RNA–Protein interactions for RNA: ENST00000476477.6

ECHDC2-208, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 1,676 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-208ENST00000476477 STK31Q9BXU1 1019 aa22.6■■□□□ 1.21
ECHDC2-208ENST00000476477 LTBP4Q8N2S1 1624 aa22.6■■□□□ 1.21
ECHDC2-208ENST00000476477 PKD1L3Q7Z443 1732 aa22.58■■□□□ 1.21
ECHDC2-208ENST00000476477 COL5A2P05997 1499 aaPredicted RBP22.58■■□□□ 1.21
ECHDC2-208ENST00000476477 ROBO1Q9Y6N7 1651 aa22.58■■□□□ 1.21
ECHDC2-208ENST00000476477 KDM6AO15550 1401 aaPredicted RBP22.58■■□□□ 1.2
ECHDC2-208ENST00000476477 PHKG2P15735 406 aa22.58■■□□□ 1.2
ECHDC2-208ENST00000476477 SPG7Q9UQ90 795 aa22.58■■□□□ 1.2
ECHDC2-208ENST00000476477 WDR17Q8IZU2 1322 aa22.57■■□□□ 1.2
ECHDC2-208ENST00000476477 SCN11AQ9UI33 1791 aa22.57■■□□□ 1.2
ECHDC2-208ENST00000476477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.57■■□□□ 1.24e-7■□□□□ 10.6
ECHDC2-208ENST00000476477 CACNA1FO60840 1977 aa22.57■■□□□ 1.2
ECHDC2-208ENST00000476477 F6X3S4 739 aa22.56■■□□□ 1.2
ECHDC2-208ENST00000476477 HDGFL1Q5TGJ6 251 aa22.56■■□□□ 1.2
ECHDC2-208ENST00000476477 SMC5Q8IY18 1101 aa22.56■■□□□ 1.2
ECHDC2-208ENST00000476477 FLIIQ13045 1269 aa22.55■■□□□ 1.2
ECHDC2-208ENST00000476477 PLEKHG2Q9H7P9 1386 aa22.55■■□□□ 1.2
ECHDC2-208ENST00000476477 FAM161AQ3B820 660 aa22.54■■□□□ 1.2
ECHDC2-208ENST00000476477 C8orf34Q49A92 452 aa22.54■■□□□ 1.2
ECHDC2-208ENST00000476477 TOM1L2Q6ZVM7 507 aa22.54■■□□□ 1.2
ECHDC2-208ENST00000476477 SIRT2Q8IXJ6 389 aa22.54■■□□□ 1.2
ECHDC2-208ENST00000476477 IFNL2Q8IZJ0 200 aa22.54■■□□□ 1.2
ECHDC2-208ENST00000476477 CYP27B1O15528 508 aa22.53■■□□□ 1.2
ECHDC2-208ENST00000476477 HOXB7P09629 217 aa22.53■■□□□ 1.2
ECHDC2-208ENST00000476477 EIF2S2P20042 333 aaKnown RBP22.53■■□□□ 1.2
ECHDC2-208ENST00000476477 AHDC1Q5TGY3 1603 aaPredicted RBP22.53■■□□□ 1.2
ECHDC2-208ENST00000476477 SLC4A10Q6U841 1118 aa22.52■■□□□ 1.2
ECHDC2-208ENST00000476477 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
ECHDC2-208ENST00000476477 HEG1Q9ULI3 1381 aa22.51■■□□□ 1.19
ECHDC2-208ENST00000476477 FKBP5Q13451 457 aaPredicted RBP22.51■■□□□ 1.19
ECHDC2-208ENST00000476477 MEIS3Q99687 375 aa22.51■■□□□ 1.19
ECHDC2-208ENST00000476477 PHAXQ9H814 394 aaKnown RBP22.5■■□□□ 1.19
ECHDC2-208ENST00000476477 SLC52A2Q9HAB3 445 aa22.5■■□□□ 1.19
ECHDC2-208ENST00000476477 CCT4P50991 539 aaKnown RBP22.49■■□□□ 1.19
ECHDC2-208ENST00000476477 LARP1Q6PKG0 1096 aaKnown RBP22.49■■□□□ 1.19
ECHDC2-208ENST00000476477 STRN4Q9NRL3 753 aa22.49■■□□□ 1.19
ECHDC2-208ENST00000476477 ATP10DQ9P241 1426 aa22.49■■□□□ 1.19
ECHDC2-208ENST00000476477 CARD10Q9BWT7 1032 aa22.49■■□□□ 1.19
ECHDC2-208ENST00000476477 CHPF2Q9P2E5 772 aa22.49■■□□□ 1.19
ECHDC2-208ENST00000476477 MRC1P22897 1456 aa22.48■■□□□ 1.19
ECHDC2-208ENST00000476477 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
ECHDC2-208ENST00000476477 PRAMEF22A3QJZ6 481 aa22.47■■□□□ 1.19
ECHDC2-208ENST00000476477 SLC39A6Q13433 755 aa22.47■■□□□ 1.19
ECHDC2-208ENST00000476477 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
ECHDC2-208ENST00000476477 N4BP2Q86UW6 1770 aaPredicted RBP22.47■■□□□ 1.19
ECHDC2-208ENST00000476477 EVA1CP58658 441 aa22.46■■□□□ 1.19
ECHDC2-208ENST00000476477 NUCB1Q02818 461 aa22.46■■□□□ 1.19
ECHDC2-208ENST00000476477 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
ECHDC2-208ENST00000476477 MSH5O43196 834 aa22.46■■□□□ 1.19
ECHDC2-208ENST00000476477 ANXA1P04083 346 aa22.46■■□□□ 1.19
ECHDC2-208ENST00000476477 COL22A1Q8NFW1 1626 aaPredicted RBP22.45■■□□□ 1.18
ECHDC2-208ENST00000476477 NPM2Q86SE8 214 aaKnown RBP22.45■■□□□ 1.18
ECHDC2-208ENST00000476477 ANKRD44Q8N8A2 993 aa22.45■■□□□ 1.18
ECHDC2-208ENST00000476477 ZCRB1Q8TBF4 217 aaKnown RBP22.45■■□□□ 1.18
ECHDC2-208ENST00000476477 GCC1Q96CN9 775 aa22.45■■□□□ 1.18
ECHDC2-208ENST00000476477 PXDNLA1KZ92 1463 aa22.44■■□□□ 1.18
ECHDC2-208ENST00000476477 HSP90AB1P08238 724 aaKnown RBP22.44■■□□□ 1.18
ECHDC2-208ENST00000476477 CEP85Q6P2H3 762 aa22.44■■□□□ 1.18
ECHDC2-208ENST00000476477 ZNF790Q6PG37 636 aa22.44■■□□□ 1.18
ECHDC2-208ENST00000476477 IL2RBP14784 551 aa22.43■■□□□ 1.18
ECHDC2-208ENST00000476477 CHMP4AQ9BY43 222 aa22.43■■□□□ 1.18
ECHDC2-208ENST00000476477 SHANK3Q9BYB0 1731 aa22.43■■□□□ 1.18
ECHDC2-208ENST00000476477 C5P01031 1676 aa22.43■■□□□ 1.18
ECHDC2-208ENST00000476477 COL16A1Q07092 1604 aaPredicted RBP22.43■■□□□ 1.18
ECHDC2-208ENST00000476477 CHD1LQ86WJ1 897 aa22.42■■□□□ 1.18
ECHDC2-208ENST00000476477 LNPKQ9C0E8 428 aa22.42■■□□□ 1.18
ECHDC2-208ENST00000476477 PCDH11XQ9BZA7 1347 aa22.42■■□□□ 1.18
ECHDC2-208ENST00000476477 PCDH11YQ9BZA8 1340 aa22.42■■□□□ 1.18
ECHDC2-208ENST00000476477 COL14A1Q05707 1796 aaKnown RBP22.42■■□□□ 1.18
ECHDC2-208ENST00000476477 ANP32AP39687 249 aaKnown RBP22.42■■□□□ 1.18
ECHDC2-208ENST00000476477 BTG4Q9NY30 223 aa22.42■■□□□ 1.18
ECHDC2-208ENST00000476477 PROSER3Q2NL68 480 aa22.41■■□□□ 1.18
ECHDC2-208ENST00000476477 ANKRD45Q5TZF3 282 aa22.41■■□□□ 1.18
ECHDC2-208ENST00000476477 RPAP2Q8IXW5 612 aaPredicted RBP22.41■■□□□ 1.18
ECHDC2-208ENST00000476477 CABP4P57796 275 aa22.39■■□□□ 1.18
ECHDC2-208ENST00000476477 DBF4Q9UBU7 674 aaPredicted RBP22.39■■□□□ 1.18
ECHDC2-208ENST00000476477 PHLPP1O60346 1717 aa22.39■■□□□ 1.18
ECHDC2-208ENST00000476477 DCTPP1Q9H773 170 aa22.39■■□□□ 1.17
ECHDC2-208ENST00000476477 ZNF496Q96IT1 587 aaPredicted RBP22.38■■□□□ 1.17
ECHDC2-208ENST00000476477 ADCY9O60503 1353 aa22.38■■□□□ 1.17
ECHDC2-208ENST00000476477 USP35Q9P2H5 1018 aa22.37■■□□□ 1.17
ECHDC2-208ENST00000476477 PI4KAP2A4QPH2 592 aa22.36■■□□□ 1.17
ECHDC2-208ENST00000476477 GNAI2P04899 355 aa22.36■■□□□ 1.17
ECHDC2-208ENST00000476477 PI4KAP1Q8N8J0 262 aa22.36■■□□□ 1.17
ECHDC2-208ENST00000476477 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
ECHDC2-208ENST00000476477 GNAI3P08754 354 aa22.36■■□□□ 1.17
ECHDC2-208ENST00000476477 NKX1-1Q15270 411 aaPredicted RBP22.36■■□□□ 1.17
ECHDC2-208ENST00000476477 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
ECHDC2-208ENST00000476477 GLI3P10071 1580 aa22.35■■□□□ 1.17
ECHDC2-208ENST00000476477 PDIA6Q15084 440 aa22.35■■□□□ 1.17
ECHDC2-208ENST00000476477 TTC5Q8N0Z6 440 aa22.35■■□□□ 1.17
ECHDC2-208ENST00000476477 USP44Q9H0E7 712 aa22.35■■□□□ 1.17
ECHDC2-208ENST00000476477 BEND3Q5T5X7 828 aa22.34■■□□□ 1.17
ECHDC2-208ENST00000476477 SRCIN1Q9C0H9 1055 aa22.34■■□□□ 1.17
ECHDC2-208ENST00000476477 DDX21Q9NR30 783 aaKnown RBP eCLIP22.34■■□□□ 1.17
ECHDC2-208ENST00000476477 SEC24BO95487 1268 aa22.33■■□□□ 1.17
ECHDC2-208ENST00000476477 HYPKQ9NX55 129 aa22.33■■□□□ 1.17
ECHDC2-208ENST00000476477 IPO9Q96P70 1041 aaKnown RBP22.33■■□□□ 1.16
ECHDC2-208ENST00000476477 FMNL2Q96PY5 1086 aa22.33■■□□□ 1.16
ECHDC2-208ENST00000476477 ERVV-2B6SEH9 535 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms