RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 AK7Q96M32 723 aa24.1■■□□□ 1.45
RAPGEF3-208ENST00000476259 ARXQ96QS3 562 aa24.1■■□□□ 1.45
RAPGEF3-208ENST00000476259 U2SURPO15042 1029 aaKnown RBP24.09■■□□□ 1.45
RAPGEF3-208ENST00000476259 ATP6V1AP38606 617 aa24.09■■□□□ 1.45
RAPGEF3-208ENST00000476259 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
RAPGEF3-208ENST00000476259 FHDC1Q9C0D6 1143 aaPredicted RBP24.09■■□□□ 1.45
RAPGEF3-208ENST00000476259 LINC00116Q8NCU8 138 aa24.08■■□□□ 1.45
RAPGEF3-208ENST00000476259 CFAP53Q96M91 514 aa24.08■■□□□ 1.45
RAPGEF3-208ENST00000476259 ADAMTS7Q9UKP4 1686 aa24.08■■□□□ 1.44
RAPGEF3-208ENST00000476259 POLD1P28340 1107 aa24.07■■□□□ 1.44
RAPGEF3-208ENST00000476259 ITPK1Q13572 414 aa24.07■■□□□ 1.44
RAPGEF3-208ENST00000476259 FLAD1Q8NFF5 587 aa24.07■■□□□ 1.44
RAPGEF3-208ENST00000476259 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
RAPGEF3-208ENST00000476259 NFATC2IPQ8NCF5 419 aa24.06■■□□□ 1.44
RAPGEF3-208ENST00000476259 RBM42Q9BTD8 480 aaKnown RBP24.06■■□□□ 1.44
RAPGEF3-208ENST00000476259 MTHFSDQ2M296 383 aaKnown RBP24.05■■□□□ 1.44
RAPGEF3-208ENST00000476259 SYT17Q9BSW7 474 aa24.05■■□□□ 1.44
RAPGEF3-208ENST00000476259 AMIGO3Q86WK7 504 aa24.04■■□□□ 1.44
RAPGEF3-208ENST00000476259 MRC1P22897 1456 aa24.04■■□□□ 1.44
RAPGEF3-208ENST00000476259 CICQ96RK0 1608 aaPredicted RBP24.03■■□□□ 1.44
RAPGEF3-208ENST00000476259 DCAF8L1A6NGE4 600 aa24.03■■□□□ 1.44
RAPGEF3-208ENST00000476259 PHF14O94880 888 aa24.03■■□□□ 1.44
RAPGEF3-208ENST00000476259 TJP1Q07157 1748 aa24.03■■□□□ 1.44
RAPGEF3-208ENST00000476259 MSL1Q68DK7 614 aa24.02■■□□□ 1.44
RAPGEF3-208ENST00000476259 SLC4A9Q96Q91 983 aa24.02■■□□□ 1.44
RAPGEF3-208ENST00000476259 LGR6Q9HBX8 967 aa24.02■■□□□ 1.44
RAPGEF3-208ENST00000476259 MAP3K5Q99683 1374 aa24.02■■□□□ 1.44
RAPGEF3-208ENST00000476259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.01■■□□□ 1.43
RAPGEF3-208ENST00000476259 RNMTO43148 476 aaKnown RBP24.01■■□□□ 1.43
RAPGEF3-208ENST00000476259 SSFA2P28290 1259 aa24.01■■□□□ 1.43
RAPGEF3-208ENST00000476259 SMIM5Q71RC9 77 aa24.01■■□□□ 1.43
RAPGEF3-208ENST00000476259 SLC52A2Q9HAB3 445 aa24.01■■□□□ 1.43
RAPGEF3-208ENST00000476259 MYH14Q7Z406 1995 aaKnown RBP24.01■■□□□ 1.43
RAPGEF3-208ENST00000476259 GNPATO15228 680 aa24■■□□□ 1.43
RAPGEF3-208ENST00000476259 KLHL34Q8N239 644 aa24■■□□□ 1.43
RAPGEF3-208ENST00000476259 SIPA1L3O60292 1781 aaPredicted RBP23.99■■□□□ 1.43
RAPGEF3-208ENST00000476259 PTCD1O75127 700 aaKnown RBP23.99■■□□□ 1.43
RAPGEF3-208ENST00000476259 NUDCQ9Y266 331 aa23.99■■□□□ 1.43
RAPGEF3-208ENST00000476259 C4AP0C0L4 1744 aa23.97■■□□□ 1.43
RAPGEF3-208ENST00000476259 UBR2Q8IWV8 1755 aa23.97■■□□□ 1.43
RAPGEF3-208ENST00000476259 GAS2L2Q8NHY3 880 aa23.96■■□□□ 1.43
RAPGEF3-208ENST00000476259 PRKAR2BP31323 418 aa23.95■■□□□ 1.42
RAPGEF3-208ENST00000476259 RSPH6AQ9H0K4 717 aa23.95■■□□□ 1.42
RAPGEF3-208ENST00000476259 CNTNAP4Q9C0A0 1308 aa23.94■■□□□ 1.42
RAPGEF3-208ENST00000476259 U2AF1L5P0DN76 240 aaPredicted RBP23.94■■□□□ 1.42
RAPGEF3-208ENST00000476259 U2AF1Q01081 240 aaKnown RBP eCLIP23.94■■□□□ 1.42
RAPGEF3-208ENST00000476259 RC3H1Q5TC82 1133 aaKnown RBP23.94■■□□□ 1.42
RAPGEF3-208ENST00000476259 RTCBQ9Y3I0 505 aaKnown RBP23.94■■□□□ 1.42
RAPGEF3-208ENST00000476259 GNAT3A8MTJ3 354 aa23.93■■□□□ 1.42
RAPGEF3-208ENST00000476259 KCPQ6ZWJ8 1503 aa23.93■■□□□ 1.42
RAPGEF3-208ENST00000476259 SLC39A6Q13433 755 aa23.92■■□□□ 1.42
RAPGEF3-208ENST00000476259 PHACTR3Q96KR7 559 aa23.92■■□□□ 1.42
RAPGEF3-208ENST00000476259 CHD4Q14839 1912 aa23.91■■□□□ 1.42
RAPGEF3-208ENST00000476259 TRAPPC3LQ5T215 181 aa23.9■■□□□ 1.42
RAPGEF3-208ENST00000476259 DLG5Q8TDM6 1919 aa23.9■■□□□ 1.42
RAPGEF3-208ENST00000476259 RPS6KA4O75676 772 aa23.89■■□□□ 1.41
RAPGEF3-208ENST00000476259 CRKLP46109 303 aaKnown RBP23.89■■□□□ 1.41
RAPGEF3-208ENST00000476259 DDX10Q13206 875 aaKnown RBP23.89■■□□□ 1.41
RAPGEF3-208ENST00000476259 IL17REQ8NFR9 667 aa23.89■■□□□ 1.41
RAPGEF3-208ENST00000476259 NLGN2Q8NFZ4 835 aa23.89■■□□□ 1.41
RAPGEF3-208ENST00000476259 FCHSD2O94868 740 aa23.88■■□□□ 1.41
RAPGEF3-208ENST00000476259 ADRA2BP18089 450 aa23.88■■□□□ 1.41
RAPGEF3-208ENST00000476259 TEFQ10587 303 aa23.88■■□□□ 1.41
RAPGEF3-208ENST00000476259 DNAJC10Q8IXB1 793 aa23.87■■□□□ 1.41
RAPGEF3-208ENST00000476259 ARHGEF1Q92888 912 aaKnown RBP23.87■■□□□ 1.41
RAPGEF3-208ENST00000476259 YY1P25490 414 aa23.85■■□□□ 1.41
RAPGEF3-208ENST00000476259 RFC4P35249 363 aa23.85■■□□□ 1.41
RAPGEF3-208ENST00000476259 CEMIPQ8WUJ3 1361 aa23.85■■□□□ 1.41
RAPGEF3-208ENST00000476259 GPR162Q16538 588 aa23.84■■□□□ 1.41
RAPGEF3-208ENST00000476259 TTC5Q8N0Z6 440 aa23.84■■□□□ 1.41
RAPGEF3-208ENST00000476259 KIF13BQ9NQT8 1826 aa23.83■■□□□ 1.41
RAPGEF3-208ENST00000476259 RALBP1Q15311 655 aa23.83■■□□□ 1.41
RAPGEF3-208ENST00000476259 CD2APQ9Y5K6 639 aa23.83■■□□□ 1.41
RAPGEF3-208ENST00000476259 INTS5Q6P9B9 1019 aaKnown RBP23.82■■□□□ 1.4
RAPGEF3-208ENST00000476259 PELP1Q8IZL8 1130 aaKnown RBP23.82■■□□□ 1.4
RAPGEF3-208ENST00000476259 VSIG10Q8N0Z9 540 aa23.82■■□□□ 1.4
RAPGEF3-208ENST00000476259 CCDC87Q9NVE4 849 aa23.82■■□□□ 1.4
RAPGEF3-208ENST00000476259 CYP19A1P11511 503 aaPredicted RBP23.81■■□□□ 1.4
RAPGEF3-208ENST00000476259 NLGN1Q8N2Q7 840 aa23.81■■□□□ 1.4
RAPGEF3-208ENST00000476259 MMP10P09238 476 aa23.8■■□□□ 1.4
RAPGEF3-208ENST00000476259 GYS1P13807 737 aa23.8■■□□□ 1.4
RAPGEF3-208ENST00000476259 ZNF790Q6PG37 636 aa23.8■■□□□ 1.4
RAPGEF3-208ENST00000476259 RTF1Q92541 710 aaKnown RBP23.8■■□□□ 1.4
RAPGEF3-208ENST00000476259 NEFMP07197 916 aa23.79■■□□□ 1.4
RAPGEF3-208ENST00000476259 UTRNP46939 3433 aa23.78■■□□□ 1.4
RAPGEF3-208ENST00000476259 MCM10Q7L590 875 aa23.78■■□□□ 1.4
RAPGEF3-208ENST00000476259 ZNF496Q96IT1 587 aaPredicted RBP23.78■■□□□ 1.4
RAPGEF3-208ENST00000476259 USP42Q9H9J4 1324 aaKnown RBP23.78■■□□□ 1.4
RAPGEF3-208ENST00000476259 HEG1Q9ULI3 1381 aa23.78■■□□□ 1.4
RAPGEF3-208ENST00000476259 KIAA1551Q9HCM1 1747 aa23.77■■□□□ 1.4
RAPGEF3-208ENST00000476259 SRP68Q9UHB9 627 aaKnown RBP23.77■■□□□ 1.4
RAPGEF3-208ENST00000476259 N4BP2Q86UW6 1770 aaPredicted RBP23.77■■□□□ 1.4
RAPGEF3-208ENST00000476259 SOS1Q07889 1333 aaPredicted RBP23.77■■□□□ 1.4
RAPGEF3-208ENST00000476259 BTBD11A6QL63 1104 aa23.76■■□□□ 1.39
RAPGEF3-208ENST00000476259 ZBTB1Q9Y2K1 713 aa23.76■■□□□ 1.39
RAPGEF3-208ENST00000476259 HTATSF1O43719 755 aaKnown RBP23.75■■□□□ 1.39
RAPGEF3-208ENST00000476259 DCTN1Q14203 1278 aa23.75■■□□□ 1.39
RAPGEF3-208ENST00000476259 MYBBP1AQ9BQG0 1328 aaKnown RBP23.75■■□□□ 1.39
RAPGEF3-208ENST00000476259 GOLGB1Q14789 3259 aaKnown RBP23.75■■□□□ 1.39
RAPGEF3-208ENST00000476259 COL15A1P39059 1388 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms