RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TTC22Q5TAA0 569 aa20.66■□□□□ 0.9
TVP23B-202ENST00000476139 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
TVP23B-202ENST00000476139 KIF2CQ99661 725 aa20.66■□□□□ 0.9
TVP23B-202ENST00000476139 GNAI2P04899 355 aa20.66■□□□□ 0.9
TVP23B-202ENST00000476139 ANKRD24Q8TF21 1146 aa20.65■□□□□ 0.9
TVP23B-202ENST00000476139 BABAM1Q9NWV8 329 aa20.65■□□□□ 0.9
TVP23B-202ENST00000476139 EIF4A1P60842 406 aaKnown RBP20.65■□□□□ 0.9
TVP23B-202ENST00000476139 EXOC6BQ9Y2D4 811 aa20.65■□□□□ 0.9
TVP23B-202ENST00000476139 ZC3H6P61129 1189 aaKnown RBP20.64■□□□□ 0.9
TVP23B-202ENST00000476139 C19orf44Q9H6X5 657 aa20.64■□□□□ 0.9
TVP23B-202ENST00000476139 PNMA6EA0A0J9YXQ4 647 aa20.64■□□□□ 0.89
TVP23B-202ENST00000476139 CDC45O75419 566 aa20.64■□□□□ 0.89
TVP23B-202ENST00000476139 RGPD2P0DJD1 1756 aa20.64■□□□□ 0.89
TVP23B-202ENST00000476139 HMMRO75330 724 aa20.63■□□□□ 0.89
TVP23B-202ENST00000476139 RBM42Q9BTD8 480 aaKnown RBP20.63■□□□□ 0.89
TVP23B-202ENST00000476139 BTBD11A6QL63 1104 aa20.62■□□□□ 0.89
TVP23B-202ENST00000476139 ANXA1P04083 346 aa20.62■□□□□ 0.89
TVP23B-202ENST00000476139 TEFQ10587 303 aa20.62■□□□□ 0.89
TVP23B-202ENST00000476139 PLEKHO1Q53GL0 409 aaPredicted RBP20.62■□□□□ 0.89
TVP23B-202ENST00000476139 AKAP4Q5JQC9 854 aa20.62■□□□□ 0.89
TVP23B-202ENST00000476139 USP44Q9H0E7 712 aa20.62■□□□□ 0.89
TVP23B-202ENST00000476139 SDSP20132 328 aa20.61■□□□□ 0.89
TVP23B-202ENST00000476139 CHPF2Q9P2E5 772 aa20.61■□□□□ 0.89
TVP23B-202ENST00000476139 HSCBQ8IWL3 235 aa20.61■□□□□ 0.89
TVP23B-202ENST00000476139 LRRFIP2Q9Y608 721 aaKnown RBP20.61■□□□□ 0.89
TVP23B-202ENST00000476139 CD2BP2O95400 341 aaKnown RBP20.61■□□□□ 0.89
TVP23B-202ENST00000476139 C1orf167Q5SNV9 1468 aa20.61■□□□□ 0.89
TVP23B-202ENST00000476139 TSHZ3Q63HK5 1081 aa20.6■□□□□ 0.89
TVP23B-202ENST00000476139 GNAI3P08754 354 aa20.6■□□□□ 0.89
TVP23B-202ENST00000476139 GZF1Q9H116 711 aaPredicted RBP20.59■□□□□ 0.89
TVP23B-202ENST00000476139 SOS1Q07889 1333 aaPredicted RBP20.59■□□□□ 0.89
TVP23B-202ENST00000476139 RNMTO43148 476 aaKnown RBP20.58■□□□□ 0.89
TVP23B-202ENST00000476139 C1orf141Q5JVX7 400 aa20.58■□□□□ 0.89
TVP23B-202ENST00000476139 ATP8B2P98198 1209 aa20.58■□□□□ 0.89
TVP23B-202ENST00000476139 AMOTQ4VCS5 1084 aa20.58■□□□□ 0.89
TVP23B-202ENST00000476139 PXDNQ92626 1479 aa20.58■□□□□ 0.88
TVP23B-202ENST00000476139 FAM208AQ9UK61 1670 aaKnown RBP20.57■□□□□ 0.88
TVP23B-202ENST00000476139 PRAMEF22A3QJZ6 481 aa20.57■□□□□ 0.88
TVP23B-202ENST00000476139 CABLES1Q8TDN4 633 aa20.57■□□□□ 0.88
TVP23B-202ENST00000476139 FOXD4L1Q9NU39 408 aa20.57■□□□□ 0.88
TVP23B-202ENST00000476139 PI4KAP2A4QPH2 592 aa20.56■□□□□ 0.88
TVP23B-202ENST00000476139 ATF3P18847 181 aa20.56■□□□□ 0.88
TVP23B-202ENST00000476139 PDE1AP54750 535 aa20.56■□□□□ 0.88
TVP23B-202ENST00000476139 PI4KAP1Q8N8J0 262 aa20.56■□□□□ 0.88
TVP23B-202ENST00000476139 SNX21Q969T3 373 aa20.56■□□□□ 0.88
TVP23B-202ENST00000476139 UBTFL1P0CB47 393 aaPredicted RBP20.55■□□□□ 0.88
TVP23B-202ENST00000476139 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
TVP23B-202ENST00000476139 SLIT3O75094 1523 aa20.55■□□□□ 0.88
TVP23B-202ENST00000476139 NBPF7P0C2Y1 421 aaPredicted RBP20.55■□□□□ 0.88
TVP23B-202ENST00000476139 LRRCC1Q9C099 1032 aa20.54■□□□□ 0.88
TVP23B-202ENST00000476139 ERBB3P21860 1342 aa20.54■□□□□ 0.88
TVP23B-202ENST00000476139 SRCIN1Q9C0H9 1055 aa20.54■□□□□ 0.88
TVP23B-202ENST00000476139 HSPA2P54652 639 aa20.53■□□□□ 0.88
TVP23B-202ENST00000476139 USP26Q9BXU7 913 aa20.53■□□□□ 0.88
TVP23B-202ENST00000476139 PROSER3Q2NL68 480 aa20.52■□□□□ 0.88
TVP23B-202ENST00000476139 CHMP5Q9NZZ3 219 aa20.52■□□□□ 0.88
TVP23B-202ENST00000476139 PHRF1Q9P1Y6 1649 aaKnown RBP20.52■□□□□ 0.88
TVP23B-202ENST00000476139 MED1Q15648 1581 aaPredicted RBP20.52■□□□□ 0.88
TVP23B-202ENST00000476139 NLRP2Q9NX02 1062 aa20.52■□□□□ 0.88
TVP23B-202ENST00000476139 GIGYF1O75420 1035 aaPredicted RBP20.52■□□□□ 0.87
TVP23B-202ENST00000476139 OSBPL3Q9H4L5 887 aa20.52■□□□□ 0.87
TVP23B-202ENST00000476139 BEND3Q5T5X7 828 aa20.51■□□□□ 0.87
TVP23B-202ENST00000476139 DNAAF4Q8WXU2 420 aa20.51■□□□□ 0.87
TVP23B-202ENST00000476139 TRPM3Q9HCF6 1732 aaPredicted RBP20.51■□□□□ 0.87
TVP23B-202ENST00000476139 HSP90AB1P08238 724 aaKnown RBP20.51■□□□□ 0.87
TVP23B-202ENST00000476139 HOXB7P09629 217 aa20.51■□□□□ 0.87
TVP23B-202ENST00000476139 MCM4P33991 863 aa20.51■□□□□ 0.87
TVP23B-202ENST00000476139 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
TVP23B-202ENST00000476139 PPP1R42Q7Z4L9 355 aa20.5■□□□□ 0.87
TVP23B-202ENST00000476139 NCAPD2Q15021 1401 aa20.5■□□□□ 0.87
TVP23B-202ENST00000476139 CHRNA2Q15822 529 aa20.5■□□□□ 0.87
TVP23B-202ENST00000476139 IBTKQ9P2D0 1353 aaPredicted RBP20.5■□□□□ 0.87
TVP23B-202ENST00000476139 SALL3Q9BXA9 1300 aa20.49■□□□□ 0.87
TVP23B-202ENST00000476139 DDIT3P35638 169 aa20.49■□□□□ 0.87
TVP23B-202ENST00000476139 MST1RQ04912 1400 aa20.49■□□□□ 0.87
TVP23B-202ENST00000476139 MX1P20591 662 aa20.49■□□□□ 0.87
TVP23B-202ENST00000476139 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
TVP23B-202ENST00000476139 DBF4Q9UBU7 674 aaPredicted RBP20.49■□□□□ 0.87
TVP23B-202ENST00000476139 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
TVP23B-202ENST00000476139 ADCY9O60503 1353 aa20.48■□□□□ 0.87
TVP23B-202ENST00000476139 CASC1Q6TDU7 716 aa20.48■□□□□ 0.87
TVP23B-202ENST00000476139 SSH3Q8TE77 659 aa20.48■□□□□ 0.87
TVP23B-202ENST00000476139 LMO7Q8WWI1 1683 aa20.47■□□□□ 0.87
TVP23B-202ENST00000476139 RGPD5Q99666 1765 aa20.47■□□□□ 0.87
TVP23B-202ENST00000476139 SRGAP3O43295 1099 aa20.47■□□□□ 0.87
TVP23B-202ENST00000476139 SURF6O75683 361 aaKnown RBP20.47■□□□□ 0.87
TVP23B-202ENST00000476139 RAPGEF4Q8WZA2 1011 aa20.47■□□□□ 0.87
TVP23B-202ENST00000476139 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
TVP23B-202ENST00000476139 K7ELQ4 463 aaPredicted RBP20.46■□□□□ 0.87
TVP23B-202ENST00000476139 KDM3BQ7LBC6 1761 aa20.46■□□□□ 0.87
TVP23B-202ENST00000476139 PXDNLA1KZ92 1463 aa20.46■□□□□ 0.87
TVP23B-202ENST00000476139 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
TVP23B-202ENST00000476139 MAP3K2Q9Y2U5 619 aa20.46■□□□□ 0.87
TVP23B-202ENST00000476139 NUTM1Q86Y26 1132 aa20.46■□□□□ 0.87
TVP23B-202ENST00000476139 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.86
TVP23B-202ENST00000476139 NFATC2IPQ8NCF5 419 aa20.45■□□□□ 0.86
TVP23B-202ENST00000476139 RILPL2Q969X0 211 aa20.45■□□□□ 0.86
TVP23B-202ENST00000476139 UNC5CLQ8IV45 518 aa20.45■□□□□ 0.86
TVP23B-202ENST00000476139 TRIM6-TRIM34B2RNG4 842 aa20.44■□□□□ 0.86
TVP23B-202ENST00000476139 AIMP1Q12904 312 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms