RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 MPRIPQ6WCQ1 1025 aa9.97□□□□□ -0.81
UBE4B-208ENST00000475795 NLGN2Q8NFZ4 835 aa9.97□□□□□ -0.81
UBE4B-208ENST00000475795 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-208ENST00000475795 SMARCC1Q92922 1105 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-208ENST00000475795 MSL1Q68DK7 614 aa9.95□□□□□ -0.82
UBE4B-208ENST00000475795 FLAD1Q8NFF5 587 aa9.95□□□□□ -0.82
UBE4B-208ENST00000475795 PIGBQ92521 554 aa9.95□□□□□ -0.82
UBE4B-208ENST00000475795 EYA1Q99502 592 aa9.95□□□□□ -0.82
UBE4B-208ENST00000475795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.95□□□□□ -0.821e-6■■□□□ 12.8
UBE4B-208ENST00000475795 POLKQ9UBT6 870 aa9.95□□□□□ -0.82
UBE4B-208ENST00000475795 SPG7Q9UQ90 795 aa9.95□□□□□ -0.82
UBE4B-208ENST00000475795 GOLGB1Q14789 3259 aaKnown RBP9.95□□□□□ -0.82
UBE4B-208ENST00000475795 PLEKHG2Q9H7P9 1386 aa9.94□□□□□ -0.82
UBE4B-208ENST00000475795 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
UBE4B-208ENST00000475795 AMIGO3Q86WK7 504 aa9.93□□□□□ -0.82
UBE4B-208ENST00000475795 IFNL2Q8IZJ0 200 aa9.93□□□□□ -0.82
UBE4B-208ENST00000475795 AK7Q96M32 723 aa9.93□□□□□ -0.82
UBE4B-208ENST00000475795 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
UBE4B-208ENST00000475795 PCGF6Q9BYE7 350 aa9.93□□□□□ -0.82
UBE4B-208ENST00000475795 FBXO3Q9UK99 471 aa9.93□□□□□ -0.82
UBE4B-208ENST00000475795 ZNF831Q5JPB2 1677 aa9.93□□□□□ -0.82
UBE4B-208ENST00000475795 LOC102724428A0A0B4J2F2 783 aa9.92□□□□□ -0.82
UBE4B-208ENST00000475795 GRIN3BO60391 1043 aa9.92□□□□□ -0.82
UBE4B-208ENST00000475795 PHKG2P15735 406 aa9.92□□□□□ -0.82
UBE4B-208ENST00000475795 YBX3P16989 372 aaKnown RBP eCLIP9.92□□□□□ -0.82
UBE4B-208ENST00000475795 SIK1P57059 783 aa9.92□□□□□ -0.82
UBE4B-208ENST00000475795 EIF4A2Q14240 407 aaKnown RBP9.92□□□□□ -0.82
UBE4B-208ENST00000475795 TMOD3Q9NYL9 352 aa9.92□□□□□ -0.82
UBE4B-208ENST00000475795 CD2APQ9Y5K6 639 aa9.92□□□□□ -0.82
UBE4B-208ENST00000475795 COL5A3P25940 1745 aaPredicted RBP9.92□□□□□ -0.82
UBE4B-208ENST00000475795 IGSF1Q8N6C5 1336 aa9.91□□□□□ -0.82
UBE4B-208ENST00000475795 HSPA5P11021 654 aaKnown RBP9.91□□□□□ -0.82
UBE4B-208ENST00000475795 SSFA2P28290 1259 aa9.91□□□□□ -0.82
UBE4B-208ENST00000475795 TNNT2P45379 298 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-208ENST00000475795 EIF4G2P78344 907 aaKnown RBP eCLIP9.91□□□□□ -0.824e-6■□□□□ 10.7
UBE4B-208ENST00000475795 LINC00116Q8NCU8 138 aa9.91□□□□□ -0.82
UBE4B-208ENST00000475795 ASAP1Q9ULH1 1129 aa9.91□□□□□ -0.82
UBE4B-208ENST00000475795 KIF13BQ9NQT8 1826 aa9.91□□□□□ -0.82
UBE4B-208ENST00000475795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.9□□□□□ -0.82
UBE4B-208ENST00000475795 PHF14O94880 888 aa9.9□□□□□ -0.82
UBE4B-208ENST00000475795 C1QTNF8P60827 252 aa9.9□□□□□ -0.82
UBE4B-208ENST00000475795 ITPK1Q13572 414 aa9.9□□□□□ -0.82
UBE4B-208ENST00000475795 PANK3Q9H999 370 aa9.9□□□□□ -0.82
UBE4B-208ENST00000475795 MYH14Q7Z406 1995 aaKnown RBP9.9□□□□□ -0.83
UBE4B-208ENST00000475795 KDRP35968 1356 aa9.89□□□□□ -0.83
UBE4B-208ENST00000475795 VIRMAQ69YN4 1812 aaKnown RBP9.89□□□□□ -0.83
UBE4B-208ENST00000475795 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
UBE4B-208ENST00000475795 SMIM5Q71RC9 77 aa9.89□□□□□ -0.83
UBE4B-208ENST00000475795 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
UBE4B-208ENST00000475795 ATG3Q9NT62 314 aa9.89□□□□□ -0.83
UBE4B-208ENST00000475795 SCN11AQ9UI33 1791 aa9.88□□□□□ -0.83
UBE4B-208ENST00000475795 KIAA1551Q9HCM1 1747 aa9.88□□□□□ -0.83
UBE4B-208ENST00000475795 ERVV-2B6SEH9 535 aa9.88□□□□□ -0.83
UBE4B-208ENST00000475795 GNPATO15228 680 aa9.88□□□□□ -0.83
UBE4B-208ENST00000475795 GIGYF1O75420 1035 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-208ENST00000475795 KDM6AO15550 1401 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-208ENST00000475795 C4AP0C0L4 1744 aa9.87□□□□□ -0.83
UBE4B-208ENST00000475795 SENP3-EIF4A1A0A087X0R7 540 aa9.87□□□□□ -0.83
UBE4B-208ENST00000475795 HSP90AB1P08238 724 aaKnown RBP9.87□□□□□ -0.83
UBE4B-208ENST00000475795 PRKAR2AP13861 404 aaKnown RBP9.87□□□□□ -0.83
UBE4B-208ENST00000475795 PLEKHO1Q53GL0 409 aaPredicted RBP9.87□□□□□ -0.83
UBE4B-208ENST00000475795 CHADLQ6NUI6 762 aa9.87□□□□□ -0.83
UBE4B-208ENST00000475795 DCAF5Q96JK2 942 aa9.87□□□□□ -0.83
UBE4B-208ENST00000475795 N4BP2Q86UW6 1770 aaPredicted RBP9.87□□□□□ -0.83
UBE4B-208ENST00000475795 CICQ96RK0 1608 aaPredicted RBP9.86□□□□□ -0.83
UBE4B-208ENST00000475795 BRCA1P38398 1863 aaKnown RBP9.86□□□□□ -0.83
UBE4B-208ENST00000475795 AMOTQ4VCS5 1084 aa9.86□□□□□ -0.83
UBE4B-208ENST00000475795 ZNF530Q6P9A1 599 aaPredicted RBP9.86□□□□□ -0.83
UBE4B-208ENST00000475795 MORC1Q86VD1 984 aa9.86□□□□□ -0.83
UBE4B-208ENST00000475795 MIER1Q8N108 512 aa9.86□□□□□ -0.83
UBE4B-208ENST00000475795 PLCD3Q8N3E9 789 aa9.86□□□□□ -0.83
UBE4B-208ENST00000475795 SLC4A9Q96Q91 983 aa9.86□□□□□ -0.83
UBE4B-208ENST00000475795 ATP10DQ9P241 1426 aa9.86□□□□□ -0.83
UBE4B-208ENST00000475795 ADCY9O60503 1353 aa9.86□□□□□ -0.83
UBE4B-208ENST00000475795 TJP1Q07157 1748 aa9.85□□□□□ -0.83
UBE4B-208ENST00000475795 FXR2P51116 673 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■■■■□ 24.7
UBE4B-208ENST00000475795 AEBP1Q8IUX7 1158 aa9.85□□□□□ -0.83
UBE4B-208ENST00000475795 CNTNAP4Q9C0A0 1308 aa9.84□□□□□ -0.83
UBE4B-208ENST00000475795 MMP10P09238 476 aa9.84□□□□□ -0.83
UBE4B-208ENST00000475795 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
UBE4B-208ENST00000475795 RC3H1Q5TC82 1133 aaKnown RBP9.84□□□□□ -0.83
UBE4B-208ENST00000475795 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
UBE4B-208ENST00000475795 KNSTRNQ9Y448 316 aa9.84□□□□□ -0.83
UBE4B-208ENST00000475795 PXDNLA1KZ92 1463 aa9.84□□□□□ -0.83
UBE4B-208ENST00000475795 IL13P35225 146 aa9.83□□□□□ -0.84
UBE4B-208ENST00000475795 MTHFSP49914 203 aa9.83□□□□□ -0.84
UBE4B-208ENST00000475795 CABP4P57796 275 aa9.83□□□□□ -0.84
UBE4B-208ENST00000475795 C1orf141Q5JVX7 400 aa9.83□□□□□ -0.84
UBE4B-208ENST00000475795 SULT6B1Q6IMI4 303 aa9.83□□□□□ -0.84
UBE4B-208ENST00000475795 CCER1Q8TC90 406 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-208ENST00000475795 ARFGEF1Q9Y6D6 1849 aa9.83□□□□□ -0.84
UBE4B-208ENST00000475795 C10orf71Q711Q0 1435 aa9.82□□□□□ -0.84
UBE4B-208ENST00000475795 RPS6KA4O75676 772 aa9.82□□□□□ -0.84
UBE4B-208ENST00000475795 AMER1Q5JTC6 1135 aaPredicted RBP9.82□□□□□ -0.84
UBE4B-208ENST00000475795 POTEHQ6S545 545 aa9.82□□□□□ -0.84
UBE4B-208ENST00000475795 NLGN1Q8N2Q7 840 aa9.82□□□□□ -0.84
UBE4B-208ENST00000475795 ARHGEF1Q92888 912 aaKnown RBP9.82□□□□□ -0.84
UBE4B-208ENST00000475795 WWC3Q9ULE0 1092 aa9.82□□□□□ -0.84
UBE4B-208ENST00000475795 ADAMTS7Q9UKP4 1686 aa9.82□□□□□ -0.84
UBE4B-208ENST00000475795 MRC1P22897 1456 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms