RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
SEMA3C-208ENST00000475955 KDM6AO15550 1401 aaPredicted RBP12.65□□□□□ -0.38
SEMA3C-208ENST00000475955 RALBP1Q15311 655 aa12.65□□□□□ -0.38
SEMA3C-208ENST00000475955 SULT6B1Q6IMI4 303 aa12.65□□□□□ -0.38
SEMA3C-208ENST00000475955 MTFR1LQ9H019 292 aa12.64□□□□□ -0.39
SEMA3C-208ENST00000475955 ASAP1Q9ULH1 1129 aa12.64□□□□□ -0.39
SEMA3C-208ENST00000475955 PLEKHO1Q53GL0 409 aaPredicted RBP12.63□□□□□ -0.39
SEMA3C-208ENST00000475955 AMIGO3Q86WK7 504 aa12.63□□□□□ -0.39
SEMA3C-208ENST00000475955 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
SEMA3C-208ENST00000475955 COL5A3P25940 1745 aaPredicted RBP12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 ZNF831Q5JPB2 1677 aa12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 HMOX1P09601 288 aa12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 COL23A1Q86Y22 540 aaPredicted RBP12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 ATG3Q9NT62 314 aa12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 TMOD3Q9NYL9 352 aa12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 TFCP2L1Q9NZI6 479 aa12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
SEMA3C-208ENST00000475955 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
SEMA3C-208ENST00000475955 AMOTQ4VCS5 1084 aa12.61□□□□□ -0.39
SEMA3C-208ENST00000475955 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
SEMA3C-208ENST00000475955 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
SEMA3C-208ENST00000475955 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
SEMA3C-208ENST00000475955 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
SEMA3C-208ENST00000475955 DIAPH1O60610 1272 aaKnown RBP12.6□□□□□ -0.39
SEMA3C-208ENST00000475955 SIK1P57059 783 aa12.6□□□□□ -0.39
SEMA3C-208ENST00000475955 ITPK1Q13572 414 aa12.6□□□□□ -0.39
SEMA3C-208ENST00000475955 LINC00116Q8NCU8 138 aa12.6□□□□□ -0.39
SEMA3C-208ENST00000475955 DCAF5Q96JK2 942 aa12.6□□□□□ -0.39
SEMA3C-208ENST00000475955 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
SEMA3C-208ENST00000475955 MYBBP1AQ9BQG0 1328 aaKnown RBP12.6□□□□□ -0.39
SEMA3C-208ENST00000475955 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
SEMA3C-208ENST00000475955 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
SEMA3C-208ENST00000475955 SLC16A10Q8TF71 515 aa12.59□□□□□ -0.39
SEMA3C-208ENST00000475955 FHDC1Q9C0D6 1143 aaPredicted RBP12.59□□□□□ -0.39
SEMA3C-208ENST00000475955 TJP1Q07157 1748 aa12.59□□□□□ -0.39
SEMA3C-208ENST00000475955 PNISRQ8TF01 805 aaKnown RBP12.58□□□□□ -0.4
SEMA3C-208ENST00000475955 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
SEMA3C-208ENST00000475955 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
SEMA3C-208ENST00000475955 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
SEMA3C-208ENST00000475955 ARXQ96QS3 562 aa12.57□□□□□ -0.4
SEMA3C-208ENST00000475955 SYT17Q9BSW7 474 aa12.57□□□□□ -0.4
SEMA3C-208ENST00000475955 LGR6Q9HBX8 967 aa12.57□□□□□ -0.4
SEMA3C-208ENST00000475955 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
SEMA3C-208ENST00000475955 PPP2R1AP30153 589 aa12.56□□□□□ -0.4
SEMA3C-208ENST00000475955 ATP6V1AP38606 617 aa12.56□□□□□ -0.4
SEMA3C-208ENST00000475955 CABP4P57796 275 aa12.56□□□□□ -0.4
SEMA3C-208ENST00000475955 C1orf141Q5JVX7 400 aa12.56□□□□□ -0.4
SEMA3C-208ENST00000475955 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
SEMA3C-208ENST00000475955 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
SEMA3C-208ENST00000475955 MRC1P22897 1456 aa12.55□□□□□ -0.4
SEMA3C-208ENST00000475955 C4AP0C0L4 1744 aa12.55□□□□□ -0.4
SEMA3C-208ENST00000475955 MSH5O43196 834 aa12.55□□□□□ -0.4
SEMA3C-208ENST00000475955 AKAP4Q5JQC9 854 aa12.55□□□□□ -0.4
SEMA3C-208ENST00000475955 MSL1Q68DK7 614 aa12.55□□□□□ -0.4
SEMA3C-208ENST00000475955 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
SEMA3C-208ENST00000475955 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
SEMA3C-208ENST00000475955 RNMTO43148 476 aaKnown RBP12.54□□□□□ -0.4
SEMA3C-208ENST00000475955 AK7Q96M32 723 aa12.54□□□□□ -0.4
SEMA3C-208ENST00000475955 CHD4Q14839 1912 aa12.54□□□□□ -0.4
SEMA3C-208ENST00000475955 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
SEMA3C-208ENST00000475955 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
SEMA3C-208ENST00000475955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
SEMA3C-208ENST00000475955 PHF14O94880 888 aa12.53□□□□□ -0.4
SEMA3C-208ENST00000475955 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
SEMA3C-208ENST00000475955 B4GALNT3Q6L9W6 998 aa12.53□□□□□ -0.4
SEMA3C-208ENST00000475955 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
SEMA3C-208ENST00000475955 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
SEMA3C-208ENST00000475955 PHACTR3Q96KR7 559 aa12.52□□□□□ -0.41
SEMA3C-208ENST00000475955 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
SEMA3C-208ENST00000475955 SLC52A2Q9HAB3 445 aa12.52□□□□□ -0.41
SEMA3C-208ENST00000475955 UTRNP46939 3433 aa12.52□□□□□ -0.41
SEMA3C-208ENST00000475955 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.41
SEMA3C-208ENST00000475955 GNPATO15228 680 aa12.51□□□□□ -0.41
SEMA3C-208ENST00000475955 SSFA2P28290 1259 aa12.51□□□□□ -0.41
SEMA3C-208ENST00000475955 POLD1P28340 1107 aa12.51□□□□□ -0.41
SEMA3C-208ENST00000475955 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
SEMA3C-208ENST00000475955 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
SEMA3C-208ENST00000475955 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
SEMA3C-208ENST00000475955 NOP58Q9Y2X3 529 aaKnown RBP12.51□□□□□ -0.41
SEMA3C-208ENST00000475955 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
SEMA3C-208ENST00000475955 CNTNAP4Q9C0A0 1308 aa12.49□□□□□ -0.41
SEMA3C-208ENST00000475955 HMGB2P26583 209 aaKnown RBP12.49□□□□□ -0.41
SEMA3C-208ENST00000475955 PRKAR2BP31323 418 aa12.49□□□□□ -0.41
SEMA3C-208ENST00000475955 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
SEMA3C-208ENST00000475955 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
SEMA3C-208ENST00000475955 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
SEMA3C-208ENST00000475955 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
SEMA3C-208ENST00000475955 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
SEMA3C-208ENST00000475955 GOLGB1Q14789 3259 aaKnown RBP12.48□□□□□ -0.41
SEMA3C-208ENST00000475955 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
SEMA3C-208ENST00000475955 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
SEMA3C-208ENST00000475955 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
SEMA3C-208ENST00000475955 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
SEMA3C-208ENST00000475955 MS4A1P11836 297 aa12.47□□□□□ -0.41
SEMA3C-208ENST00000475955 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
SEMA3C-208ENST00000475955 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEMA3C-208ENST00000475955 INTS5Q6P9B9 1019 aaKnown RBP12.47□□□□□ -0.41
SEMA3C-208ENST00000475955 DNAJC10Q8IXB1 793 aa12.47□□□□□ -0.41
SEMA3C-208ENST00000475955 ARHGEF1Q92888 912 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms