RNA–Protein interactions for RNA: ENST00000475869.2

NBPF3-208, Transcript of NBPF member 3, human

TSL 5

Gene NBPF3, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBPF3-208	ENST00000475869	HMOX1	P09601	288 aa		33.37	■■■□□ 2.93
NBPF3-208	ENST00000475869	LINC00116	Q8NCU8	138 aa		33.36	■■■□□ 2.93
NBPF3-208	ENST00000475869	AK7	Q96M32	723 aa		33.36	■■■□□ 2.93
NBPF3-208	ENST00000475869	VIRMA	Q69YN4	1812 aa	Known RBP	33.35	■■■□□ 2.93
NBPF3-208	ENST00000475869	POLD1	P28340	1107 aa		33.35	■■■□□ 2.93
NBPF3-208	ENST00000475869	ITPK1	Q13572	414 aa		33.35	■■■□□ 2.93
NBPF3-208	ENST00000475869	FLAD1	Q8NFF5	587 aa		33.35	■■■□□ 2.93
NBPF3-208	ENST00000475869	CABP4	P57796	275 aa		33.34	■■■□□ 2.93
NBPF3-208	ENST00000475869	AMIGO3	Q86WK7	504 aa		33.34	■■■□□ 2.93
NBPF3-208	ENST00000475869	ATP6V1A	P38606	617 aa		33.33	■■■□□ 2.93
NBPF3-208	ENST00000475869	COL5A3	P25940	1745 aa	Predicted RBP	33.31	■■■□□ 2.92
NBPF3-208	ENST00000475869	DCAF8L1	A6NGE4	600 aa		33.31	■■■□□ 2.92
NBPF3-208	ENST00000475869	AKAP4	Q5JQC9	854 aa		33.31	■■■□□ 2.92
NBPF3-208	ENST00000475869	SLC4A9	Q96Q91	983 aa		33.29	■■■□□ 2.92
NBPF3-208	ENST00000475869	MSL1	Q68DK7	614 aa		33.28	■■■□□ 2.92
NBPF3-208	ENST00000475869	NFATC2IP	Q8NCF5	419 aa		33.28	■■■□□ 2.92
NBPF3-208	ENST00000475869	ADAMTS7	Q9UKP4	1686 aa		33.28	■■■□□ 2.92
NBPF3-208	ENST00000475869	SMIM5	Q71RC9	77 aa		33.27	■■■□□ 2.92
NBPF3-208	ENST00000475869	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.26	■■■□□ 2.91
NBPF3-208	ENST00000475869	PHF14	O94880	888 aa		33.26	■■■□□ 2.91
NBPF3-208	ENST00000475869	SSFA2	P28290	1259 aa		33.26	■■■□□ 2.91
NBPF3-208	ENST00000475869	RBM42	Q9BTD8	480 aa	Known RBP	33.26	■■■□□ 2.91
NBPF3-208	ENST00000475869	MRC1	P22897	1456 aa		33.25	■■■□□ 2.91
NBPF3-208	ENST00000475869	MTHFSD	Q2M296	383 aa	Known RBP	33.25	■■■□□ 2.91
NBPF3-208	ENST00000475869	U2SURP	O15042	1029 aa	Known RBP	33.24	■■■□□ 2.91
NBPF3-208	ENST00000475869	GNPAT	O15228	680 aa		33.23	■■■□□ 2.91
NBPF3-208	ENST00000475869	LGR6	Q9HBX8	967 aa		33.23	■■■□□ 2.91
NBPF3-208	ENST00000475869	CIC	Q96RK0	1608 aa	Predicted RBP	33.23	■■■□□ 2.91
NBPF3-208	ENST00000475869	KLHL34	Q8N239	644 aa		33.22	■■■□□ 2.91
NBPF3-208	ENST00000475869	PPP2R1A	P30153	589 aa		33.21	■■■□□ 2.91
NBPF3-208	ENST00000475869	CFAP53	Q96M91	514 aa		33.21	■■■□□ 2.91
NBPF3-208	ENST00000475869	TJP1	Q07157	1748 aa		33.21	■■■□□ 2.91
NBPF3-208	ENST00000475869	RNMT	O43148	476 aa	Known RBP	33.2	■■■□□ 2.91
NBPF3-208	ENST00000475869	SLC52A2	Q9HAB3	445 aa		33.2	■■■□□ 2.91
NBPF3-208	ENST00000475869	UTRN	P46939	3433 aa		33.2	■■■□□ 2.91
NBPF3-208	ENST00000475869	MYH14	Q7Z406	1995 aa	Known RBP	33.2	■■■□□ 2.9
NBPF3-208	ENST00000475869	PTCD1	O75127	700 aa	Known RBP	33.18	■■■□□ 2.9
NBPF3-208	ENST00000475869	RC3H1	Q5TC82	1133 aa	Known RBP	33.17	■■■□□ 2.9
NBPF3-208	ENST00000475869	CNTNAP4	Q9C0A0	1308 aa		33.17	■■■□□ 2.9
NBPF3-208	ENST00000475869	NLGN2	Q8NFZ4	835 aa		33.15	■■■□□ 2.9
NBPF3-208	ENST00000475869	YY1	P25490	414 aa		33.14	■■■□□ 2.9
NBPF3-208	ENST00000475869	RTCB	Q9Y3I0	505 aa	Known RBP	33.13	■■■□□ 2.89
NBPF3-208	ENST00000475869	GOLGB1	Q14789	3259 aa	Known RBP	33.12	■■■□□ 2.89
NBPF3-208	ENST00000475869	C4A	P0C0L4	1744 aa		33.11	■■■□□ 2.89
NBPF3-208	ENST00000475869	GAS2L2	Q8NHY3	880 aa		33.11	■■■□□ 2.89
NBPF3-208	ENST00000475869	RSPH6A	Q9H0K4	717 aa		33.11	■■■□□ 2.89
NBPF3-208	ENST00000475869	NUDC	Q9Y266	331 aa		33.1	■■■□□ 2.89
NBPF3-208	ENST00000475869	KCP	Q6ZWJ8	1503 aa		33.1	■■■□□ 2.89
NBPF3-208	ENST00000475869	SIPA1L3	O60292	1781 aa	Predicted RBP	33.1	■■■□□ 2.89
NBPF3-208	ENST00000475869	UBR2	Q8IWV8	1755 aa		33.1	■■■□□ 2.89
NBPF3-208	ENST00000475869	CHD4	Q14839	1912 aa		33.09	■■■□□ 2.89
NBPF3-208	ENST00000475869	TRAPPC3L	Q5T215	181 aa		33.09	■■■□□ 2.89
NBPF3-208	ENST00000475869	RPS6KA4	O75676	772 aa		33.08	■■■□□ 2.89
NBPF3-208	ENST00000475869	ADRA2B	P18089	450 aa		33.08	■■■□□ 2.89
NBPF3-208	ENST00000475869	PRKAR2B	P31323	418 aa		33.08	■■■□□ 2.89
NBPF3-208	ENST00000475869	GNAT3	A8MTJ3	354 aa		33.07	■■■□□ 2.88
NBPF3-208	ENST00000475869	CRKL	P46109	303 aa	Known RBP	33.07	■■■□□ 2.88
NBPF3-208	ENST00000475869	SLC39A6	Q13433	755 aa		33.07	■■■□□ 2.88
NBPF3-208	ENST00000475869	PHACTR3	Q96KR7	559 aa		33.07	■■■□□ 2.88
NBPF3-208	ENST00000475869	CD2AP	Q9Y5K6	639 aa		33.07	■■■□□ 2.88
NBPF3-208	ENST00000475869	ARHGEF1	Q92888	912 aa	Known RBP	33.06	■■■□□ 2.88
NBPF3-208	ENST00000475869	GPR162	Q16538	588 aa		33.05	■■■□□ 2.88
NBPF3-208	ENST00000475869	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.04	■■■□□ 2.88
NBPF3-208	ENST00000475869	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.04	■■■□□ 2.88
NBPF3-208	ENST00000475869	IL17RE	Q8NFR9	667 aa		33.04	■■■□□ 2.88
NBPF3-208	ENST00000475869	DNAJC10	Q8IXB1	793 aa		33.02	■■■□□ 2.88
NBPF3-208	ENST00000475869	INTS5	Q6P9B9	1019 aa	Known RBP	33.01	■■■□□ 2.87
NBPF3-208	ENST00000475869	RFC4	P35249	363 aa		33	■■■□□ 2.87
NBPF3-208	ENST00000475869	PELP1	Q8IZL8	1130 aa	Known RBP	33	■■■□□ 2.87
NBPF3-208	ENST00000475869	CEMIP	Q8WUJ3	1361 aa		32.99	■■■□□ 2.87
NBPF3-208	ENST00000475869	FCHSD2	O94868	740 aa		32.99	■■■□□ 2.87
NBPF3-208	ENST00000475869	MMP10	P09238	476 aa		32.99	■■■□□ 2.87
NBPF3-208	ENST00000475869	GYS1	P13807	737 aa		32.98	■■■□□ 2.87
NBPF3-208	ENST00000475869	TEF	Q10587	303 aa		32.98	■■■□□ 2.87
NBPF3-208	ENST00000475869	NLGN1	Q8N2Q7	840 aa		32.98	■■■□□ 2.87
NBPF3-208	ENST00000475869	KIF13B	Q9NQT8	1826 aa		32.98	■■■□□ 2.87
NBPF3-208	ENST00000475869	CYP19A1	P11511	503 aa	Predicted RBP	32.97	■■■□□ 2.87
NBPF3-208	ENST00000475869	CCDC87	Q9NVE4	849 aa		32.97	■■■□□ 2.87
NBPF3-208	ENST00000475869	VSIG10	Q8N0Z9	540 aa		32.96	■■■□□ 2.87
NBPF3-208	ENST00000475869	YBX3	P16989	372 aa	Known RBP eCLIP	32.95	■■■□□ 2.87
NBPF3-208	ENST00000475869	TTC5	Q8N0Z6	440 aa		32.94	■■■□□ 2.86
NBPF3-208	ENST00000475869	USP42	Q9H9J4	1324 aa	Known RBP	32.93	■■■□□ 2.86
NBPF3-208	ENST00000475869	ZNF790	Q6PG37	636 aa		32.92	■■■□□ 2.86
NBPF3-208	ENST00000475869	SRP68	Q9UHB9	627 aa	Known RBP	32.92	■■■□□ 2.86
NBPF3-208	ENST00000475869	SOS1	Q07889	1333 aa	Predicted RBP	32.92	■■■□□ 2.86
NBPF3-208	ENST00000475869	KIAA1551	Q9HCM1	1747 aa		32.91	■■■□□ 2.86
NBPF3-208	ENST00000475869	ZNF496	Q96IT1	587 aa	Predicted RBP	32.9	■■■□□ 2.86
NBPF3-208	ENST00000475869	DDX10	Q13206	875 aa	Known RBP	32.89	■■■□□ 2.86
NBPF3-208	ENST00000475869	ZBTB1	Q9Y2K1	713 aa		32.88	■■■□□ 2.85
NBPF3-208	ENST00000475869	DLG5	Q8TDM6	1919 aa		32.88	■■■□□ 2.85
NBPF3-208	ENST00000475869	C10orf71	Q711Q0	1435 aa		32.87	■■■□□ 2.85
NBPF3-208	ENST00000475869	HEG1	Q9ULI3	1381 aa		32.87	■■■□□ 2.85
NBPF3-208	ENST00000475869	GRIN3B	O60391	1043 aa		32.87	■■■□□ 2.85
NBPF3-208	ENST00000475869	FKBP8	Q14318	412 aa		32.86	■■■□□ 2.85
NBPF3-208	ENST00000475869	RALBP1	Q15311	655 aa		32.86	■■■□□ 2.85
NBPF3-208	ENST00000475869	COL15A1	P39059	1388 aa		32.85	■■■□□ 2.85
NBPF3-208	ENST00000475869	MCM10	Q7L590	875 aa		32.85	■■■□□ 2.85
NBPF3-208	ENST00000475869	RTF1	Q92541	710 aa	Known RBP	32.85	■■■□□ 2.85
NBPF3-208	ENST00000475869	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.85	■■■□□ 2.85
NBPF3-208	ENST00000475869	BTBD11	A6QL63	1104 aa		32.84	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms