RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 KIF20BQ96Q89 1820 aa22.95■■□□□ 1.26
APOBEC3F-203ENST00000476513 A0A0G2JLW4 131 aa22.94■■□□□ 1.26
APOBEC3F-203ENST00000476513 EYA1Q99502 592 aa22.94■■□□□ 1.26
APOBEC3F-203ENST00000476513 ATG3Q9NT62 314 aa22.94■■□□□ 1.26
APOBEC3F-203ENST00000476513 PHKG2P15735 406 aa22.93■■□□□ 1.26
APOBEC3F-203ENST00000476513 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
APOBEC3F-203ENST00000476513 WASHC2AQ641Q2 1341 aa22.92■■□□□ 1.26
APOBEC3F-203ENST00000476513 KIAA1551Q9HCM1 1747 aa22.92■■□□□ 1.26
APOBEC3F-203ENST00000476513 ARHGAP27Q6ZUM4 889 aa22.92■■□□□ 1.26
APOBEC3F-203ENST00000476513 NLGN1Q8N2Q7 840 aa22.92■■□□□ 1.26
APOBEC3F-203ENST00000476513 NMRK2Q9NPI5 230 aa22.92■■□□□ 1.26
APOBEC3F-203ENST00000476513 C10orf71Q711Q0 1435 aa22.91■■□□□ 1.26
APOBEC3F-203ENST00000476513 TRAPPC3LQ5T215 181 aa22.91■■□□□ 1.26
APOBEC3F-203ENST00000476513 RTCBQ9Y3I0 505 aaKnown RBP22.91■■□□□ 1.26
APOBEC3F-203ENST00000476513 KIF13BQ9NQT8 1826 aa22.91■■□□□ 1.26
APOBEC3F-203ENST00000476513 KDRP35968 1356 aa22.9■■□□□ 1.26
APOBEC3F-203ENST00000476513 DPEP1P16444 411 aa22.9■■□□□ 1.26
APOBEC3F-203ENST00000476513 CDCA8Q53HL2 280 aa22.9■■□□□ 1.26
APOBEC3F-203ENST00000476513 SLC4A9Q96Q91 983 aa22.89■■□□□ 1.25
APOBEC3F-203ENST00000476513 N4BP2Q86UW6 1770 aaPredicted RBP22.89■■□□□ 1.25
APOBEC3F-203ENST00000476513 FCHSD2O94868 740 aa22.88■■□□□ 1.25
APOBEC3F-203ENST00000476513 ARHGEF1Q92888 912 aaKnown RBP22.88■■□□□ 1.25
APOBEC3F-203ENST00000476513 CCDC87Q9NVE4 849 aa22.88■■□□□ 1.25
APOBEC3F-203ENST00000476513 GYS1P13807 737 aa22.86■■□□□ 1.25
APOBEC3F-203ENST00000476513 ADRA2BP18089 450 aa22.86■■□□□ 1.25
APOBEC3F-203ENST00000476513 RC3H1Q5TC82 1133 aaKnown RBP22.86■■□□□ 1.25
APOBEC3F-203ENST00000476513 RBM42Q9BTD8 480 aaKnown RBP22.86■■□□□ 1.25
APOBEC3F-203ENST00000476513 ANKRD26Q9UPS8 1709 aa22.85■■□□□ 1.25
APOBEC3F-203ENST00000476513 RBM46Q8TBY0 533 aaKnown RBP22.85■■□□□ 1.25
APOBEC3F-203ENST00000476513 POLKQ9UBT6 870 aa22.85■■□□□ 1.25
APOBEC3F-203ENST00000476513 C9orf131Q5VYM1 1079 aa22.84■■□□□ 1.25
APOBEC3F-203ENST00000476513 PARP3Q9Y6F1 533 aa22.84■■□□□ 1.25
APOBEC3F-203ENST00000476513 CNTNAP4Q9C0A0 1308 aa22.83■■□□□ 1.25
APOBEC3F-203ENST00000476513 RPS6KA4O75676 772 aa22.83■■□□□ 1.25
APOBEC3F-203ENST00000476513 KCNA3P22001 575 aa22.83■■□□□ 1.25
APOBEC3F-203ENST00000476513 RFC4P35249 363 aa22.83■■□□□ 1.25
APOBEC3F-203ENST00000476513 C4AP0C0L4 1744 aa22.82■■□□□ 1.24
APOBEC3F-203ENST00000476513 ERVV-2B6SEH9 535 aa22.82■■□□□ 1.24
APOBEC3F-203ENST00000476513 EIF4A2Q14240 407 aaKnown RBP22.82■■□□□ 1.24
APOBEC3F-203ENST00000476513 HTRA3P83110 453 aa22.81■■□□□ 1.24
APOBEC3F-203ENST00000476513 C16orf71Q8IYS4 520 aaPredicted RBP22.81■■□□□ 1.24
APOBEC3F-203ENST00000476513 PLEKHG2Q9H7P9 1386 aa22.8■■□□□ 1.24
APOBEC3F-203ENST00000476513 KLRG1Q96E93 195 aa22.8■■□□□ 1.24
APOBEC3F-203ENST00000476513 ZNF831Q5JPB2 1677 aa22.8■■□□□ 1.24
APOBEC3F-203ENST00000476513 FSTL1Q12841 308 aa22.79■■□□□ 1.24
APOBEC3F-203ENST00000476513 DCAF5Q96JK2 942 aa22.79■■□□□ 1.24
APOBEC3F-203ENST00000476513 PIM2Q9P1W9 311 aa22.79■■□□□ 1.24
APOBEC3F-203ENST00000476513 JMYQ8N9B5 988 aa22.78■■□□□ 1.24
APOBEC3F-203ENST00000476513 WDR90Q96KV7 1748 aa22.78■■□□□ 1.24
APOBEC3F-203ENST00000476513 BRCA1P38398 1863 aaKnown RBP22.77■■□□□ 1.24
APOBEC3F-203ENST00000476513 HSP90AB1P08238 724 aaKnown RBP22.77■■□□□ 1.24
APOBEC3F-203ENST00000476513 COL5A3P25940 1745 aaPredicted RBP22.77■■□□□ 1.23
APOBEC3F-203ENST00000476513 DALRD3Q5D0E6 543 aaKnown RBP22.76■■□□□ 1.23
APOBEC3F-203ENST00000476513 COL13A1Q5TAT6 717 aaPredicted RBP22.76■■□□□ 1.23
APOBEC3F-203ENST00000476513 RNF181Q9P0P0 153 aa22.76■■□□□ 1.23
APOBEC3F-203ENST00000476513 SRP68Q9UHB9 627 aaKnown RBP22.76■■□□□ 1.23
APOBEC3F-203ENST00000476513 KCPQ6ZWJ8 1503 aa22.76■■□□□ 1.23
APOBEC3F-203ENST00000476513 KDM2BQ8NHM5 1336 aa22.76■■□□□ 1.23
APOBEC3F-203ENST00000476513 KDM6AO15550 1401 aaPredicted RBP22.75■■□□□ 1.23
APOBEC3F-203ENST00000476513 TNNT2P45379 298 aaPredicted RBP22.75■■□□□ 1.23
APOBEC3F-203ENST00000476513 CABP4P57796 275 aa22.75■■□□□ 1.23
APOBEC3F-203ENST00000476513 CRKLP46109 303 aaKnown RBP22.74■■□□□ 1.23
APOBEC3F-203ENST00000476513 DDR1Q08345 913 aa22.74■■□□□ 1.23
APOBEC3F-203ENST00000476513 FKBP8Q14318 412 aa22.74■■□□□ 1.23
APOBEC3F-203ENST00000476513 PLEKHO1Q53GL0 409 aaPredicted RBP22.74■■□□□ 1.23
APOBEC3F-203ENST00000476513 RRAGCQ9HB90 399 aa22.74■■□□□ 1.23
APOBEC3F-203ENST00000476513 ARFGEF1Q9Y6D6 1849 aa22.73■■□□□ 1.23
APOBEC3F-203ENST00000476513 PTCD1O75127 700 aaKnown RBP22.73■■□□□ 1.23
APOBEC3F-203ENST00000476513 ZNF530Q6P9A1 599 aaPredicted RBP22.73■■□□□ 1.23
APOBEC3F-203ENST00000476513 MYH14Q7Z406 1995 aaKnown RBP22.72■■□□□ 1.23
APOBEC3F-203ENST00000476513 CHRNA5P30532 468 aa22.72■■□□□ 1.23
APOBEC3F-203ENST00000476513 USP42Q9H9J4 1324 aaKnown RBP22.72■■□□□ 1.23
APOBEC3F-203ENST00000476513 AMOTQ4VCS5 1084 aa22.7■■□□□ 1.22
APOBEC3F-203ENST00000476513 MTHFSP49914 203 aa22.69■■□□□ 1.22
APOBEC3F-203ENST00000476513 POLRMTO00411 1230 aaKnown RBP22.67■■□□□ 1.22
APOBEC3F-203ENST00000476513 TM4SF1P30408 202 aa22.67■■□□□ 1.22
APOBEC3F-203ENST00000476513 NFATC2IPQ8NCF5 419 aa22.67■■□□□ 1.22
APOBEC3F-203ENST00000476513 SMC1BQ8NDV3 1235 aa22.67■■□□□ 1.22
APOBEC3F-203ENST00000476513 INTS5Q6P9B9 1019 aaKnown RBP22.66■■□□□ 1.22
APOBEC3F-203ENST00000476513 CAPN15O75808 1086 aa22.65■■□□□ 1.22
APOBEC3F-203ENST00000476513 C1orf141Q5JVX7 400 aa22.65■■□□□ 1.22
APOBEC3F-203ENST00000476513 AEBP1Q8IUX7 1158 aa22.65■■□□□ 1.22
APOBEC3F-203ENST00000476513 TNS4Q8IZW8 715 aa22.64■■□□□ 1.21
APOBEC3F-203ENST00000476513 TNRC6CQ9HCJ0 1690 aaKnown RBP22.63■■□□□ 1.21
APOBEC3F-203ENST00000476513 RASSF7Q02833 373 aa22.63■■□□□ 1.21
APOBEC3F-203ENST00000476513 POLR3GLQ9BT43 218 aa22.63■■□□□ 1.21
APOBEC3F-203ENST00000476513 ZC3H4Q9UPT8 1303 aaKnown RBP22.62■■□□□ 1.21
APOBEC3F-203ENST00000476513 USPL1Q5W0Q7 1092 aa22.62■■□□□ 1.21
APOBEC3F-203ENST00000476513 TJP1Q07157 1748 aa22.62■■□□□ 1.21
APOBEC3F-203ENST00000476513 ZPR1O75312 459 aa22.61■■□□□ 1.21
APOBEC3F-203ENST00000476513 SBF1O95248 1867 aa22.61■■□□□ 1.21
APOBEC3F-203ENST00000476513 ADAMTS7Q9UKP4 1686 aa22.61■■□□□ 1.21
APOBEC3F-203ENST00000476513 PRELPP51888 382 aa22.6■■□□□ 1.21
APOBEC3F-203ENST00000476513 DNAJC10Q8IXB1 793 aa22.6■■□□□ 1.21
APOBEC3F-203ENST00000476513 SOS1Q07889 1333 aaPredicted RBP22.59■■□□□ 1.21
APOBEC3F-203ENST00000476513 GLTPD2A6NH11 291 aa22.59■■□□□ 1.21
APOBEC3F-203ENST00000476513 LMNB1P20700 586 aa22.59■■□□□ 1.21
APOBEC3F-203ENST00000476513 VEGFAP15692 232 aaPredicted RBP22.58■■□□□ 1.21
APOBEC3F-203ENST00000476513 NFIXQ14938 502 aa22.58■■□□□ 1.21
APOBEC3F-203ENST00000476513 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms