RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
RAB5A-208ENST00000476544 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
RAB5A-208ENST00000476544 ATF5Q9Y2D1 282 aaPredicted RBP18.3■□□□□ 0.52
RAB5A-208ENST00000476544 COL23A1Q86Y22 540 aaPredicted RBP18.29■□□□□ 0.52
RAB5A-208ENST00000476544 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
RAB5A-208ENST00000476544 SPON1Q9HCB6 807 aa18.28■□□□□ 0.52
RAB5A-208ENST00000476544 TFCP2L1Q9NZI6 479 aa18.28■□□□□ 0.52
RAB5A-208ENST00000476544 KAT6BQ8WYB5 2073 aa18.27■□□□□ 0.52
RAB5A-208ENST00000476544 SLC39A6Q13433 755 aa18.27■□□□□ 0.52
RAB5A-208ENST00000476544 GNAT3A8MTJ3 354 aa18.26■□□□□ 0.51
RAB5A-208ENST00000476544 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
RAB5A-208ENST00000476544 GAS2L2Q8NHY3 880 aa18.26■□□□□ 0.51
RAB5A-208ENST00000476544 MYBBP1AQ9BQG0 1328 aaKnown RBP18.25■□□□□ 0.51
RAB5A-208ENST00000476544 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
RAB5A-208ENST00000476544 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
RAB5A-208ENST00000476544 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
RAB5A-208ENST00000476544 CCDC184Q52MB2 194 aa18.23■□□□□ 0.51
RAB5A-208ENST00000476544 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
RAB5A-208ENST00000476544 CEMIPQ8WUJ3 1361 aa18.22■□□□□ 0.51
RAB5A-208ENST00000476544 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
RAB5A-208ENST00000476544 KCNQ3O43525 872 aa18.22■□□□□ 0.51
RAB5A-208ENST00000476544 LY75O60449 1722 aa18.22■□□□□ 0.51
RAB5A-208ENST00000476544 MCM10Q7L590 875 aa18.21■□□□□ 0.51
RAB5A-208ENST00000476544 SLC16A10Q8TF71 515 aa18.21■□□□□ 0.51
RAB5A-208ENST00000476544 ITGB4P16144 1822 aa18.21■□□□□ 0.51
RAB5A-208ENST00000476544 RC3H1Q5TC82 1133 aaKnown RBP18.2■□□□□ 0.5
RAB5A-208ENST00000476544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
RAB5A-208ENST00000476544 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
RAB5A-208ENST00000476544 DNAJC10Q8IXB1 793 aa18.19■□□□□ 0.5
RAB5A-208ENST00000476544 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
RAB5A-208ENST00000476544 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
RAB5A-208ENST00000476544 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
RAB5A-208ENST00000476544 GNPATO15228 680 aa18.17■□□□□ 0.5
RAB5A-208ENST00000476544 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
RAB5A-208ENST00000476544 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
RAB5A-208ENST00000476544 AK7Q96M32 723 aa18.17■□□□□ 0.5
RAB5A-208ENST00000476544 MRC1P22897 1456 aa18.16■□□□□ 0.5
RAB5A-208ENST00000476544 RPS6KA4O75676 772 aa18.16■□□□□ 0.5
RAB5A-208ENST00000476544 CRKLP46109 303 aaKnown RBP18.16■□□□□ 0.5
RAB5A-208ENST00000476544 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
RAB5A-208ENST00000476544 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
RAB5A-208ENST00000476544 LRP5O75197 1615 aa18.16■□□□□ 0.5
RAB5A-208ENST00000476544 ADAMTS7Q9UKP4 1686 aa18.15■□□□□ 0.5
RAB5A-208ENST00000476544 MSH5O43196 834 aa18.15■□□□□ 0.5
RAB5A-208ENST00000476544 PHF14O94880 888 aa18.15■□□□□ 0.5
RAB5A-208ENST00000476544 HMGB2P26583 209 aaKnown RBP18.15■□□□□ 0.5
RAB5A-208ENST00000476544 TEFQ10587 303 aa18.15■□□□□ 0.5
RAB5A-208ENST00000476544 FLAD1Q8NFF5 587 aa18.15■□□□□ 0.5
RAB5A-208ENST00000476544 ARHGEF1Q92888 912 aaKnown RBP18.15■□□□□ 0.5
RAB5A-208ENST00000476544 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
RAB5A-208ENST00000476544 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
RAB5A-208ENST00000476544 CNTNAP4Q9C0A0 1308 aa18.15■□□□□ 0.5
RAB5A-208ENST00000476544 SSFA2P28290 1259 aa18.14■□□□□ 0.49
RAB5A-208ENST00000476544 MSL1Q68DK7 614 aa18.14■□□□□ 0.49
RAB5A-208ENST00000476544 ARXQ96QS3 562 aa18.14■□□□□ 0.49
RAB5A-208ENST00000476544 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
RAB5A-208ENST00000476544 VSIG10Q8N0Z9 540 aa18.13■□□□□ 0.49
RAB5A-208ENST00000476544 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
RAB5A-208ENST00000476544 TMPOP42166 694 aaKnown RBP18.12■□□□□ 0.49
RAB5A-208ENST00000476544 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
RAB5A-208ENST00000476544 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
RAB5A-208ENST00000476544 RTF1Q92541 710 aaKnown RBP18.12■□□□□ 0.49
RAB5A-208ENST00000476544 SYT17Q9BSW7 474 aa18.12■□□□□ 0.49
RAB5A-208ENST00000476544 FHDC1Q9C0D6 1143 aaPredicted RBP18.12■□□□□ 0.49
RAB5A-208ENST00000476544 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
RAB5A-208ENST00000476544 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
RAB5A-208ENST00000476544 PPP1R1BQ9UD71 204 aaPredicted RBP18.11■□□□□ 0.49
RAB5A-208ENST00000476544 KCPQ6ZWJ8 1503 aa18.11■□□□□ 0.49
RAB5A-208ENST00000476544 C4BP0C0L5 1744 aa18.1■□□□□ 0.49
RAB5A-208ENST00000476544 RIPK4P57078 832 aa18.1■□□□□ 0.49
RAB5A-208ENST00000476544 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
RAB5A-208ENST00000476544 RRP7AQ9Y3A4 280 aaKnown RBP18.1■□□□□ 0.49
RAB5A-208ENST00000476544 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
RAB5A-208ENST00000476544 SCN11AQ9UI33 1791 aa18.09■□□□□ 0.49
RAB5A-208ENST00000476544 CCDC87Q9NVE4 849 aa18.09■□□□□ 0.49
RAB5A-208ENST00000476544 TRIM35Q9UPQ4 493 aa18.09■□□□□ 0.49
RAB5A-208ENST00000476544 RUNDC1Q96C34 613 aa18.08■□□□□ 0.48
RAB5A-208ENST00000476544 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.48
RAB5A-208ENST00000476544 ZBTB1Q9Y2K1 713 aa18.08■□□□□ 0.48
RAB5A-208ENST00000476544 HEG1Q9ULI3 1381 aa18.07■□□□□ 0.48
RAB5A-208ENST00000476544 A1BGP04217 495 aa18.07■□□□□ 0.48
RAB5A-208ENST00000476544 GYS1P13807 737 aa18.07■□□□□ 0.48
RAB5A-208ENST00000476544 ADRA2BP18089 450 aa18.07■□□□□ 0.48
RAB5A-208ENST00000476544 TTC5Q8N0Z6 440 aa18.07■□□□□ 0.48
RAB5A-208ENST00000476544 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
RAB5A-208ENST00000476544 FMNL2Q96PY5 1086 aa18.07■□□□□ 0.48
RAB5A-208ENST00000476544 C5P01031 1676 aa18.06■□□□□ 0.48
RAB5A-208ENST00000476544 SOS1Q07889 1333 aaPredicted RBP18.06■□□□□ 0.48
RAB5A-208ENST00000476544 POLD1P28340 1107 aa18.06■□□□□ 0.48
RAB5A-208ENST00000476544 WDR43Q15061 677 aaKnown RBP eCLIP18.06■□□□□ 0.48
RAB5A-208ENST00000476544 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
RAB5A-208ENST00000476544 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
RAB5A-208ENST00000476544 NEFMP07197 916 aa18.05■□□□□ 0.48
RAB5A-208ENST00000476544 EIF5P55010 431 aaKnown RBP18.05■□□□□ 0.48
RAB5A-208ENST00000476544 ZNF831Q5JPB2 1677 aa18.04■□□□□ 0.48
RAB5A-208ENST00000476544 STARD3NLO95772 234 aa18.04■□□□□ 0.48
RAB5A-208ENST00000476544 CANXP27824 592 aaKnown RBP18.04■□□□□ 0.48
RAB5A-208ENST00000476544 RFC4P35249 363 aa18.04■□□□□ 0.48
RAB5A-208ENST00000476544 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
RAB5A-208ENST00000476544 FKBP8Q14318 412 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms