RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 STK31Q9BXU1 1019 aa29.13■■■□□ 2.25
CCDC7-206ENST00000476558 PKD1L3Q7Z443 1732 aa29.12■■■□□ 2.25
CCDC7-206ENST00000476558 PRDM11Q9NQV5 511 aa29.12■■■□□ 2.25
CCDC7-206ENST00000476558 LTBP4Q8N2S1 1624 aa29.11■■■□□ 2.25
CCDC7-206ENST00000476558 BTBD11A6QL63 1104 aa29.11■■■□□ 2.25
CCDC7-206ENST00000476558 SPG7Q9UQ90 795 aa29.11■■■□□ 2.25
CCDC7-206ENST00000476558 SCN11AQ9UI33 1791 aa29.11■■■□□ 2.25
CCDC7-206ENST00000476558 KCNQ3O43525 872 aa29.1■■■□□ 2.25
CCDC7-206ENST00000476558 WDR17Q8IZU2 1322 aa29.1■■■□□ 2.25
CCDC7-206ENST00000476558 COL5A2P05997 1499 aaPredicted RBP29.09■■■□□ 2.25
CCDC7-206ENST00000476558 HEG1Q9ULI3 1381 aa29.09■■■□□ 2.25
CCDC7-206ENST00000476558 PHKG2P15735 406 aa29.08■■■□□ 2.25
CCDC7-206ENST00000476558 FAM161AQ3B820 660 aa29.08■■■□□ 2.25
CCDC7-206ENST00000476558 C8orf34Q49A92 452 aa29.08■■■□□ 2.25
CCDC7-206ENST00000476558 KDM6AO15550 1401 aaPredicted RBP29.07■■■□□ 2.24
CCDC7-206ENST00000476558 FLIIQ13045 1269 aa29.07■■■□□ 2.24
CCDC7-206ENST00000476558 SIRT2Q8IXJ6 389 aa29.06■■■□□ 2.24
CCDC7-206ENST00000476558 HDGFL1Q5TGJ6 251 aa29.06■■■□□ 2.24
CCDC7-206ENST00000476558 C1orf115Q9H7X2 142 aa29.06■■■□□ 2.24
CCDC7-206ENST00000476558 ROBO1Q9Y6N7 1651 aa29.05■■■□□ 2.24
CCDC7-206ENST00000476558 IFNL2Q8IZJ0 200 aa29.04■■■□□ 2.24
CCDC7-206ENST00000476558 CHMP4AQ9BY43 222 aa29.04■■■□□ 2.24
CCDC7-206ENST00000476558 NECTIN2Q92692 538 aa29.04■■■□□ 2.24
CCDC7-206ENST00000476558 AHDC1Q5TGY3 1603 aaPredicted RBP29.03■■■□□ 2.24
CCDC7-206ENST00000476558 CCT4P50991 539 aaKnown RBP29.03■■■□□ 2.24
CCDC7-206ENST00000476558 N4BP2Q86UW6 1770 aaPredicted RBP29.03■■■□□ 2.24
CCDC7-206ENST00000476558 F6X3S4 739 aa29.02■■■□□ 2.24
CCDC7-206ENST00000476558 CYP27B1O15528 508 aa29.02■■■□□ 2.24
CCDC7-206ENST00000476558 PARP4Q9UKK3 1724 aaKnown RBP29.02■■■□□ 2.24
CCDC7-206ENST00000476558 MRC1P22897 1456 aa29.01■■■□□ 2.23
CCDC7-206ENST00000476558 NUCB1Q02818 461 aa29.01■■■□□ 2.23
CCDC7-206ENST00000476558 SLC52A2Q9HAB3 445 aa29.01■■■□□ 2.23
CCDC7-206ENST00000476558 ATP10DQ9P241 1426 aa29■■■□□ 2.23
CCDC7-206ENST00000476558 GIGYF1O75420 1035 aaPredicted RBP28.99■■■□□ 2.23
CCDC7-206ENST00000476558 GCC1Q96CN9 775 aa28.99■■■□□ 2.23
CCDC7-206ENST00000476558 FKBP5Q13451 457 aaPredicted RBP28.99■■■□□ 2.23
CCDC7-206ENST00000476558 DCAF5Q96JK2 942 aa28.99■■■□□ 2.23
CCDC7-206ENST00000476558 CARD10Q9BWT7 1032 aa28.99■■■□□ 2.23
CCDC7-206ENST00000476558 PXDNLA1KZ92 1463 aa28.98■■■□□ 2.23
CCDC7-206ENST00000476558 TOM1L2Q6ZVM7 507 aa28.98■■■□□ 2.23
CCDC7-206ENST00000476558 MEIS3Q99687 375 aa28.98■■■□□ 2.23
CCDC7-206ENST00000476558 COL22A1Q8NFW1 1626 aaPredicted RBP28.96■■■□□ 2.23
CCDC7-206ENST00000476558 EIF2S2P20042 333 aaKnown RBP28.96■■■□□ 2.23
CCDC7-206ENST00000476558 SLC4A10Q6U841 1118 aa28.96■■■□□ 2.23
CCDC7-206ENST00000476558 ANKRD44Q8N8A2 993 aa28.96■■■□□ 2.23
CCDC7-206ENST00000476558 PHAXQ9H814 394 aaKnown RBP28.96■■■□□ 2.23
CCDC7-206ENST00000476558 HSP90AB1P08238 724 aaKnown RBP28.95■■■□□ 2.23
CCDC7-206ENST00000476558 RPAP2Q8IXW5 612 aaPredicted RBP28.95■■■□□ 2.23
CCDC7-206ENST00000476558 CHPF2Q9P2E5 772 aa28.94■■■□□ 2.22
CCDC7-206ENST00000476558 ZNF790Q6PG37 636 aa28.94■■■□□ 2.22
CCDC7-206ENST00000476558 NFATC2IPQ8NCF5 419 aa28.94■■■□□ 2.22
CCDC7-206ENST00000476558 MSH5O43196 834 aa28.93■■■□□ 2.22
CCDC7-206ENST00000476558 CEP85Q6P2H3 762 aa28.93■■■□□ 2.22
CCDC7-206ENST00000476558 CHD1LQ86WJ1 897 aa28.93■■■□□ 2.22
CCDC7-206ENST00000476558 LARP1Q6PKG0 1096 aaKnown RBP28.92■■■□□ 2.22
CCDC7-206ENST00000476558 ANP32AP39687 249 aaKnown RBP28.91■■■□□ 2.22
CCDC7-206ENST00000476558 ZCRB1Q8TBF4 217 aaKnown RBP28.91■■■□□ 2.22
CCDC7-206ENST00000476558 DBF4Q9UBU7 674 aaPredicted RBP28.91■■■□□ 2.22
CCDC7-206ENST00000476558 DCTPP1Q9H773 170 aa28.9■■■□□ 2.22
CCDC7-206ENST00000476558 SHANK3Q9BYB0 1731 aa28.9■■■□□ 2.22
CCDC7-206ENST00000476558 PCDH11XQ9BZA7 1347 aa28.89■■■□□ 2.22
CCDC7-206ENST00000476558 PCDH11YQ9BZA8 1340 aa28.89■■■□□ 2.22
CCDC7-206ENST00000476558 IL2RBP14784 551 aa28.89■■■□□ 2.22
CCDC7-206ENST00000476558 COL14A1Q05707 1796 aaKnown RBP28.89■■■□□ 2.21
CCDC7-206ENST00000476558 PRAMEF22A3QJZ6 481 aa28.88■■■□□ 2.21
CCDC7-206ENST00000476558 SLC39A6Q13433 755 aa28.88■■■□□ 2.21
CCDC7-206ENST00000476558 EVA1CP58658 441 aa28.87■■■□□ 2.21
CCDC7-206ENST00000476558 NKX1-1Q15270 411 aaPredicted RBP28.87■■■□□ 2.21
CCDC7-206ENST00000476558 STRN4Q9NRL3 753 aa28.87■■■□□ 2.21
CCDC7-206ENST00000476558 C5P01031 1676 aa28.87■■■□□ 2.21
CCDC7-206ENST00000476558 LNPKQ9C0E8 428 aa28.86■■■□□ 2.21
CCDC7-206ENST00000476558 COL16A1Q07092 1604 aaPredicted RBP28.85■■■□□ 2.21
CCDC7-206ENST00000476558 ANKRD45Q5TZF3 282 aa28.85■■■□□ 2.21
CCDC7-206ENST00000476558 GNAI3P08754 354 aa28.85■■■□□ 2.21
CCDC7-206ENST00000476558 GNAI2P04899 355 aa28.84■■■□□ 2.21
CCDC7-206ENST00000476558 IPO9Q96P70 1041 aaKnown RBP28.84■■■□□ 2.21
CCDC7-206ENST00000476558 ANXA1P04083 346 aa28.83■■■□□ 2.21
CCDC7-206ENST00000476558 PROSER3Q2NL68 480 aa28.83■■■□□ 2.21
CCDC7-206ENST00000476558 USP44Q9H0E7 712 aa28.83■■■□□ 2.21
CCDC7-206ENST00000476558 BTG4Q9NY30 223 aa28.83■■■□□ 2.21
CCDC7-206ENST00000476558 ADCY9O60503 1353 aa28.83■■■□□ 2.21
CCDC7-206ENST00000476558 CABP4P57796 275 aa28.83■■■□□ 2.21
CCDC7-206ENST00000476558 PDIA6Q15084 440 aa28.83■■■□□ 2.21
CCDC7-206ENST00000476558 ZNF496Q96IT1 587 aaPredicted RBP28.83■■■□□ 2.21
CCDC7-206ENST00000476558 DNAAF4Q8WXU2 420 aa28.82■■■□□ 2.2
CCDC7-206ENST00000476558 DDX21Q9NR30 783 aaKnown RBP eCLIP28.82■■■□□ 2.2
CCDC7-206ENST00000476558 HYPKQ9NX55 129 aa28.82■■■□□ 2.2
CCDC7-206ENST00000476558 PI4KAP2A4QPH2 592 aa28.81■■■□□ 2.2
CCDC7-206ENST00000476558 ERVV-2B6SEH9 535 aa28.81■■■□□ 2.2
CCDC7-206ENST00000476558 NPM2Q86SE8 214 aaKnown RBP28.81■■■□□ 2.2
CCDC7-206ENST00000476558 PI4KAP1Q8N8J0 262 aa28.81■■■□□ 2.2
CCDC7-206ENST00000476558 GLI3P10071 1580 aa28.81■■■□□ 2.2
CCDC7-206ENST00000476558 BEND3Q5T5X7 828 aa28.8■■■□□ 2.2
CCDC7-206ENST00000476558 SRCIN1Q9C0H9 1055 aa28.8■■■□□ 2.2
CCDC7-206ENST00000476558 PHLPP1O60346 1717 aa28.79■■■□□ 2.2
CCDC7-206ENST00000476558 HMMRO75330 724 aa28.78■■■□□ 2.2
CCDC7-206ENST00000476558 SEC24BO95487 1268 aa28.77■■■□□ 2.2
CCDC7-206ENST00000476558 SNRPA1P09661 255 aaKnown RBP28.77■■■□□ 2.2
CCDC7-206ENST00000476558 TTC5Q8N0Z6 440 aa28.77■■■□□ 2.2
CCDC7-206ENST00000476558 FMNL2Q96PY5 1086 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms