□□□ -0.09
SEC13-214ENST00000476597 GAS2L2Q8NHY3 880 aa14.5□□□□□ -0.09
SEC13-214ENST00000476597 NUDCQ9Y266 331 aa14.5□□□□□ -0.09
SEC13-214ENST00000476597 GNAT3A8MTJ3 354 aa14.49□□□□□ -0.09
SEC13-214ENST00000476597 GRIN3BO60391 1043 aa14.49□□□□□ -0.09
SEC13-214ENST00000476597 MMP10P09238 476 aa14.49□□□□□ -0.09
SEC13-214ENST00000476597 GYS1P13807 737 aa14.49□□□□□ -0.09
SEC13-214ENST00000476597 INTS5Q6P9B9 1019 aaKnown RBP14.49□□□□□ -0.09
SEC13-214ENST00000476597 DNAJC10Q8IXB1 793 aa14.49□□□□□ -0.09
SEC13-214ENST00000476597 IL17REQ8NFR9 667 aa14.49□□□□□ -0.09
SEC13-214ENST00000476597 PHACTR3Q96KR7 559 aa14.49□□□□□ -0.09
SEC13-214ENST00000476597 UBR3Q6ZT12 1888 aa14.48□□□□□ -0.09
SEC13-214ENST00000476597 ZNF784Q8NCA9 323 aaPredicted RBP14.48□□□□□ -0.09
SEC13-214ENST00000476597 RSPH6AQ9H0K4 717 aa14.48□□□□□ -0.09
SEC13-214ENST00000476597 ZNF831Q5JPB2 1677 aa14.48□□□□□ -0.09
SEC13-214ENST00000476597 PRKAR2BP31323 418 aa14.47□□□□□ -0.09
SEC13-214ENST00000476597 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
SEC13-214ENST00000476597 FCHSD2O94868 740 aa14.46□□□□□ -0.09
SEC13-214ENST00000476597 U2AF1L5P0DN76 240 aaPredicted RBP14.46□□□□□ -0.09
SEC13-214ENST00000476597 CYP19A1P11511 503 aaPredicted RBP14.46□□□□□ -0.09
SEC13-214ENST00000476597 U2AF1Q01081 240 aaKnown RBP eCLIP14.46□□□□□ -0.09
SEC13-214ENST00000476597 CCDC87Q9NVE4 849 aa14.46□□□□□ -0.09
SEC13-214ENST00000476597 MRC1P22897 1456 aa14.45□□□□□ -0.1
SEC13-214ENST00000476597 TEFQ10587 303 aa14.45□□□□□ -0.1
SEC13-214ENST00000476597 ZNF790Q6PG37 636 aa14.44□□□□□ -0.1
SEC13-214ENST00000476597 TTC5Q8N0Z6 440 aa14.44□□□□□ -0.1
SEC13-214ENST00000476597 SRP68Q9UHB9 627 aaKnown RBP14.44□□□□□ -0.1
SEC13-214ENST00000476597 USP42Q9H9J4 1324 aaKnown RBP14.43□□□□□ -0.1
SEC13-214ENST00000476597 SCN11AQ9UI33 1791 aa14.43□□□□□ -0.1
SEC13-214ENST00000476597 TGFB2P61812 414 aa14.43□□□□□ -0.1
SEC13-214ENST00000476597 FKBP8Q14318 412 aa14.43□□□□□ -0.1
SEC13-214ENST00000476597 PARP3Q9Y6F1 533 aa14.43□□□□□ -0.1
SEC13-214ENST00000476597 SOS1Q07889 1333 aaPredicted RBP14.42□□□□□ -0.1
SEC13-214ENST00000476597 TM4SF1P30408 202 aa14.42□□□□□ -0.1
SEC13-214ENST00000476597 ZNF496Q96IT1 587 aaPredicted RBP14.42□□□□□ -0.1
SEC13-214ENST00000476597 ZBTB1Q9Y2K1 713 aa14.42□□□□□ -0.1
SEC13-214ENST00000476597 CEMIPQ8WUJ3 1361 aa14.42□□□□□ -0.1
SEC13-214ENST00000476597 ADAMTS7Q9UKP4 1686 aa14.42□□□□□ -0.1
SEC13-214ENST00000476597 KCPQ6ZWJ8 1503 aa14.41□□□□□ -0.1
SEC13-214ENST00000476597 ZPR1O75312 459 aa14.41□□□□□ -0.1
SEC13-214ENST00000476597 STARD3NLO95772 234 aa14.41□□□□□ -0.1
SEC13-214ENST00000476597 USPL1Q5W0Q7 1092 aa14.41□□□□□ -0.1
SEC13-214ENST00000476597 TEX13AQ9BXU3 409 aaPredicted RBP14.41□□□□□ -0.1
SEC13-214ENST00000476597 NARFQ9UHQ1 456 aa14.41□□□□□ -0.1
SEC13-214ENST00000476597 COL5A3P25940 1745 aaPredicted RBP14.41□□□□□ -0.1
SEC13-214ENST00000476597 MYH14Q7Z406 1995 aaKnown RBP14.4□□□□□ -0.1
SEC13-214ENST00000476597 HTATSF1O43719 755 aaKnown RBP14.4□□□□□ -0.1
SEC13-214ENST00000476597 HEG1Q9ULI3 1381 aa14.39□□□□□ -0.11
SEC13-214ENST00000476597 A0A0G2JLW4 131 aa14.39□□□□□ -0.11
SEC13-214ENST00000476597 BTBD11A6QL63 1104 aa14.39□□□□□ -0.11
SEC13-214ENST00000476597 KCNQ3O43525 872 aa14.39□□□□□ -0.11
SEC13-214ENST00000476597 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
SEC13-214ENST00000476597 EIF5P55010 431 aaKnown RBP14.39□□□□□ -0.11
SEC13-214ENST00000476597 DDR1Q08345 913 aa14.39□□□□□ -0.11
SEC13-214ENST00000476597 RTF1Q92541 710 aaKnown RBP14.39□□□□□ -0.11
SEC13-214ENST00000476597 FMNL2Q96PY5 1086 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms